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PDB: 468 件

1J2W
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Tetrameric Structure of aldolase from Thermus thermophilus HB8
分子名称: Aldolase protein
著者Lokanath, N.K, Shiromizu, I, Miyano, M, Yokoyama, S, Kuramitsu, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-01-14
公開日2003-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1IQU
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Crystal structure of photolyase-thymine complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, THYMINE, ...
著者Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-08-03
公開日2002-05-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IUG
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The crystal structure of aspartate aminotransferase which belongs to subgroup IV from Thermus thermophilus
分子名称: PHOSPHATE ION, putative aspartate aminotransferase
著者Katsura, Y, Shirouzu, M, Yamaguchi, H, Ishitani, R, Nureki, O, Kuramitsu, S, Hayashi, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-04
公開日2003-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a putative aspartate aminotransferase belonging to subgroup IV.
Proteins, 55, 2004
1J1Y
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Crystal Structure of PaaI from Thermus thermophilus HB8
分子名称: CHLORIDE ION, MAGNESIUM ION, PaaI protein
著者Kunishima, N, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-12-24
公開日2004-02-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
2A4K
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3-Oxoacyl-[acyl carrier protein] reductase from Thermus thermophilus TT0137
分子名称: 3-oxoacyl-[acyl carrier protein] reductase, UNKNOWN ATOM OR ION
著者Zhou, W, Ebihara, A, Tempel, W, Yokoyama, S, Chen, L, Kuramitsu, S, Nguyen, J, Chang, S.-H, Liu, Z.-J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-29
公開日2006-01-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献3-Oxoacyl-[acyl carrier protein] reductase from Thermus thermophilus TT0137
To be Published
1WDT
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Crystal structure of ttk003000868 from Thermus thermophilus HB8
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, elongation factor G homolog
著者Wang, H, Takemoto-Hori, C, Murayama, K, Sekine, S, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-17
公開日2005-05-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of ttk003000868 from Thermus thermophilus HB8
To be published
1WOT
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Structure of putative minimal nucleotidyltransferase
分子名称: PUTATIVE MINIMAL NUCLEOTIDYLTRANSFERASE
著者Suzuki, S, Hatanaka, H, Hondoh, T, Okumura, A, Kuroda, Y, Kuramitsu, S, Shibata, T, Inoue, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-08-25
公開日2004-09-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of Putative Minimal Nucleotidyltransferase
To be Published
1WUB
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Crystal structure of the polyisoprenoid-binding protein, TT1927b, from Thermus thermophilus HB8
分子名称: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, conserved hypothetical protein TT1927b
著者Handa, N, Idaka, M, Terada, T, Hamana, H, Ishizuka, Y, Park, S.-Y, Tame, J.R.H, Doi-Katayama, Y, Hirota, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-03
公開日2004-12-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8
Protein Sci., 14, 2005
3VPR
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Crystal Structure of a TetR Family Transcriptional Regulator PfmR from Thermus thermophilus HB8
分子名称: Transcriptional regulator, TetR family
著者Agari, Y, Sakamoto, K, Kuramitsu, S, Shinkai, A.
登録日2012-03-12
公開日2012-07-11
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Transcriptional repression mediated by a TetR family protein, PfmR, from Thermus thermophilus HB8
J.Bacteriol., 2012
1D2M
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UVRB PROTEIN OF THERMUS THERMOPHILUS HB8; A NUCLEOTIDE EXCISION REPAIR ENZYME
分子名称: EXCINUCLEASE ABC SUBUNIT B, SULFATE ION, octyl beta-D-glucopyranoside
著者Nakagawa, N, Sugahara, M, Masui, R, Kato, R, Fukuyama, K, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-09-25
公開日2000-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair.
