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PDB: 18 results

1QH9
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ENZYME-PRODUCT COMPLEX OF L-2-HALOACID DEHALOGENASE
Descriptor: 2-HALOACID DEHALOGENASE, LACTIC ACID
Authors:Li, Y.-F, Hata, Y, Fujii, T, Kurihara, T, Esaki, N.
Deposit date:1999-05-12
Release date:2000-05-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Structure of L-2-Haloacid Dehalogenase Complexed with a Reaction Product Reveals the Mechanism of Intermediate Hydrolysis in Dehalogenase
To be Published
4N2X
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Crystal Structure of DL-2-haloacid dehalogenase
Descriptor: DL-2-haloacid dehalogenase, GLYCEROL
Authors:Siwek, A, Omi, R, Hirotsu, K, Jitsumori, K, Esaki, N, Kurihara, T, Paneth, P.
Deposit date:2013-10-06
Release date:2013-11-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding modes of DL-2-haloacid dehalogenase revealed by crystallography, modeling and isotope effects studies.
Arch.Biochem.Biophys., 540, 2013
8YWO
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BU of 8ywo by Molmil
Crystal structure of L-azetidine-2-carboxylate hydrolase soaked in (S)-azetidine-2-carboxylic acid
Descriptor: (2S)-azetidine-2-carboxylic acid, (S)-2-haloacid dehalogenase
Authors:Toyoda, M, Mizutani, K, Mikami, B, Wackett, L.P, Esaki, N, Kurihara, T.
Deposit date:2024-03-31
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Research for the crystal structure of L-azetidine-2-carboxylate hydrolase
To Be Published
8YVW
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Crystal structure of D12N mutant of L-azetidine-2-carboxylate hydrolase
Descriptor: (S)-2-haloacid dehalogenase, FORMIC ACID, IMIDAZOLE, ...
Authors:Toyoda, M, Mizutani, K, Mikami, B, Wackett, L.P, Esaki, N, Kurihara, T.
Deposit date:2024-03-29
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Research for the crystal structure of L-azetidine-2-carboxylate hydrolase
To Be Published
1C0N
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CSDB PROTEIN, NIFS HOMOLOGUE
Descriptor: ACETIC ACID, PROTEIN (CSDB PROTEIN), PYRIDOXAL-5'-PHOSPHATE
Authors:Fujii, T, Maeda, M, Mihara, H, Kurihara, T, Esaki, N, Hata, Y.
Deposit date:1999-07-17
Release date:2000-07-17
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a NifS homologue: X-ray structure analysis of CsdB, an Escherichia coli counterpart of mammalian selenocysteine lyase
Biochemistry, 39, 2000
1I29
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CRYSTAL STRUCTURE OF CSDB COMPLEXED WITH L-PROPARGYLGLYCINE
Descriptor: (2S)-2-aminobut-3-ynoic acid, CSDB, PYRIDOXAL-5'-PHOSPHATE
Authors:Mihara, H, Fujii, T, Kurihara, T, Hata, Y, Esaki, N.
Deposit date:2001-02-07
Release date:2003-07-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of external aldimine of Escherichia coli CsdB, an IscS/NifS homolog: implications for its specificity toward selenocysteine.
J.BIOCHEM.(TOKYO), 131, 2002
1JUD
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L-2-HALOACID DEHALOGENASE
Descriptor: L-2-HALOACID DEHALOGENASE
Authors:Hisano, T, Hata, Y, Fujii, T, Liu, J.-Q, Kurihara, T, Esaki, N, Soda, K.
Deposit date:1996-06-03
Release date:1996-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of L-2-haloacid dehalogenase from Pseudomonas sp. YL. An alpha/beta hydrolase structure that is different from the alpha/beta hydrolase fold.
J.Biol.Chem., 271, 1996
1ZRN
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INTERMEDIATE STRUCTURE OF L-2-HALOACID DEHALOGENASE WITH MONOCHLOROACETATE
Descriptor: ACETIC ACID, L-2-HALOACID DEHALOGENASE
Authors:Li, Y.-F, Hata, Y, Fujii, T, Hisano, T, Nishihara, M, Kurihara, T, Esaki, N.
Deposit date:1998-03-03
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of reaction intermediates of L-2-haloacid dehalogenase and implications for the reaction mechanism.
J.Biol.Chem., 273, 1998
1ZRM
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CRYSTAL STRUCTURE OF THE REACTION INTERMEDIATE OF L-2-HALOACID DEHALOGENASE WITH 2-CHLORO-N-BUTYRATE
Descriptor: L-2-HALOACID DEHALOGENASE, butanoic acid
