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PDB: 163 results

6BI5
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BU of 6bi5 by Molmil
NMR solution structure of Defensin1 from Centruroides limpidus limpidus
Descriptor: Defensin-1
Authors:Escobedo-Gonzalez, F.C, del Rio-Portilla, F, Rodriguez-Solano, L.A.
Deposit date:2017-10-31
Release date:2018-09-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:From good defence into mortal risk: NMR studyand conversion of a defensin into a neurotoxin
To Be Published
6N1D
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BU of 6n1d by Molmil
X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Noller, H.F, Donohue, J.P, Lancaster, L, Zhou, J.
Deposit date:2018-11-08
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Spontaneous ribosomal translocation of mRNA and tRNAs into a chimeric hybrid state.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
8PM6
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BU of 8pm6 by Molmil
Human bile salt export pump (BSEP) in complex with inhibitor GBM in nanodiscs
Descriptor: 5-chloro-N-(2-{4-[(cyclohexylcarbamoyl)sulfamoyl]phenyl}ethyl)-2-methoxybenzamide, Bile salt export pump, CHOLESTEROL
Authors:Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
Deposit date:2023-06-28
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
8PMJ
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BU of 8pmj by Molmil
Vanadate-trapped BSEP in nanodiscs
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, ...
Authors:Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
Deposit date:2023-06-28
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
8PMD
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BU of 8pmd by Molmil
Nucleotide-bound BSEP in nanodiscs
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, MAGNESIUM ION
Authors:Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
Deposit date:2023-06-28
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
6OAX
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BU of 6oax by Molmil
Structure of the hyperactive ClpB mutant K476C, bound to casein, pre-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Alpha-S1-casein, Hyperactive disaggregase ClpB, ...
Authors:Rizo, A.R, Lin, J.-B, Gates, S.N, Tse, E, Bart, S.M, Castellano, L.M, Dimaio, F, Shorter, J, Southworth, D.R.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for substrate gripping and translocation by the ClpB AAA+ disaggregase.
Nat Commun, 10, 2019
6OAY
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BU of 6oay by Molmil
Structure of the hyperactive ClpB mutant K476C, bound to casein, post-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Alpha-S1-casein, Hyperactive disaggregase ClpB, ...
Authors:Rizo, A.R, Lin, J.-B, Gates, S.N, Tse, E, Bart, S.M, Castellano, L.M, Dimaio, F, Shorter, J, Southworth, D.R.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for substrate gripping and translocation by the ClpB AAA+ disaggregase.
Nat Commun, 10, 2019
5A0B
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BU of 5a0b by Molmil
Crystal Structure of human neutrophil elastase in complex with a dihydropyrimidone inhibitor
Descriptor: (4R)-4-(4-cyanophenyl)-6-methyl-2-oxidanylidene-3-[2-oxidanylidene-2-(4-propan-2-ylpiperazin-1-yl)ethyl]-1-[3-(trifluoromethyl)phenyl]-4H-pyrimidine-5-carbonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:vonNussbaum, F, Li, V.M.-J, Allerheiligen, S, Anlauf, S, Baerfacker, L, Bechem, M, Delbeck, M, Fitzgerald, M.F, Gerisch, M, Gielen-Haertwig, H, Haning, H, Karthaus, D, Lang, D, Lustig, K, Meibom, D, Mittendorf, J, Rosentreter, U, Schaefer, M, Schaefer, S, Schamberger, J, Telan, L.A, Tersteegen, A.
Deposit date:2015-04-17
Release date:2015-08-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Freezing the Bioactive Conformation to Boost Potency: The Identification of BAY 85-8501, a Selective and Potent Inhibitor of Human Neutrophil Elastase for Pulmonary Diseases.
ChemMedChem, 10, 2015
2BCE
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BU of 2bce by Molmil
CHOLESTEROL ESTERASE FROM BOS TAURUS
Descriptor: CHOLESTEROL ESTERASE
Authors:Chen, J.C.-H, Miercke, L.J.W, Krucinski, J, Starr, J.R, Saenz, G, Wang, X, Spilburg, C.A, Lange, L.G, Ellsworth, J.L, Stroud, R.M.
