Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 259 results

5YQ8
DownloadVisualize
BU of 5yq8 by Molmil
Crystal structure of retroviral protease-like domain of Ddi1 from Leishmania major
Descriptor: DNA-damage inducible protein DDI1-like protein
Authors:Suguna, K, Kumar, S.
Deposit date:2017-11-06
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the retroviral protease-like domain of a protozoal DNA damage-inducible 1 protein.
FEBS Open Bio, 8, 2018
5YS4
DownloadVisualize
BU of 5ys4 by Molmil
Crystal structure of retroviral protease-like domain of Ddi1 from Leishmania major
Descriptor: DNA-damage inducible protein DDI1-like protein
Authors:Suguna, K, Kumar, S.
Deposit date:2017-11-13
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the retroviral protease-like domain of a protozoal DNA damage-inducible 1 protein.
FEBS Open Bio, 8, 2018
4LGX
DownloadVisualize
BU of 4lgx by Molmil
Structure of Chitinase D from Serratia proteamaculans revealed an unusually constrained substrate binding site
Descriptor: ACETATE ION, GLYCEROL, Glycoside hydrolase family 18
Authors:Madhuprakash, J, Singh, A, Kumar, S, Sinha, M, Kaur, P, Sharma, S, Podile, A.R, Singh, T.P.
Deposit date:2013-06-30
Release date:2013-10-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Inverse relationship between chitobiase and transglycosylation activities of chitinase-D from Serratia proteamaculans revealed by mutational and biophysical analyses.
Sci Rep, 5, 2015
5J3Q
DownloadVisualize
BU of 5j3q by Molmil
Crystal structure of S. pombe Dcp1:Edc1 mRNA decapping complex
Descriptor: Edc1, mRNA-decapping enzyme subunit 1
Authors:Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
Deposit date:2016-03-31
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
5J3T
DownloadVisualize
BU of 5j3t by Molmil
Crystal structure of S. pombe Dcp2:Dcp1:Edc1 mRNA decapping complex
Descriptor: Edc1, FORMIC ACID, MAGNESIUM ION, ...
Authors:Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
Deposit date:2016-03-31
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
5J3Y
DownloadVisualize
BU of 5j3y by Molmil
Crystal structure of S. pombe Dcp2:Dcp1 mRNA decapping complex
Descriptor: mRNA decapping complex subunit 2, mRNA-decapping enzyme subunit 1
Authors:Valkov, E, Muthukumar, S, Chang, C.T, Jonas, S, Weichenrieder, O, Izaurralde, E.
Deposit date:2016-03-31
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.288 Å)
Cite:Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation.
Nat.Struct.Mol.Biol., 23, 2016
1KEB
DownloadVisualize
BU of 1keb by Molmil
Crystal Structure of Double Mutant M37L,P40S E.coli Thioredoxin
Descriptor: COPPER (II) ION, Thioredoxin 1
Authors:Rudresh, Jain, R, Dani, V, Mitra, A, Srivastava, S, Sarma, S.P, Varadarajan, R, Ramakumar, S.
Deposit date:2001-11-15
Release date:2002-11-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Consequences of Replacement of an alpha-helical Pro Residue in E.coli Thioredoxin
PROTEIN ENG., 15, 2002
4DKY
DownloadVisualize
BU of 4dky by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, MANGANESE (II) ION
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2012-02-05
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.478 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
4LP2
DownloadVisualize
BU of 4lp2 by Molmil
Crystal structure of monomeric ligand binding domain of S. typhimurium CysB, a LysR transcriptional regulator at 2.2A
Descriptor: HTH-type transcriptional regulator CysB
Authors:Mittal, M, Singh, A.K, Kumaran, S.
Deposit date:2013-07-15
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of monomeric ligand binding domain of S. typhimurium CysB, a LysR transcriptional regulator at 2.2A
To be Published
5XCW
DownloadVisualize
BU of 5xcw by Molmil
Crystal structure of M92A-M120A double mutant of O-acetyl-L-serine sulfhydrylase from Haemophilus influenzae
Descriptor: Cysteine synthase
Authors:Abhishek, K, Kumaran, S.
Deposit date:2017-03-23
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Molecular Mechanism of Selective Substrate Engagement and Inhibitor Dis-engagement of Cysteine Synthase.
J.Biol.Chem., 2020
5XCP
DownloadVisualize
BU of 5xcp by Molmil
Crystal structure of M92A mutant of O-acetyl-L-serine sulfhydrylase from Haemophilus influenzae
Descriptor: Cysteine synthase
Authors:Abhishek, K, Kumaran, S.
Deposit date:2017-03-23
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.043 Å)
Cite:Molecular Mechanism of Selective Substrate Engagement and Inhibitor Dis-engagement of Cysteine Synthase.
J.Biol.Chem., 2020
5XCN
DownloadVisualize
BU of 5xcn by Molmil
Crystal structure of M120A mutant of O-acetyl-L-serine sulfahydrylase from Haemophilus influenzae
Descriptor: Cysteine synthase
Authors:Abhishek, K, Kumaran, S.
Deposit date:2017-03-23
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Molecular Mechanism of Selective Substrate Engagement and Inhibitor Dis-engagement of Cysteine Synthase.
J.Biol.Chem., 2020
1TUX
DownloadVisualize
BU of 1tux by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF A THERMOSTABLE XYLANASE FROM THERMOASCUS AURANTIACUS
Descriptor: XYLANASE
Authors:Natesh, R, Bhanumoorthy, P, Vithayathil, P.J, Sekar, K, Ramakumar, S, Viswamitra, M.A.
