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PDB: 16 results

8H17
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Crystal structure of the Globin domain of Thermosynechococcus elongatus BP-1
Descriptor: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, Tlr1989 protein
Authors:Mathur, S, Yadav, S.K, Pal, K.R, Kundu, S.
Deposit date:2022-09-30
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A novel single sensor hemoglobin domain from the thermophilic cyanobacteria Thermosynechococcus elongatus BP-1 exhibits higher pH but lower thermal stability compared to globins from mesophilic organisms.
Int.J.Biol.Macromol., 240, 2023
3ZHW
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X-ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and their Functional Implications
Descriptor: NON-SYMBIOTIC HEMOGLOBIN 1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Mukhi, N, Dhindwal, S, Uppal, S, Kumar, P, Kaur, J, Kundu, S.
Deposit date:2012-12-30
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications
Biochim.Biophys.Acta, 1834, 2013
1RTX
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BU of 1rtx by Molmil
Crystal Structure of Synechocystis Hemoglobin with a Covalent Heme Linkage
Descriptor: CADMIUM ION, Cyanoglobin, POTASSIUM ION, ...
Authors:Hoy, J.A, Kundu, S, Trent, J.T, Ramaswamy, S, Hargrove, M.S.
Deposit date:2003-12-10
Release date:2004-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of synechocystis hemoglobin with a covalent heme linkage.
J.Biol.Chem., 279, 2004
4C44
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Crystal Structure of Truncated Plant Hemoglobin from Arabidopsis thaliana
Descriptor: 2-ON-2 HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Mukhi, N, Dhindwal, S, Kumar, P, Kaur, J, Kundu, S.
Deposit date:2013-08-30
Release date:2014-09-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:X-Ray Crystallographic Structural Characteristics of Truncated Hemoglobin from Arabidopsis Thaliana
To be Published
1S6A
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BU of 1s6a by Molmil
The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with azide ligand
Descriptor: AZIDE ION, CITRATE ANION, Cyanoglobin, ...
Authors:Trent III, J.T, Kundu, S, Hoy, J.A, Hargrove, M.S.
Deposit date:2004-01-22
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin.
J.Mol.Biol., 341, 2004
1S69
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BU of 1s69 by Molmil
The X-ray structure of the cyanobacteria Synechocystis hemoglobin "cyanoglobin" with cyanide ligand
Descriptor: CITRATE ANION, CYANIDE ION, Cyanoglobin, ...
Authors:Trent III, J.T, Kundu, S, Hoy, J.A, Hargrove, M.S.
Deposit date:2004-01-22
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin.
J.Mol.Biol., 341, 2004
5ZWT
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BU of 5zwt by Molmil
Crystal structure of the S37A mutant of apo-acyl carrier protein from Leishmania major
Descriptor: Acyl carrier protein
Authors:Sharma, B, Arya, R, Kundu, S, Makde, R.D.
Deposit date:2018-05-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
5ZWS
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Crystal structure of apo-acyl carrier protein from Leishmania major
Descriptor: Acyl carrier protein
Authors:Arya, R, Sharma, B, Makde, R.D, Kundu, S.
Deposit date:2018-05-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A conformational switch from a closed apo- to an open holo-form equips the acyl carrier protein for acyl chain accommodation.
Biochim Biophys Acta Proteins Proteom, 1867, 2018
6JOE
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Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor
Descriptor: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase, ...
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2019-03-20
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
6JOF
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Crystal structure of TrmD from Mycobacterium tuberculosis in complex with active-site inhibitor
Descriptor: tRNA (guanine-N(1)-)-methyltransferase, ~{N}-[[4-[(4-azanylpiperidin-1-yl)methyl]phenyl]methyl]-4-oxidanylidene-3~{H}-thieno[2,3-d]pyrimidine-5-carboxamide
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2019-03-20
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5ZHM
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BU of 5zhm by Molmil
Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor
Descriptor: N-({4-[(diethylamino)methyl]phenyl}methyl)-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide, S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5ZHJ
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Crystal structure of TrmD from Mycobacterium tuberculosis in complex with S-adenosyl homocysteine (SAH)
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5ZHI
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BU of 5zhi by Molmil
Apo crystal structure of TrmD from Mycobacterium tuberculosis
Descriptor: tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5ZHK
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BU of 5zhk by Molmil
Crystal structure of TrmD from Mycobacterium tuberculosis in complex with active-site inhibitor
Descriptor: N-[(4-{[cyclohexyl(ethyl)amino]methyl}phenyl)methyl]-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5ZHN
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BU of 5zhn by Molmil
Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor
Descriptor: N-({4-[(octylamino)methyl]phenyl}methyl)-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019
5ZHL
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BU of 5zhl by Molmil
Crystal structure of TrmD from Mycobacterium tuberculosis in complex with active-site inhibitor
Descriptor: N-({4-[(octylamino)methyl]phenyl}methyl)-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
Authors:Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
Deposit date:2018-03-13
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019

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PDB entries from 2024-07-17

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