Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 508 results

5I2A
DownloadVisualize
BU of 5i2a by Molmil
1,2-propanediol Dehydration in Roseburia inulinivorans; Structural Basis for Substrate and Enantiomer Selectivity
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Diol-dehydratase
Authors:LaMattina, J.W, Reitzer, P, Kapoor, S, Galzerani, F, Koch, D.J, Gouvea, I.E, Lanzilotta, W.N.
Deposit date:2016-02-08
Release date:2016-06-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:1,2-Propanediol Dehydration in Roseburia inulinivorans: STRUCTURAL BASIS FOR SUBSTRATE AND ENANTIOMER SELECTIVITY.
J.Biol.Chem., 291, 2016
3HXC
DownloadVisualize
BU of 3hxc by Molmil
Engineered RabGGTase in complex with a peptidomimetic inhibitor (compound 8)
Descriptor: CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ...
Authors:Guo, Z, Alexandrov, K, Waldmann, H, Goody, R.S, Blankenfeldt, W.
Deposit date:2009-06-20
Release date:2009-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Design, synthesis, and characterization of Peptide-based rab geranylgeranyl transferase inhibitors
J.Med.Chem., 52, 2009
6TCB
DownloadVisualize
BU of 6tcb by Molmil
Crystal structure of protein PA2723 from Pseudomonas aeruginosa PAO1
Descriptor: CALCIUM ION, Uncharacterized protein PA2723
Authors:Popp, M.A, Blankenfeldt, W.
Deposit date:2019-11-05
Release date:2020-11-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of protein PA2723 from Pseudomonas aeruginosa PAO1
To Be Published
7OC6
DownloadVisualize
BU of 7oc6 by Molmil
Selenomethionine derivative of alpha-humulene synthase AsR6 from Sarocladium schorii
Descriptor: Alpha-humulene synthase asR6, GLYCEROL, SULFATE ION, ...
Authors:Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
Deposit date:2021-04-26
Release date:2021-07-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OC5
DownloadVisualize
BU of 7oc5 by Molmil
Alpha-humulene synthase AsR6 from Sarocladium schorii
Descriptor: Alpha-humulene synthase AsR6, MAGNESIUM ION, ZINC ION
Authors:Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
Deposit date:2021-04-26
Release date:2021-07-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OC4
DownloadVisualize
BU of 7oc4 by Molmil
Alpha-humulene synthase AsR6 from Sarocladium schorii in complex with thiolodiphosphate and a cyclized reaction product.
Descriptor: (1E,4E,8E)-2,6,6,9-Tetramethyl-1,4-8-cycloundecatriene, (R,R)-2,3-BUTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
Deposit date:2021-04-26
Release date:2021-07-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021
6BTI
DownloadVisualize
BU of 6bti by Molmil
Crystal structure of human cellular retinol binding protein 2 (CRBP2) in complex with N-arachidonoylethanolamine (AEA)
Descriptor: (5Z,8Z,11Z,14Z)-N-(2-hydroxyethyl)icosa-5,8,11,14-tetraenamide, DI(HYDROXYETHYL)ETHER, Retinol-binding protein 2
Authors:Silvaroli, J.A, Blaner, W.S, Lodowski, D.T, Golczak, M.
Deposit date:2017-12-06
Release date:2018-12-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Retinol-binding protein 2 (RBP2) binds monoacylglycerols and modulates gut endocrine signaling and body weight.
Sci Adv, 6, 2020
5HIS
DownloadVisualize
BU of 5his by Molmil
Crystal Structure of PQS Response Protein PqsE in Complex with 3-methylthiophene-2-carboxylic acid
Descriptor: 3-methylthiophene-2-carboxylic acid, FE (III) ION, PqsE
Authors:Witzgall, F, Blankenfeldt, W.
Deposit date:2016-01-12
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Dissecting the Multiple Roles of PqsE in Pseudomonas aeruginosa Virulence by Discovery of Small Tool Compounds.
Acs Chem.Biol., 11, 2016
3DSV
DownloadVisualize
BU of 3dsv by Molmil
Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with mono-prenylated peptide Ser-Cys-Ser-Cys(GG) derivated from Rab7
Descriptor: CALCIUM ION, GERAN-8-YL GERAN, Geranylgeranyl transferase type-2 subunit alpha, ...
