2DPB

Crystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridine

Summary for 2DPB

• Entry DOI: 10.2210/pdb2dpb/pdb
• Related: 2DP7 2DPC
• Descriptor: DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DUP*DCP*DGP*DCP*DG)-3'), (6-AMINOHEXYL)CARBAMIC ACID, POTASSIUM ION, ... (4 entities in total)
• Functional Keywords: modified nucleotide, 5-(n-aminohexyl)carbamoyl-2'-deoxyuridine, b-dna, dna
• Total number of polymer chains: 2
• Total formula weight: 7658.26

Authors

Juan, E.C.M.,Kondo, J.,Kurihara, T.,Ito, T.,Ueno, Y.,Matsuda, A.,Takenaka, A. (deposition date: 2006-05-08, release date: 2007-04-17, Last modification date: 2023-10-25)

• Primary citation: Juan, E.C.M.,Kondo, J.,Kurihara, T.,Ito, T.,Ueno, Y.,Matsuda, A.,Takenaka, A.; Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules; Nucleic Acids Res., 35:1969-1977, 2007; PubMed: 17341465; DOI: 10.1093/nar/gkl821

Experimental method

X-RAY DIFFRACTION (1.5 Å)