Deposit date:1998-10-29
Release date:1999-07-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure at 1.8 A resolution and proposed amino acid sequence of a thermostable xylanase from Thermoascus aurantiacus.
J.Mol.Biol., 288, 1999
8JZA
DownloadVisualize
BU of 8jza by Molmil
Crystal structure of single domain antibody kt75 of human Thyroglobulin
Descriptor: ACETATE ION, POTASSIUM ION, single domain antibody kt75 of human Thyroglobulin
Authors:Mistry, H, Kumarasamy, J, Kumari, S, Kulkarni, S.P, Gupta, G.D.
Deposit date:2023-07-04
Release date:2024-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of single domain antibody kt75 of human Thyroglobulin
To Be Published
4LON
DownloadVisualize
BU of 4lon by Molmil
Crystal structure of monomeric sulphate free form of ligand binding domain of CysB,an LTTR from Salmonella typhimurium LT2
Descriptor: HTH-type transcriptional regulator CysB
Authors:Mittal, M, Singh, A.K, Kumaran, S.
Deposit date:2013-07-13
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of monomeric sulphate free form of ligand binding domain of CysB,an LTTR from Salmonella typhimurium LT2
To be Published
4M4G
DownloadVisualize
BU of 4m4g by Molmil
Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium LT2 in complex with effector ligand, N-acetylserine.
Descriptor: DI(HYDROXYETHYL)ETHER, HTH-type transcriptional regulator CysB, N-ACETYL-SERINE
Authors:Mittal, M, Singh, A.K, Kumaran, S.
Deposit date:2013-08-07
Release date:2014-08-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium LT2 in complex with effector ligand, N-acetylserine
To be Published
4LQ5
DownloadVisualize
BU of 4lq5 by Molmil
Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium LT2 in complex with effector ligand, O-acetylserine at 2.8A
Descriptor: HTH-type transcriptional regulator CysB, O-ACETYLSERINE
Authors:Mittal, M, Singh, A.K, Kumaran, S.
Deposit date:2013-07-17
Release date:2014-07-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:rystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium LT2 in complex with effector ligand, O-acetylserine at 2.8A
TO BE PUBLISHED
4LQ2
DownloadVisualize
BU of 4lq2 by Molmil
Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium in complex with effector ligand, O-acetylserine
Descriptor: HTH-type transcriptional regulator CysB, O-ACETYLSERINE
Authors:Mittal, M, Singh, A.K, Kumaran, S.
Deposit date:2013-07-17
Release date:2014-08-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.694 Å)
Cite:Crystal structure of ligand binding domain of CysB, a LysR member from Salmonella typhimurium in complex with effector ligand, O-acetylserine
TO BE PUBLISHED
5XC0
DownloadVisualize
BU of 5xc0 by Molmil
Crystal structure of an aromatic mutant (W6A) of an alkali thermostable GH10 Xylanase from Bacillus sp. NG-27
Descriptor: Beta-xylanase, MAGNESIUM ION, SODIUM ION
Authors:Bansia, H, Mahanta, P, Ramakumar, S.
Deposit date:2017-03-21
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches.
J.Chem.Inf.Model., 2021
5XA2
DownloadVisualize
BU of 5xa2 by Molmil
Crystal Structure of O-acetylserine sulfhydrylase from Planctomyces Limnophila
Descriptor: Cysteine synthase
Authors:Singh, R.P, Kumaran, S.
Deposit date:2017-03-10
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.034 Å)
Cite:Crystal Structure of O-acetylserine sulfhydrylase from Planctomyces Limnophila
To Be Published
8HKR
DownloadVisualize
BU of 8hkr by Molmil
Crystal Structure of Histone H3 Lysine 79 (H3K79) Methyltransferase Rv2067c from Mycobacterium tuberculosis
Descriptor: PHOSPHATE ION, Protein lysine methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Dadireddy, V, Singh, P.R, Kalladi, S.M, Valakunja, N, Ramakumar, S.
Deposit date:2022-11-28
Release date:2023-10-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Mycobacterium tuberculosis methyltransferase Rv2067c manipulates host epigenetic programming to promote its own survival.
Nat Commun, 14, 2023
2QQ1
DownloadVisualize
BU of 2qq1 by Molmil
Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
Descriptor: Molybdenum cofactor biosynthesis MOG
Authors:Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-07-26
Release date:2008-07-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
To be Published
2PBQ
DownloadVisualize
BU of 2pbq by Molmil
Crystal structure of molybdenum cofactor biosynthesis (aq_061) From aquifex aeolicus VF5
Descriptor: Molybdenum cofactor biosynthesis MOG
Authors:Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of molybdenum cofactor biosynthesis (aq_061) from aquifex aeolicus VF5
to be published
4RR6
DownloadVisualize
BU of 4rr6 by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA (snapshot 1)
Descriptor: Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
Authors:Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRH
DownloadVisualize
BU of 4rrh by Molmil
K116M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA
Descriptor: MAGNESIUM ION, Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
Authors:Ahmad, S, Muthukumar, S, Sankaranarayanan, R.
Deposit date:2014-11-06
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015

227111

数据于2024-11-06公开中

PDB statisticsPDBj update infoContact PDBjnumon