Authors:Li, Y.-F, Hata, Y, Fujii, T, Hisano, T, Nishihara, M, Kurihara, T, Esaki, N.
Deposit date:1998-03-03
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of reaction intermediates of L-2-haloacid dehalogenase and implications for the reaction mechanism.
J.Biol.Chem., 273, 1998
1WOJ
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BU of 1woj by Molmil
Crystal structure of human phosphodiesterase
Descriptor: 2',3'-cyclic-nucleotide 3'-phosphodiesterase, PHOSPHATE ION
Authors:Sakamoto, Y, Tanaka, N, Ichimiya, T, Kurihara, T, Nakamura, K.T.
Deposit date:2004-08-19
Release date:2005-03-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the catalytic fragment of human brain 2',3'-cyclic-nucleotide 3'-phosphodiesterase
J.Mol.Biol., 346, 2005
2DPC
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BU of 2dpc by Molmil
Crystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine
Descriptor: (6-AMINOHEXYL)CARBAMIC ACID, COBALT (II) ION, DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*(OMU)P*DCP*DGP*DCP*DG)-3'), ...
Authors:Juan, E.C.M, Kondo, J, Kurihara, T, Ito, T, Ueno, Y, Matsuda, A, Takenaka, A.
Deposit date:2006-05-08
Release date:2007-04-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules
Nucleic Acids Res., 35, 2007
2DP7
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Crystal Structure of D(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridine
Descriptor: (6-AMINOHEXYL)CARBAMIC ACID, DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DUP*DCP*DGP*DCP*DG)-3'), MAGNESIUM ION, ...
Authors:Juan, E.C.M, Kondo, J, Kurihara, T, Ito, T, Ueno, Y, Matsuda, A, Takenaka, A.
Deposit date:2006-05-08
Release date:2007-04-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules
Nucleic Acids Res., 35, 2007
2DPB
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Crystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridine
Descriptor: (6-AMINOHEXYL)CARBAMIC ACID, DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DUP*DCP*DGP*DCP*DG)-3'), POTASSIUM ION
Authors:Juan, E.C.M, Kondo, J, Kurihara, T, Ito, T, Ueno, Y, Matsuda, A, Takenaka, A.
Deposit date:2006-05-08
Release date:2007-04-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules
Nucleic Acids Res., 35, 2007
1WTJ
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae pvar.tomato
Descriptor: ureidoglycolate dehydrogenase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2004-11-24
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
3SMV
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BU of 3smv by Molmil
X-ray Crystal Structure of L-Azetidine-2-Carboxylate Hydrolase
Descriptor: (S)-2-haloacid dehalogenase, GLYCEROL, IMIDAZOLE
Authors:Toyoda, M, Mikami, B, Jitsumori, K, Wackett, L.P, Esaki, N, Kurihara, T.
Deposit date:2011-06-28
Release date:2012-07-18
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Crystal structure of L-Azetidine-2-carboxylate hydrolase from Pseudomonas sp. strain A2C
To be Published
3WJ8
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Crystal Structure of DL-2-haloacid dehalogenase mutant with 2-bromo-2-methylpropionate
Descriptor: 2-bromo-2-methylpropanoic acid, DL-2-haloacid dehalogenase, GLYCEROL
Authors:Siwek, A, Omi, R, Hirotsu, K, Jitsumori, K, Esaki, N, Kurihara, T, Paneth, P.
Deposit date:2013-10-07
Release date:2013-11-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding modes of DL-2-haloacid dehalogenase revealed by crystallography, modeling and isotope effects studies.
Arch.Biochem.Biophys., 540, 2013
2CWF
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, delta1-piperideine-2-carboxylate reductase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2005-06-20
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2CWH
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRROLE-2-CARBOXYLATE, delta1-piperideine-2-carboxylate reductase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2005-06-20
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005

226707

数据于2024-10-30公开中

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