Authors:Guo, Z, Yu, S, Goody, R.S, Alexandrov, K, Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3DSU
DownloadVisualize
BU of 3dsu by Molmil
Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with farnesyl pyrophosphate
Descriptor: CALCIUM ION, FARNESYL DIPHOSPHATE, Geranylgeranyl transferase type-2 subunit alpha, ...
Authors:Guo, Z, Yu, S, Goody, R.S, Alexandrov, K, Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
3EX9
DownloadVisualize
BU of 3ex9 by Molmil
Crystal structure of PhzA/B from Burkholderia cepacia R18194 crystallized in C2221
Descriptor: Phenazine biosynthesis protein A/B
Authors:Ahuja, E.G, Blankenfeldt, W.
Deposit date:2008-10-16
Release date:2008-12-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PhzA/B Catalyzes the Formation of the Tricycle in Phenazine Biosynthesis.
J.Am.Chem.Soc., 130, 2008
6BTH
DownloadVisualize
BU of 6bth by Molmil
Crystal structure of human cellular retinol binding protein 2 (CRBP2) in complex with 2-arachidonoylglycerol (2-AG)
Descriptor: 1,3-dihydroxypropan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, DI(HYDROXYETHYL)ETHER, Retinol-binding protein 2
Authors:Silvaroli, J.A, Blaner, W.S, Lodowski, D.T, Golczak, M.
Deposit date:2017-12-06
Release date:2018-12-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Retinol-binding protein 2 (RBP2) binds monoacylglycerols and modulates gut endocrine signaling and body weight.
Sci Adv, 6, 2020
5I2G
DownloadVisualize
BU of 5i2g by Molmil
1,2-propanediol Dehydration in Roseburia inulinivorans; Structural Basis for Substrate and Enantiomer Selectivity
Descriptor: Diol dehydratase, S-1,2-PROPANEDIOL
Authors:LaMattina, J.W, Reitzer, P, Kapoor, S, Galzerani, F, Koch, D.J, Gouvea, I.E, Lanzilotta, W.N.
Deposit date:2016-02-08
Release date:2016-06-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:1,2-Propanediol Dehydration in Roseburia inulinivorans: STRUCTURAL BASIS FOR SUBSTRATE AND ENANTIOMER SELECTIVITY.
J.Biol.Chem., 291, 2016
3CNM
DownloadVisualize
BU of 3cnm by Molmil
Crystal Structure of Phenazine Biosynthesis Protein PhzA/B from Burkholderia cepacia R18194, DHHA complex
Descriptor: (2S,3S)-TRANS-2,3-DIHYDRO-3-HYDROXYANTHRANILIC ACID, ACETATE ION, Phenazine biosynthesis protein A/B
Authors:Ahuja, E.G, Blankenfeldt, W.
Deposit date:2008-03-26
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:PhzA/B catalyzes the formation of the tricycle in phenazine biosynthesis.
J.Am.Chem.Soc., 130, 2008
5HIQ
DownloadVisualize
BU of 5hiq by Molmil
Crystal Structure of PQS Response Protein PqsE in Complex with 2-(1H-pyrrol-1-yl)benzoic acid
Descriptor: 2-pyrrol-1-ylbenzoic acid, FE (III) ION, PqsE
Authors:Witzgall, F, Blankenfeldt, W.
Deposit date:2016-01-12
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting the Multiple Roles of PqsE in Pseudomonas aeruginosa Virulence by Discovery of Small Tool Compounds.
Acs Chem.Biol., 11, 2016
8VQX
DownloadVisualize
BU of 8vqx by Molmil
Structure of SARS-CoV-2 main protease with potent peptide aldehyde inhibitor
Descriptor: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, DI(HYDROXYETHYL)ETHER, ...
Authors:Dougan, D.R, Lane, W.
Deposit date:2024-01-19
Release date:2024-08-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Exploiting high-energy hydration sites for the discovery of potent peptide aldehyde inhibitors of the SARS-CoV-2 main protease with cellular antiviral activity.
Bioorg.Med.Chem., 103, 2024
8AID
DownloadVisualize
BU of 8aid by Molmil
Crystal structure of N-terminally truncated PA4183 from P. aeruginosa PAO1
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, PA4183
Authors:Popp, M.A, Blankenfeldt, W.
