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PDB: 468 results

1IQU
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BU of 1iqu by Molmil
Crystal structure of photolyase-thymine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, THYMINE, ...
Authors:Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-08-03
Release date:2002-05-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
2YVO
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BU of 2yvo by Molmil
Crystal structure of NDX2 in complex with MG2+ and AMP from thermus thermophilus HB8
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, MutT/nudix family protein
Authors:Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-13
Release date:2008-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
3EOQ
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BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
Descriptor: Putative zinc protease
Authors:Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
Deposit date:2008-09-29
Release date:2009-03-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
2D4P
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BU of 2d4p by Molmil
Crystal structure of TTHA1254 (wild type) from Thermus thermophilus HB8
Descriptor: hypothetical protein TTHA1254
Authors:Mizohata, E, Uchikubo, T, Kinoshita, Y, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-10-21
Release date:2006-04-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of TTHA1254 (wild type) from Thermus thermophilus HB8
To be Published
2ECE
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BU of 2ece by Molmil
X-ray structure of hypothetical selenium-binding protein from Sulfolobus tokodaii, ST0059
Descriptor: 462aa long hypothetical selenium-binding protein
Authors:Yamada, M, Yoshida, H, Kuramitsu, S, Kamitori, S.
Deposit date:2007-02-13
Release date:2008-01-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of hypothetical selenium-binding protein from Sulfolobus tokodaii, ST0059
To be Published
3HJE
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BU of 3hje by Molmil
Crystal structure of sulfolobus tokodaii hypothetical maltooligosyl trehalose synthase
Descriptor: 704aa long hypothetical glycosyltransferase, GLYCEROL
Authors:Cielo, C.B.C, Okazaki, S, Suzuki, A, Mizushima, T, Masui, R, Kuramitsu, S, Yamane, T.
Deposit date:2009-05-21
Release date:2010-04-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of ST0929, a putative glycosyl transferase from Sulfolobus tokodaii
Acta Crystallogr.,Sect.F, 66, 2010
2EA9
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BU of 2ea9 by Molmil
Crystal structure of a hypothetical protein JW2626 from E.coli
Descriptor: Hypothetical protein yfjZ
Authors:Okazaki, N, Kuramitsu, S, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-31
Release date:2007-07-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a hypothetical protein JW2626 from E.coli
To be Published
4NZY
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BU of 4nzy by Molmil
Crystal structure (type-2) of dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
Deposit date:2013-12-13
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Insight into Substrate Binding Mechanism in Thymidylate Kinase based on Intrinsic Dynamics of the Active Site
To be Published
2EG2
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BU of 2eg2 by Molmil
The crystal structure of PII protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Nitrogen regulatory protein P-II
Authors:Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The crystal structure of PII protein
To be Published
2YYB
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BU of 2yyb by Molmil
Crystal structure of TTHA1606 from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA1606
Authors:Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-28
Release date:2008-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8.