J.Biochem.(Tokyo), 126, 1999
3W8N
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Open form structure of CMP kinase in complex with CMP from Thermus thermophilus HB8
分子名称: CYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase
著者Nakagawa, N, Mega, R, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2013-03-19
公開日2013-09-25
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of CMP kinase: insights into initial substrate recognition and reaction mechanisms
To be Published
1WUQ
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Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP
分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-08
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1WUR
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Structure of GTP cyclohydrolase I Complexed with 8-oxo-dGTP
分子名称: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-08
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1WJG
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Crystal structure of a probable ATP binding protein from thermus themophilus HB8
分子名称: probable ATP binding protein
著者Iino, H, Yao, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a probable atp binding protein from thermus themophilus HB8
To be Published
1WDI
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Crystal Structure Of TT0907 From Thermus Thermophilus HB8
分子名称: CITRIC ACID, hypothetical protein TT0907
著者Idaka, M, Yagi, H, Murayama, K, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-17
公開日2004-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure Of TT0907 From Thermus Thermophilus HB8
To be published
1WCX
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Crystal Structure of Mutant Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (L75M/I193M/L248M, SeMet derivative, Form-1 crystal)
分子名称: GLYCEROL, Uroporphyrinogen III Synthase
著者Mizohata, E, Matsuura, T, Murayama, K, Sakai, H, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-06
公開日2005-05-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Uroporphyrinogen III Synthase from Thermus thermophilus HB8
To be Published
1WCW
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Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-1 crystal)
分子名称: GLYCEROL, Uroporphyrinogen III synthase
著者Mizohata, E, Matsuura, T, Sakai, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-06
公開日2005-05-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Uroporphyrinogen III Synthase from Thermus thermophilus HB8
To be Published
1WKJ
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Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8
分子名称: nucleoside diphosphate kinase
著者Takeishi, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-31
公開日2005-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8
To be Published
1WWP
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Crystal structure of ttk003001694 from Thermus Thermophilus HB8
分子名称: hypothetical protein TTHA0636
著者Wang, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-12
公開日2005-07-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of ttk003001694 from Thermus Thermophilus HB8
TO BE PUBLISHED
1IZ9
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Crystal Structure of Malate Dehydrogenase from Thermus thermophilus HB8
分子名称: MALATE DEHYDROGENASE
著者Hirose, R, Hasegawa, T, Yamano, A, Kuramitsu, S, Hamada, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-10-01
公開日2002-10-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Malate Dehydrogenase from Thermus themrophilus HB8
To be published
1WV8
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Crystal structure of hypothetical protein TTHA1013 from an extremely thermophilic bacterium thermus thermophilus HB8
分子名称: hypothetical protein TTHA1013
著者Mizohata, E, Hattori, M, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-12
公開日2005-06-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the hypothetical protein TTHA1013 from Thermus thermophilus HB8
Proteins, 61, 2005
1WWM
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Crystal Structure of Conserved Hypothetical Protein TT2028 from an Extremely Thermophilic Bacterium Thermus thermophilus HB8
分子名称: hypothetical protein TT2028
著者Mizohata, E, Ushikoshi-Nakayama, R, Terada, T, Murayama, K, Sakai, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-07
公開日2005-07-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Crystal Structure of TT2028 from an Extremely Thermophilic Bacterium Thermus thermophilus HB8
To be Published
1WKI
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solution structure of ribosomal protein L16 from thermus thermophilus HB8
分子名称: LSU ribosomal protein L16P
著者Nishimura, M, Yoshida, T, Shirouzu, M, Terada, T, Kuramitsu, S, Yokoyama, S, Ohkubo, T, Kobayashi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-31
公開日2004-12-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of Ribosomal Protein L16 from Thermus thermophilus HB8
J.Mol.Biol., 344, 2004
1YOA
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Crystal structure of a probable flavoprotein from Thermus thermophilus HB8
分子名称: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, putative flavoprotein
著者Imagawa, T, Tsuge, H, Sugimoto, Y, Utsunomiya, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-27
公開日2005-07-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a flavoenzyme TTHA0420 from Thermus thermophilus HB8
To be published
1WYV
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Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in inhibitor-bound form
分子名称: (AMINOOXY)ACETIC ACID, PYRIDOXAL-5'-PHOSPHATE, glycine dehydrogenase (decarboxylating) subunit 1, ...
著者Nakai, T, Nakagawa, N, Maoka, N, Masui, R, Kuramitsu, S, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-17
公開日2005-04-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of P-protein of the glycine cleavage system: implications for nonketotic hyperglycinemia
Embo J., 24, 2005

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