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PDB: 200 results

2XM5
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Structural and Mechanistic Analysis of the Magnesium-Independent Aromatic Prenyltransferase CloQ from the Clorobiocin Biosynthetic Pathway
Descriptor: 1,2-ETHANEDIOL, CLOQ, FORMIC ACID
Authors:Metzger, U, Keller, S, Stevenson, C.E.M, Heide, L, Lawson, D.M.
Deposit date:2010-07-23
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Mechanism of the Magnesium-Independent Aromatic Prenyltransferase Cloq from the Clorobiocin Biosynthetic Pathway.
J.Mol.Biol., 404, 2010
2XM7
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BU of 2xm7 by Molmil
Structural and Mechanistic Analysis of the Magnesium-Independent Aromatic Prenyltransferase CloQ from the Clorobiocin Biosynthetic Pathway
Descriptor: (2R)-2-HYDROXY-3-(4-HYDROXYPHENYL)PROPANOIC ACID, 1,2-ETHANEDIOL, CLOQ, ...
Authors:Metzger, U, Keller, S, Stevenson, C.E.M, Heide, L, Lawson, D.M.
Deposit date:2010-07-25
Release date:2010-10-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and Mechanism of the Magnesium-Independent Aromatic Prenyltransferase Cloq from the Clorobiocin Biosynthetic Pathway.
J.Mol.Biol., 404, 2010
2Y31
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Simocyclinone C4 bound form of TetR-like repressor SimR
Descriptor: CALCIUM ION, CHLORIDE ION, PENTAETHYLENE GLYCOL, ...
Authors:Le, T.B.K, Stevenson, C.E.M, Fiedler, H.-P, Maxwell, A, Lawson, D.M, Buttner, M.J.
Deposit date:2010-12-17
Release date:2011-03-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the Tetr-Like Simocyclinone Efflux Pump Repressor, Simr, and the Mechanism of Ligand-Mediated Derepression.
J.Mol.Biol., 408, 2011
7QYR
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BU of 7qyr by Molmil
Crystal structure of RimK from Pseudomonas aeruginosa PAO1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Probable alpha-L-glutamate ligase, poly-glutamate
Authors:Thompson, C.M.A, Little, R.H, Stevenson, C.E.M, Lawson, D.M, Malone, J.G.
Deposit date:2022-01-29
Release date:2022-10-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the mechanism of adaptive ribosomal modification by Pseudomonas RimK.
Proteins, 91, 2023
7QYS
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Crystal structure of RimK from Pseudomonas syringae DC3000
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Probable alpha-L-glutamate ligase
Authors:Thompson, C.M.A, Little, R.H, Stevenson, C.E.M, Lawson, D.M, Malone, J.G.
Deposit date:2022-01-29
Release date:2022-10-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insights into the mechanism of adaptive ribosomal modification by Pseudomonas RimK.
Proteins, 91, 2023
2Y3P
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BU of 2y3p by Molmil
Crystal structure of N-terminal domain of GyrA with the antibiotic simocyclinone D8
Descriptor: DNA GYRASE SUBUNIT A, MAGNESIUM ION, SIMOCYCLINONE D8
Authors:Edwards, M.J, Flatman, R.H, Mitchenall, L.A, Stevenson, C.E.M, Le, T.B.K, Clarke, T.A, McKay, A.R, Fiedler, H.-P, Buttner, M.J, Lawson, D.M, Maxwell, A.
Deposit date:2010-12-22
Release date:2010-12-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:A Crystal Structure of the Bifunctional Antibiotic Simocyclinone D8, Bound to DNA Gyrase.
Science, 326, 2009
8PFD
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BU of 8pfd by Molmil
Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the von Willebrand Factor Type A domain of the proteasomal ubiquitin receptor Rpn10 from Arabidopsis thaliana
Descriptor: 26S proteasome non-ATPase regulatory subunit 4 homolog, Sequence-variable mosaic (SVM) signal sequence domain-containing protein
Authors:Huang, W, Liu, Q, Maqbool, A, Stevenson, C.E.M, Lawson, D.M, Kamoun, S, Hogenhout, S.A.
Deposit date:2023-06-15
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.
