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PDB: 1191 件
7DX8
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BU of 7dx8 by Molmil
Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (2 up RBD and 2 PD bound)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Ye, F.F, Guo, Y.Y, Xia, L, Zhong, X.Y, Chi, X.M, Zhou, Q.
登録日2021-01-18
公開日2021-03-31
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for the different states of the spike protein of SARS-CoV-2 in complex with ACE2.
Cell Res., 31, 2021
7DX5
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BU of 7dx5 by Molmil
S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (1 up RBD and 1 PD bound)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Ye, F.F, Guo, Y.Y, Xia, L, Zhong, X.Y, Chi, X.M, Zhou, Q.
登録日2021-01-18
公開日2021-03-31
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for the different states of the spike protein of SARS-CoV-2 in complex with ACE2.
Cell Res., 31, 2021
7DX9
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BU of 7dx9 by Molmil
Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 3 (3 up RBD and 2 PD bound)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Ye, F.F, Guo, Y.Y, Xia, L, Zhong, X.Y, Chi, X.M, Zhou, Q.
登録日2021-01-18
公開日2021-03-31
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for the different states of the spike protein of SARS-CoV-2 in complex with ACE2.
Cell Res., 31, 2021
7DX7
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BU of 7dx7 by Molmil
Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 1 (1 up RBD and 1 PD bound)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Ye, F.F, Guo, Y.Y, Xia, L, Zhong, X.Y, Chi, X.M, Zhou, Q.
登録日2021-01-18
公開日2021-03-31
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for the different states of the spike protein of SARS-CoV-2 in complex with ACE2.
Cell Res., 31, 2021
3HSD
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BU of 3hsd by Molmil
Crystal structure of E. coli HPPK(Y53A)
分子名称: CHLORIDE ION, GLYCEROL, HPPK, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-06-10
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK.
To be Published
5Z12
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BU of 5z12 by Molmil
A structure of FXR/RXR
分子名称: (9cis)-retinoic acid, 1-methylethyl 3-[(3,4-difluorophenyl)carbonyl]-1,1-dimethyl-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate, Bile acid receptor, ...
著者Lu, Y, Li, Y.
登録日2017-12-23
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into the heterodimeric complex of the nuclear receptors FXR and RXR
J. Biol. Chem., 293, 2018
3GD9
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BU of 3gd9 by Molmil
Crystal structure of laminaripentaose-producing beta-1,3-glucanase in complex with laminaritetraose
分子名称: Laminaripentaose-producing beta-1,3-guluase (LPHase), beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose
著者Wu, H.M, Hsu, M.T, Liu, S.W, Lai, C.C, Li, Y.K, Wang, W.C.
登録日2009-02-23
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure, mechanistic action, and essential residues of a GH-64 enzyme, laminaripentaose-producing beta-1,3-glucanase.
J.Biol.Chem., 284, 2009
3ILL
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BU of 3ill by Molmil
Crystal structure of E. coli HPPK(D97A)
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, CHLORIDE ION
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-08-07
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural and functional roles of residues D95 and D97 in E. coli HPPK
To be Published
2G1J
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BU of 2g1j by Molmil
Crystal structure of Mycobacterium tuberculosis Shikimate Kinase at 2.0 angstrom resolution
分子名称: SULFATE ION, Shikimate kinase
著者Gan, J, Gu, Y, Li, Y, Yan, H, Ji, X.
登録日2006-02-14
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Mycobacterium tuberculosis Shikimate Kinase in Complex with Shikimic Acid and an ATP Analogue.
Biochemistry, 45, 2006
3ILI
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BU of 3ili by Molmil
Crystal structure of E. coli HPPK(D95A)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-08-07
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural and functional roles of residues D95 and D97 in E. coli HPPK
To be Published
3HCX
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BU of 3hcx by Molmil
Crystal structure of E. coli HPPK(N10A)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, CHLORIDE ION
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-05-06
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Role of loop coupling in enzymatic catalysis and conformational dynamics
To be Published
2KEO
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BU of 2keo by Molmil
Solution NMR structure of human protein HS00059, cytochrome-b5-like domain of the HERC2 E3 ligase. Northeast structural genomics consortium (NESG) target ht98a
分子名称: Probable E3 ubiquitin-protein ligase HERC2
著者Lemak, A, Gutmanas, A, Fares, C, Quyang, H, Li, Y, Montelione, G, Arrowsmith, C, Dhe-Paganon, S, Northeast Structural Genomics Consortium (NESG)
登録日2009-01-30
公開日2009-02-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of human protein HS00059
To be Published
3HSZ
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BU of 3hsz by Molmil
Crystal structure of E. coli HPPK(F123A)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CHLORIDE ION, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-06-11
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
6M18
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BU of 6m18 by Molmil
ACE2-B0AT1 complex
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Xia, L, Zhou, Q.