Deposit date:1998-01-28
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of bovine pancreatic cholesterol esterase at 1.6 A: novel structural features involved in lipase activation.
Biochemistry, 37, 1998
1XSM
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BU of 1xsm by Molmil
PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE FROM MOUSE
Descriptor: FE (III) ION, RIBONUCLEOTIDE REDUCTASE R2
Authors:Kauppi, B, Nielsen, B.N, Ramaswamy, S, Kjoller-Larsen, I, Thelander, M, Thelander, L, Eklund, H.
Deposit date:1996-07-03
Release date:1997-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The three-dimensional structure of mammalian ribonucleotide reductase protein R2 reveals a more-accessible iron-radical site than Escherichia coli R2.
J.Mol.Biol., 262, 1996
7Z7D
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BU of 7z7d by Molmil
Tubulin-Todalam-Vinblastine-complex
Descriptor: (2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALEUKOBLASTINE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Muehlethaler, T, Milanos, L, Ortega, J.A, Blum, T.B, Gioia, D, Roy, B, Prota, A.E, Cavalli, A, Steinmetz, M.O.
Deposit date:2022-03-15
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational Design of a Novel Tubulin Inhibitor with a Unique Mechanism of Action.
Angew.Chem.Int.Ed.Engl., 61, 2022
7ZOK
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BU of 7zok by Molmil
A novel molecular switch controls assembly of bacterial focal adhesions in response to changes in surface structure.
Descriptor: Adventurous gliding motility protein GltJ, ZINC ION
Authors:Attia, B, My, L, Castaing, J.P, Le Guenno, H, Espinosa, L, Schmidt, V, Nouailler, M, Bornet, O, Mignot, T, Elantak, L.
Deposit date:2022-04-25
Release date:2023-02-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A novel molecular switch controls assembly of bacterial focal adhesions in response to changes in surface structure.
To Be Published
2K8X
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BU of 2k8x by Molmil
GlyTM1b(1-19)zip: A Chimeric Peptide Model of the N-Terminus of a Rat Short Alpha-Tropomyosin with the N-Terminus Encoded by Exon 1b in Complex with TM9d(252-284), a Peptide Model Containing the C Terminus of Alpha-Tropomyosin Encoded by Exon 9d
Descriptor: TM1b(1-19)Zip
Authors:Greenfield, N.J, Kotylanskaya, L, Hitchcock-DeGregori, S.E.
Deposit date:2008-09-25
Release date:2009-04-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the N terminus of a nonmuscle alpha-tropomyosin in complex with the C terminus: implications for actin binding.
Biochemistry, 48, 2009
8P64
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BU of 8p64 by Molmil
Co-crystal structure of PD-L1 with low molecular weight inhibitor
Descriptor: Programmed cell death 1 ligand 1, ~{N}-[[1-[(~{E})-2-(2-methyl-3-phenyl-phenyl)ethenyl]-1,2,3,4-tetrazol-5-yl]methyl]ethanamine
Authors:Plewka, J, Magiera-Mularz, K, van der Straat, R, Draijer, R, Surmiak, E, Butera, R, Land, L, Musielak, B, Domling, A.
Deposit date:2023-05-25
Release date:2024-03-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.312 Å)
Cite:1,5-Disubstituted tetrazoles as PD-1/PD-L1 antagonists.
Rsc Med Chem, 15, 2024
6DIZ
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BU of 6diz by Molmil
EV-A71 strain 11316 complexed with tryptophan dendrimer MADAL_0385
Descriptor: SPHINGOSINE, VP1, VP2, ...
Authors:Sun, L, Lee, H, Thibaut, H.J, Rivero-Buceta, E, Martinez-Gualda, B, Delang, L, Leyssen, P, Gago, F, San-Felix, A, Hafenstein, S, Mirabelli, C, Neyts, J.
