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PDB: 9 results

8A67
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BU of 8a67 by Molmil
Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with matured synthetic nanobody NbSL3.3Q (3rd generation)
Descriptor: CHLORIDE ION, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Lange, S.M, Kulathu, Y.
Deposit date:2022-06-16
Release date:2023-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:VCP/p97-associated proteins are binders and debranching enzymes of K48-K63-branched ubiquitin chains.
Nat.Struct.Mol.Biol., 2024
7NBB
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BU of 7nbb by Molmil
Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Lange, S.M, Kulathu, Y.
Deposit date:2021-01-26
Release date:2022-08-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:VCP/p97-associated proteins are binders and debranching enzymes of K48-K63-branched ubiquitin chains.
Nat.Struct.Mol.Biol., 2024
7NPI
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BU of 7npi by Molmil
Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5)
Descriptor: CHLORIDE ION, Polyubiquitin-C, SODIUM ION, ...
Authors:Lange, S.M, Armstrong, L.A, Kulathu, Y.
Deposit date:2021-02-26
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
7NPO
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BU of 7npo by Molmil
Branched K48-K63-Ub3
Descriptor: GLYCEROL, Polyubiquitin-B
Authors:Lange, S.M, Kwasna, D, Kulathu, Y.
Deposit date:2021-02-27
Release date:2022-08-10
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:VCP/p97-associated proteins are binders and debranching enzymes of K48-K63-branched ubiquitin chains.
Nat.Struct.Mol.Biol., 2024
6RUU
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BU of 6ruu by Molmil
Pseudokinase domain of human IRAK3
Descriptor: GLYCEROL, Interleukin-1 receptor-associated kinase 3, MERCURY (II) ION, ...
Authors:Lange, S.M, Kulathu, Y, Cohen, P.
Deposit date:2019-05-29
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Dimeric Structure of the Pseudokinase IRAK3 Suggests an Allosteric Mechanism for Negative Regulation.
Structure, 29, 2021
6Z7V
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BU of 6z7v by Molmil
Crystal structure of Mindy2 (C266A) in complex with Lys48 linked di-ubiquitin (K48-Ub2)
Descriptor: POTASSIUM ION, Polyubiquitin-C, TETRAETHYLENE GLYCOL, ...
Authors:Abdul Rehman, S.A, Lange, S.M, Kulathu, Y.
Deposit date:2020-06-01
Release date:2021-06-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Mol.Cell, 81, 2021
5HNF
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BU of 5hnf by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*(YPE)P*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*(YPF)P*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-18
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.546 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
5HLT
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BU of 5hlt by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*YPY*TP*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP*YPY*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-15
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.672 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
5HNH
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BU of 5hnh by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*(YPY)P*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*T*(YPY)*(YPY)*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-18
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.876 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016

226707

數據於2024-10-30公開中

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