Proteins, 76, 2009
2DQB
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BU of 2dqb by Molmil
Crystal structure of dNTP triphosphohydrolase from Thermus thermophilus HB8, which is homologous to dGTP triphosphohydrolase
Descriptor: Deoxyguanosinetriphosphate triphosphohydrolase, putative, MAGNESIUM ION
Authors:Kondo, N, Nakagawa, N, Ebihara, A, Chen, L, Liu, Z.-J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-25
Release date:2007-01-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of dNTP-inducible dNTP triphosphohydrolase: insight into broad specificity for dNTPs and triphosphohydrolase-type hydrolysis
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
2EG1
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BU of 2eg1 by Molmil
The crystal structure of PII protein
Descriptor: CHLORIDE ION, Nitrogen regulatory protein P-II, SULFATE ION
Authors:Sakai, H, Shinkai, A, Kitamura, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-27
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of PII protein
To be Published
2EJ5
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BU of 2ej5 by Molmil
Crystal structure of GK2038 protein (enoyl-CoA hydratase subunit II) from Geobacillus kaustophilus
Descriptor: Enoyl-CoA hydratase subunit II
Authors:Okazaki, N, Agari, Y, Ebihara, A, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Kuramitsu, S, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-15
Release date:2007-09-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of GK2038 protein (enoyl-CoA hydratase subunit II) from Geobacillus kaustophilus
To be Published
2CU3
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BU of 2cu3 by Molmil
Crystal structure of TT1568 from Thermus thermophilus HB8
Descriptor: CADMIUM ION, unknown function protein
Authors:Sugahara, M, Satoh, S, Ebihara, A, Kuramitsu, S, Yokoyama, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-25
Release date:2006-05-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of TT1568 from Thermus thermophilus HB8
To be Published
2YWA
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BU of 2ywa by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Descriptor: Hypothetical protein TTHA0048
Authors:Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2YZI
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BU of 2yzi by Molmil
Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii
Descriptor: Hypothetical protein PH0107
Authors:Kanagawa, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii
To be Published
1IUH
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BU of 1iuh by Molmil
Crystal structure of TT0787 of thermus thermophilus HB8
Descriptor: 2'-5' RNA Ligase
Authors:Kato, M, Sakai, H, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-05
Release date:2003-06-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the 2'-5' RNA Ligase from Thermus thermophilus HB8
J.MOL.BIOL., 329, 2003
2YZT
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BU of 2yzt by Molmil
Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Descriptor: Putative uncharacterized protein TTHA1756
Authors:Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of uncharacterized protein TTHA1756 from Thermus thermophilus HB8: Structural variety in UPF0150 family proteins.
Proteins, 71, 2008
1IQR
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BU of 1iqr by Molmil
Crystal structure of DNA photolyase from Thermus thermophilus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, photolyase
Authors:Komori, H, Masui, R, Kuramitsu, S, Yokoyama, S, Shibata, T, Inoue, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-07-27
Release date:2001-11-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
Proc.Natl.Acad.Sci.USA, 98, 2001
2ZCA
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BU of 2zca by Molmil
Crystal Structure of TTHB189, a CRISPR-associated protein, Cse2 family from Thermus thermophilus HB8
Descriptor: Putative uncharacterized protein TTHB189
Authors:Agari, Y, Shinkai, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-08
Release date:2008-10-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermophilus HB8
Proteins, 73, 2008
2DCN
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BU of 2dcn by Molmil
Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate (alpha-furanose form)
Descriptor: 6-O-phosphono-beta-D-psicofuranosonic acid, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Okazaki, S, Onda, H, Suzuki, A, Kuramitsu, S, Masui, R, Yamane, T.
Deposit date:2006-01-10
Release date:2006-01-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of 2-keto-3-deoxygluconate kinase from Sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate
To be Published
2ZDJ
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BU of 2zdj by Molmil
Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
Descriptor: hypothetical protein TTMA177
Authors:Agari, Y, Tamakoshi, M, Yamagishi, A, Shinkai, A, Ebihara, A, Yokoyama, S, Kuramitsu, S, Oshima, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-26
Release date:2008-12-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
To be Published
3U6U
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BU of 3u6u by Molmil
Crystal structure of the putative acetylglutamate kinase from thermus thermophilus
Descriptor: Putative acetylglutamate kinase, SULFATE ION
Authors:Karthe, P, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-10-13
Release date:2011-11-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
To be Published
3HJN
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BU of 3hjn by Molmil
Crystal structure of thymidylate kinase in complex with dTDP and ADP from Thermotoga maritima
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Yoshikawa, S, Nakagawa, N, Shirouzu, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-05-22
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of thymidylate kinase in complex with dTDP and ADP from Thermotoga maritima
To be Published
2EQA
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BU of 2eqa by Molmil
Crystal Structure of the hypothetical Sua5 protein from Sulfolobus tokodaii
Descriptor: ADENOSINE MONOPHOSPHATE, Hypothetical protein ST1526, MAGNESIUM ION
Authors:Agari, Y, Shinkai, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of a hypothetical Sua5 protein from Sulfolobus tokodaii strain 7
Proteins, 70, 2008

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