Proc.Natl.Acad.Sci.USA, 120, 2023
2XFR
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Crystal structure of barley beta-amylase at atomic resolution
Descriptor: 1,2-ETHANEDIOL, BETA-AMYLASE
Authors:Rejzek, M, Stevenson, C.E.M, Southard, A.M, Stanley, D, Denyer, K, Smith, A.M, Naldrett, M.J, Lawson, D.M, Field, R.A.
Deposit date:2010-05-28
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Chemical Genetics and Cereal Starch Metabolism: Structural Basis of the Non-Covalent and Covalent Inhibition of Barley Beta-Amylase.
Mol.Biosyst., 7, 2011
8PFC
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Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the zinc finger domain of SPL5 from Arabidopsis thaliana
Descriptor: Sequence-variable mosaic (SVM) signal sequence domain-containing protein, Squamosa promoter-binding-like protein 5, ZINC ION
Authors:Huang, W, Liu, Q, Maqbool, A, Stevenson, C.E.M, Lawson, D.M, Kamoun, S, Hogenhout, S.A.
Deposit date:2023-06-15
Release date:2023-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.
Proc.Natl.Acad.Sci.USA, 120, 2023
7ANM
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BU of 7anm by Molmil
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
Descriptor: p70
Authors:Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2020-10-12
Release date:2021-08-25
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ATA
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Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
Descriptor: p70
Authors:Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2020-10-29
Release date:2021-08-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (6.63 Å)
Cite:Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
2XGB
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BU of 2xgb by Molmil
Crystal structure of Barley Beta-Amylase complexed with 2,3- epoxypropyl-alpha-D-glucopyranoside
Descriptor: (2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside, 1,2-ETHANEDIOL, BETA-AMYLASE
Authors:Rejzek, M, Stevenson, C.E.M, Southard, A.M, Stanley, D, Denyer, K, Smith, A.M, Naldrett, M.J, Lawson, D.M, Field, R.A.
Deposit date:2010-06-02
Release date:2010-12-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Chemical Genetics and Cereal Starch Metabolism: Structural Basis of the Non-Covalent and Covalent Inhibition of Barley Beta-Amylase.
Mol.Biosyst., 7, 2011
7BNT
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BU of 7bnt by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with a predicted ancestral HMA domain of Pik-1 from Oryza spp.
Descriptor: 1,2-ETHANEDIOL, AVR-Pik protein, Predicted ancestral HMA domain of Pik-1 from Oryza spp.
Authors:Bialas, A, Langner, T, Harant, A, Contreras, M.P, Stevenson, C.E.M, Lawson, D.M, Sklenar, J, Kellner, R, Moscou, M.J, Terauchi, R, Banfield, M.J, Kamoun, S.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Two NLR immune receptors acquired high-affinity binding to a fungal effector through convergent evolution of their integrated domain.
Elife, 10, 2021
7BM8
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BU of 7bm8 by Molmil
Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed with CTP-gamma-S
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Chromosome-partitioning protein ParB, MAGNESIUM ION
Authors:Jalal, A.S, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Le, T.B.K.
Deposit date:2021-01-19
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:A CTP-dependent gating mechanism enables ParB spreading on DNA.
Elife, 10, 2021
2CJJ
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BU of 2cjj by Molmil
Crystal Structure of the MYB domain of the RAD transcription factor from Antirrhinum majus
Descriptor: RADIALIS
Authors:Stevenson, C.E.M, Burton, N, Costa, M.M, Nath, U, Dixon, R.A, Coen, E.S, Lawson, D.M.
Deposit date:2006-04-04
Release date:2006-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Myb Domain of the Rad Transcription Factor from Antirrhinum Majus.
Proteins: Struct., Funct., Bioinf., 65, 2006
9QVE
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BU of 9qve by Molmil
Satellite Tobacco Necrosis Virus-1
Descriptor: Capsid protein, MAGNESIUM ION
Authors:Saunders, K, Shah, S, Peyret, H, Meshcheriakova, Y, Richardson, J, Eltschkner, S, Lawson, D.M, Lomonossoff, G.
Deposit date:2025-04-11
Release date:2025-05-07
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:The specificity of RNA packaging in isometric RNA plant viruses is principally determined by replication
To Be Published
7NG0
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BU of 7ng0 by Molmil
Crystal structure of N- and C-terminally truncated Geobacillus thermoleovorans nucleoid occlusion protein Noc
Descriptor: Nucleoid occlusion protein, SULFATE ION
Authors:Jalal, A.S.B, Tran, N.T, Wu, L.J, Ramakrishnan, K, Rejzek, M, Stevenson, C.E.M, Lawson, D.M, Errington, J, Le, T.B.K.
Deposit date:2021-02-08
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:CTP regulates membrane-binding activity of the nucleoid occlusion protein Noc.
Mol.Cell, 81, 2021
2Y30
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BU of 2y30 by Molmil
Simocyclinone D8 bound form of TetR-like repressor SimR
Descriptor: CHLORIDE ION, PUTATIVE REPRESSOR SIMREG2, SIMOCYCLINONE D8
Authors:Le, T.B.K, Stevenson, C.E.M, Fiedler, H.-P, Maxwell, A, Lawson, D.M, Buttner, M.J.
Deposit date:2010-12-17
Release date:2011-03-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the Tetr-Like Simocyclinone Efflux Pump Repressor, Simr, and the Mechanism of Ligand-Mediated Derepression.
J.Mol.Biol., 408, 2011
9QVG
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BU of 9qvg by Molmil
Turnip Crinkle Virus: virions (TCV-M)
Descriptor: Capsid protein
Authors:Saunders, K, Shah, S, Peyret, H, Meshcheriakova, Y, Richardson, J, Eltschkner, S, Lawson, D.M, Lomonossoff, G.
Deposit date:2025-04-11
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:The specificity of RNA packaging in isometric RNA plant viruses is principally determined by replication
To Be Published
9QVH
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BU of 9qvh by Molmil
Turnip Crinkle Virus: virus-like particles (TCV-P38)
Descriptor: Capsid protein
Authors:Saunders, K, Shah, S, Peyret, H, Meshcheriakova, Y, Richardson, J, Eltschkner, S, Lawson, D.M, Lomonossoff, G.
Deposit date:2025-04-11
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:The specificity of RNA packaging in isometric RNA plant viruses is principally determined by replication
To Be Published
9QVF
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BU of 9qvf by Molmil
Turnip Crinkle Virus: virus-like particles (TCV-P38+1)
Descriptor: Capsid protein
Authors:Saunders, K, Shah, S, Peyret, H, Meshcheriakova, Y, Richardson, J, Eltschkner, S, Lawson, D.M, Lomonossoff, G.
Deposit date:2025-04-11
Release date:2025-04-23
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:The specificity of RNA packaging in isometric RNA plant viruses is principally determined by replication
To Be Published
5H81
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BU of 5h81 by Molmil
HETEROYOHIMBINE SYNTHASE THAS2 FROM CATHARANTHUS ROSEUS - COMPLEX WITH NADP+
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ZINC ION, heteroyohimbine synthase THAS2
Authors:Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
Deposit date:2015-12-23
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5H83
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BU of 5h83 by Molmil
HETEROYOHIMBINE SYNTHASE HYS FROM CATHARANTHUS ROSEUS - APO FORM
Descriptor: ZINC ION, heteroyohimbine synthase HYS
Authors:Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
Deposit date:2015-12-23
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
5H82
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BU of 5h82 by Molmil
HETEROYOHIMBINE SYNTHASE THAS2 FROM CATHARANTHUS ROSEUS - APO FORM
Descriptor: ZINC ION, heteroyohimbine synthase THAS2
Authors:Stavrinides, A, Tatsis, E.C, Caputi, L, Foureau, E, Stevenson, C.E.M, Lawson, D.M, Courdavault, V, O'Connor, S.E.
Deposit date:2015-12-23
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural investigation of heteroyohimbine alkaloid synthesis reveals active site elements that control stereoselectivity.
Nat Commun, 7, 2016
7PP2
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BU of 7pp2 by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-Pii with the host target Exo70F2 from Rice (Oryza sativa)
Descriptor: AVR-Pii protein, Exocyst subunit Exo70 family protein, ZINC ION
Authors:De la Concepcion, J.C, Bentham, A.R, Lawson, D, Banfield, M.J.
Deposit date:2021-09-13
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:A blast fungus zinc-finger fold effector binds to a hydrophobic pocket in host Exo70 proteins to modulate immune recognition in rice.
Proc.Natl.Acad.Sci.USA, 119, 2022

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