Deposit date:2018-05-24
Release date:2019-04-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Viral engagement with host (co-)receptors blocked by a novel class of tryptophan dendrimers that targets the 5-fold-axis of the enterovirus-A71 capsid.
Plos Pathog., 15, 2019
1Q11
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BU of 1q11 by Molmil
Crystal structure of an active fragment of human tyrosyl-tRNA synthetase with tyrosinol
Descriptor: 4-[(2S)-2-amino-3-hydroxypropyl]phenol, GLYCEROL, PHOSPHATE ION, ...
Authors:Yang, X.-L, Schimmel, P, Ribas de Pouplana, L.
Deposit date:2003-07-18
Release date:2004-01-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures that suggest late development of genetic code components for differentiating aromatic side chains
Proc.Natl.Acad.Sci.USA, 100, 2003
2EX3
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BU of 2ex3 by Molmil
Bacteriophage phi29 DNA polymerase bound to terminal protein
Descriptor: DNA polymerase, DNA terminal protein, LEAD (II) ION
Authors:Kamtekar, S, Berman, A.J, Wang, J, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
Deposit date:2005-11-07
Release date:2006-03-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The phi29 DNA polymerase:protein-primer structure suggests a model for the initiation to elongation transition
Embo J., 25, 2006
6OG1
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BU of 6og1 by Molmil
Focus classification structure of the hyperactive ClpB mutant K476C, bound to casein, pre-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Hyperactive disaggregase ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Rizo, A.R, Lin, J.-B, Gates, S.N, Tse, E, Bart, S.M, Castellano, L.M, Dimaio, F, Shorter, J, Southworth, D.R.
Deposit date:2019-04-01
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for substrate gripping and translocation by the ClpB AAA+ disaggregase.
Nat Commun, 10, 2019
5J0F
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BU of 5j0f by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P4/5
Descriptor: GLYCEROL, Superoxide dismutase [Cu-Zn],OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-28
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
5J0G
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BU of 5j0g by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P7/8
Descriptor: OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-28
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
2C6S
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BU of 2c6s by Molmil
human adenovirus penton base 2 12 chimera
Descriptor: ADENOVIRUS 2,12 PENTON BASE CHIMERA
Authors:Zubieta, C, Blanchoin, L, Cusack, S.
Deposit date:2005-11-11
Release date:2006-09-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural and Biochemical Characterization of a Human Adenovirus 2/12 Penton Base Chimera.
FEBS J., 273, 2006
1RZT
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BU of 1rzt by Molmil
Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA molecule
Descriptor: 1,2-ETHANEDIOL, 5'-D(*CP*GP*GP*CP*AP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*G)-3', ...
Authors:Pedersen, L.C, Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Blanco, L, Kunkel, T.A.
Deposit date:2003-12-29
Release date:2004-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural solution for the DNA polymerase lambda-dependent repair of DNA gaps with minimal homology.
Mol.Cell, 13, 2004
1XHX
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BU of 1xhx by Molmil
Phi29 DNA Polymerase, orthorhombic crystal form
Descriptor: DNA polymerase, MAGNESIUM ION, SULFATE ION
Authors:Kamtekar, S, Berman, A.J, Wang, J, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
Deposit date:2004-09-21
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Insights into Strand Displacement and Processivity from the Crystal Structure of the Protein-Primed DNA Polymerase of Bacteriophage phi29
Mol.Cell, 16, 2004
5J07
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BU of 5j07 by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P1/2
Descriptor: Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-27
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016
5J0C
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BU of 5j0c by Molmil
Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P2/3
Descriptor: Superoxide dismutase [Cu-Zn],Superoxide dismutase [Cu-Zn],OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn]
Authors:Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M.
Deposit date:2016-03-28
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Tricking a Protein To Swap Strands.
J. Am. Chem. Soc., 138, 2016

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數據於2024-07-17公開中

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