登録日2020-02-25
公開日2020-03-11
最終更新日2020-11-04
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2.
Science, 367, 2020
3ILO
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BU of 3ilo by Molmil
Crystal structure of E. coli HPPK(D97A) in complex with MgAMPCPP and 6-hydroxymethyl-7,8-dihydropterin
分子名称: 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-08-07
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural and functional roles of residues D95 and D97 in E. coli HPPK
To be Published
5H43
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BU of 5h43 by Molmil
Structural and mechanistical studies of the nuclear import by Importin-alpha
分子名称: Histone acetyltransferase KAT8, Importin subunit alpha-1
著者Wang, R, Li, Y.
登録日2016-10-28
公開日2017-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the nuclear import of the histone acetyltransferase males-absent-on-the-first by importin alpha 1
Traffic, 19, 2018
5FRS
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BU of 5frs by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
分子名称: SISTER CHROMATID COHESION PROTEIN 1, SISTER CHROMATID COHESION PROTEIN PDS5
著者Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
登録日2015-12-22
公開日2016-03-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.073 Å)
主引用文献Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
5FRP
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BU of 5frp by Molmil
Structure of the Pds5-Scc1 complex and implications for cohesin function
分子名称: MCD1-LIKE PROTEIN, SISTER CHROMATID COHESION PROTEIN PDS5
著者Muir, K.W, Kschonsak, M, Li, Y, Metz, J, Haering, C.H, Panne, D.
登録日2015-12-21
公開日2016-03-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.895 Å)
主引用文献Structure of the Pds5-Scc1 Complex and Implications for Cohesin Function
Cell Rep., 14, 2016
3GUC
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BU of 3guc by Molmil
Human Ubiquitin-activating Enzyme 5 in Complex with AMPPNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ubiquitin-like modifier-activating enzyme 5, ZINC ION
著者Walker, J.R, Bacik, J.P, Li, Y, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2009-03-29
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Human Ubiquitin-activating Enzyme 5 in Complex with AMPPNP
To be Published
3HSG
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BU of 3hsg by Molmil
Crystal structure of E. coli HPPK(Y53A) in complex with MgAMPCPP
分子名称: ACETATE ION, CHLORIDE ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-06-10
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
3HSJ
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BU of 3hsj by Molmil
Crystal structure of E. coli HPPK(N55A)
分子名称: ACETATE ION, GLYCEROL, HPPK
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-06-10
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
2MQ6
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BU of 2mq6 by Molmil
Solution structure of Y125F mutant of eRF1 N-domain
分子名称: Eukaryotic peptide chain release factor subunit 1
著者Pillay, S, Li, Y, Wong, L, Pervushin, K.
登録日2014-06-12
公開日2015-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
6M1D
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BU of 6m1d by Molmil
ACE2-B0AT1 complex, open conformation
分子名称: Angiotensin-converting enzyme 2, Sodium-dependent neutral amino acid transporter B(0)AT1
著者Yan, R.H, Zhang, Y.Y, Li, Y.N, Xia, L, Zhou, Q.
登録日2020-02-25
公開日2020-03-11
最終更新日2020-04-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural basis for the recognition of SARS-CoV-2 by full-length human ACE2.
Science, 367, 2020
6C9J
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BU of 6c9j by Molmil
AMP-activated protein kinase bound to pharmacological activator R734
分子名称: 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ...
著者Yan, Y, Zhou, X.E, Novick, S, Shaw, S.J, Li, Y, Brunzelle, J.S, Hitoshi, Y, Griffin, P.R, Xu, H.E, Melcher, K.
登録日2018-01-26
公開日2018-11-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states.
J. Biol. Chem., 294, 2019
7Y75
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BU of 7y75 by Molmil
SIT1-ACE2-BA.2 RBD
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Shen, Y.P, Li, Y.N, Zhang, Y.Y, Yan, R.H.
登録日2022-06-21
公開日2022-11-30
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of ACE2-SIT1 recognized by Omicron variants of SARS-CoV-2.
Cell Discov, 8, 2022

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