Deposit date:2022-07-26
Release date:2022-11-30
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of N-terminally truncated PA4183 from P. aeruginosa PAO1
To Be Published
3JUQ
DownloadVisualize
BU of 3juq by Molmil
Crystal Structure of PhzA/B from Burkholderia cepacia R18194 cocrystallized with 2 mM racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid
Descriptor: 5-bromo-2-[(3R)-piperidin-3-ylamino]benzoic acid, 5-bromo-2-[(3S)-piperidin-3-ylamino]benzoate, Phenazine biosynthesis protein A/B
Authors:Mentel, M, Breinbauer, R, Blankenfeldt, W.
Deposit date:2009-09-15
Release date:2009-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Active Site of an Enzyme Can Host Both Enantiomers of a Racemic Ligand Simultaneously
Angew.Chem.Int.Ed.Engl., 48, 2009
3DSS
DownloadVisualize
BU of 3dss by Molmil
Crystal structure of RabGGTase(DELTA LRR; DELTA IG)
Descriptor: CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ...
Authors:Guo, Z, Yu, S, Goody, R.S, Alexandrov, K, Blankenfeldt, W.
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of RabGGTase-substrate/product complexes provide insights into the evolution of protein prenylation
Embo J., 27, 2008
6TO2
DownloadVisualize
BU of 6to2 by Molmil
Crystal structure of CYP154C5 from Nocardia farcinica in complex with 5alpha-Androstan-3-one
Descriptor: (5~{S},8~{S},9~{S},10~{S},13~{S},14~{S})-10,13-dimethyl-1,2,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-3-one, CHLORIDE ION, Cytochrome P450 monooxygenase, ...
Authors:Rodriguez, A, Kluenemann, T, Blankenfeldt, W, Schallmey, A.
Deposit date:2019-12-11
Release date:2020-11-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:CYP154C5 Regioselectivity in Steroid Hydroxylation Explored by Substrate Modifications and Protein Engineering*.
Chembiochem, 22, 2021
1YUX
DownloadVisualize
BU of 1yux by Molmil
Mixed valant state of nigerythrin
Descriptor: FE (II) ION, FE (III) ION, Nigerythrin
Authors:Iyer, R.B, Silaghi-Dumitrescu, R, Kurtz, D.M, Lanzilotta, W.N.
Deposit date:2005-02-14
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.
J.Biol.Inorg.Chem., 10, 2005
3JUM
DownloadVisualize
BU of 3jum by Molmil
Crystal Structure of PhzA/B from Burkholderia cepacia R18194 in complex with 5-bromo-2-((1S,3R)-3-carboxycyclohexylamino)benzoic acid
Descriptor: 5-bromo-2-{[(1S,3R)-3-carboxycyclohexyl]amino}benzoic acid, Phenazine biosynthesis protein A/B
Authors:Mentel, M, Breinbauer, R, Blankenfeldt, W.
Deposit date:2009-09-15
Release date:2009-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Active Site of an Enzyme Can Host Both Enantiomers of a Racemic Ligand Simultaneously
Angew.Chem.Int.Ed.Engl., 48, 2009
3JUN
DownloadVisualize
BU of 3jun by Molmil
Crystal Structure of PhzA/B from Burkholderia cepacia R18194 in simultaneous complex with racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid
Descriptor: 5-bromo-2-[(3R)-piperidin-3-ylamino]benzoic acid, 5-bromo-2-[(3S)-piperidin-3-ylamino]benzoate, Phenazine biosynthesis protein A/B
Authors:Mentel, M, Breinbauer, R, Blankenfeldt, W.
Deposit date:2009-09-15
Release date:2009-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Active Site of an Enzyme Can Host Both Enantiomers of a Racemic Ligand Simultaneously
Angew.Chem.Int.Ed.Engl., 48, 2009
1YV1
DownloadVisualize
BU of 1yv1 by Molmil
Fully reduced state of nigerythrin (all ferrous)
Descriptor: FE (II) ION, Nigerythrin
Authors:Iyer, R.B, Silaghi-Dumitrescu, R, Kurtz, D.M, Lanzilotta, W.N.
Deposit date:2005-02-14
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.
J.Biol.Inorg.Chem., 10, 2005
1YUZ
DownloadVisualize
BU of 1yuz by Molmil
Partially Reduced State of Nigerythrin
Descriptor: FE (II) ION, FE (III) ION, Nigerythrin
Authors:Iyer, R.B, Silaghi-Dumitrescu, R, Kurtz, D.M, Lanzilotta, W.N.
Deposit date:2005-02-14
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.
J.Biol.Inorg.Chem., 10, 2005

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon