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PDB: 140 results

2YVV
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Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites
Descriptor: Hyaluronidase, phage associated, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Mishra, P, Prem Kumar, R, Singh, N, Sharma, S, Kaur, P, Perbandt, M, Betzel, C, Bhakuni, V, Singh, T.P.
Deposit date:2007-04-16
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites
To be Published
2YW0
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Crystal structure of hyluranidase trimer at 2.6 A resolution
Descriptor: Hyaluronidase, phage associated
Authors:Prem Kumar, R, Mishra, P, Singh, N, Perbandt, M, Kaur, P, Sharma, S, Betzel, C, Bhakuni, V, Singh, T.P.
Deposit date:2007-04-18
Release date:2007-05-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Polysaccharide binding sites in hyaluronate lyase--crystal structures of native phage-encoded hyaluronate lyase and its complexes with ascorbic acid and lactose
Febs J., 276, 2009
2YX2
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BU of 2yx2 by Molmil
Crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
Descriptor: Hyaluronidase, phage associated
Authors:Mishra, P, Prem Kumar, R, Bhakuni, V, Singh, N, Sharma, S, Kaur, P, Perbandt, M, Betzel, C, Singh, T.P.
Deposit date:2007-04-23
Release date:2007-05-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of cloned trimeric hyluranidase from streptococcus pyogenes at 2.8 A resolution
To be Published
3N2D
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BU of 3n2d by Molmil
Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-meric peptide from 60S acidic ribosomal protein P2-beta, Ribosome inactivating protein
Authors:Kushwaha, G.S, Prem Kumar, R, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-18
Release date:2010-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structure of the Complex of type I Ribosome inactivating protein with hexapeptide Ser-Asp-Asp-Asp-Met-Gly at 2.2 A resolution
To be Published
1H0Q
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NMR solution structure of a fully modified locked nucleic acid (LNA) hybridized to RNA
Descriptor: 5-D(*(LKC)P*(TLN)P*(LCG)P*(LCA)P*(TLN)P*(LCA)P* (TLN)P*(LCG)P*(LCC))-3, 5-R(*GP*CP*AP*UP*AP*UP*CP*AP*G)-3
Authors:Rasmussen, J, Petersen, M, Nielsen, K.E, Kumar, R, Wengel, J, Jacobsen, J.P.
Deposit date:2002-06-27
Release date:2003-07-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Studies of Fully Modified Locked Nucleic Acid (Lna) Hybrids: Solution Structure of an Lna:RNA Hybrid and Characterization of an Lna:RNA Hybrid
Bioconjug.Chem., 15, 2004
1I5W
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BU of 1i5w by Molmil
A-DNA DECAMER GCGTA(TLN)ACGC
Descriptor: 5'-D(*GP*CP*GP*TP*AP*(TLN)P*AP*CP*GP*C)-3'
Authors:Egli, M, Minasov, G, Teplova, M, Kumar, R, Wengel, J.
Deposit date:2001-03-01
Release date:2001-04-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray crystal structure of a locked nucleic acid (LNA) duplex composed of a palindromic 10-mer DNA strand containing one LNA thymine monomer
J.Chem.Soc.,Chem.Commun., 2001
3EKN
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BU of 3ekn by Molmil
Insulin receptor kinase complexed with an inhibitor
Descriptor: 2-fluoro-6-{[2-({2-methoxy-4-[4-(1-methylethyl)piperazin-1-yl]phenyl}amino)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}benzamide, Insulin receptor
Authors:Chamberlain, S, Atkins, C, Deanda, F, Dumble, M, Gerding, R, Groy, A, Korenchuk, S, Kumar, R, Lei, H, Mook, R, Moorthy, G, Redman, A, Rowland, J, Shewchuk, L.
Deposit date:2008-09-19
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Optimization of 4,6-bis-anilino-1H-pyrrolo[2,3-d]pyrimidine IGF-1R tyrosine kinase inhibitors towards JNK selectivity.
Bioorg.Med.Chem.Lett., 19, 2009
1P8V
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BU of 1p8v by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF PLATELET RECEPTOR GPIB-ALPHA AND ALPHA-THROMBIN AT 2.6A
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIISOPROPYL PHOSPHONATE, ...
Authors:Dumas, J.J, Kumar, R, Seehra, J, Somers, W.S, Mosyak, L.
Deposit date:2003-05-07
Release date:2003-07-22
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the GpIbalpha-Thrombin Complex Essential for Platelet Aggregation
Science, 301, 2003
1SQZ
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BU of 1sqz by Molmil
Design of specific inhibitors of Phopholipase A2: Crystal structure of the complex formed between Group II Phopholipase A2 and a designed peptide Dehydro-Ile-Ala-Arg-Ser at 1.2A resolution
Descriptor: Phospholipase A2, SULFATE ION, synthetic peptide
Authors:Singh, N, Prem Kumar, R, Somvanshi, R.K, Bilgrami, S, Ethayathulla, A.S, Sharma, S, Dey, S, Singh, T.P.
Deposit date:2004-03-22
Release date:2004-04-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Design of specific inhibitors of Phopholipase A2: Crystal structure of the complex formed between GroupII Phopholipase A2 and a designed peptide Dehydro-Ile-Ala-Arg-Ser at 1.2A resolution
To be Published
7LXD
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BU of 7lxd by Molmil
Structure of yeast DNA Polymerase Zeta (apo)
Descriptor: DNA polymerase delta small subunit, DNA polymerase delta subunit 3, DNA polymerase zeta catalytic subunit, ...
Authors:Truong, C.D, Craig, T.A, Cui, G, Botuyan, M.V, Serkasevich, R.A, Chan, K.-Y, Mer, G, Chiu, P.-L, Kumar, R.
Deposit date:2021-03-03
Release date:2021-06-30
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.11 Å)
Cite:Cryo-EM reveals conformational flexibility in apo DNA polymerase zeta.
J.Biol.Chem., 297, 2021
2DVC
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Structure of the bovine lactoferrin C-lobe complex with sucrose at 3.0 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Bhardwaj, R, Ethayathulla, A.S, Sinha, M, Singh, N, Bhushan, A, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2006-07-31
Release date:2006-08-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the bovine lactoferrin C-lobe complex with sucrose at 3.0 A resolution
To be Published
2DWA
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Structure of the complex of lactoferrin C-terminal half with fucose at 2.07 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Singh, N, Sinha, M, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2006-08-09
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure of the complex of lactoferrin C-terminal half with fucose at 2.07 A resolution
To be Published
2DWI
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Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and cellobiose at 2.2 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Prem Kumar, R, Mir, R, Sinha, M, Singh, N, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2006-08-13
Release date:2006-09-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and cellobiose at 2.2 A resolution
To be Published
2DXR
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BU of 2dxr by Molmil
Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and sorbitol at 2.85 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem kumar, R, Sinha, M, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2006-08-30
Release date:2006-09-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the complex formed between C-terminal half of bovine lactoferrin and sorbitol at 2.85 A resolution
To be Published
2DYX
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Structure of the complex of lactoferrin C-lobe with melibiose at 2.0 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem kumar, R, Sinha, M, Singh, N, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2006-09-19
Release date:2006-10-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the complex of lactoferrin C-lobe with melibiose at 2.0 A resolution
To be Published
2PGH
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BU of 2pgh by Molmil
STRUCTURE DETERMINATION OF AQUOMET PORCINE HEMOGLOBIN AT 2.8 ANGSTROM RESOLUTION
Descriptor: HEMOGLOBIN (AQUO MET) (ALPHA CHAIN), HEMOGLOBIN (AQUO MET) (BETA CHAIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Katz, D.S, White, S.P, Huang, W, Kumar, R, Christianson, D.W.
Deposit date:1994-09-16
Release date:1994-11-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure determination of aquomet porcine hemoglobin at 2.8 A resolution.
J.Mol.Biol., 244, 1994
2H4I
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Crystal structure of the complex of proteolytically produced C-terminal half of bovine lactoferrin with lactose at 2.55 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem kumar, R, Sinha, M, Singh, N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2006-05-24
Release date:2006-06-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the complex of proteolytically produced C-terminal half of bovine lactoferrin with lactose at 2.55 A resolution
To be Published
2HCA
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BU of 2hca by Molmil
Crystal structure of bovine lactoferrin C-lobe liganded with Glucose at 2.8 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Ethayathulla, A.S, Singh, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2006-06-15
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of bovine lactoferrin C-lobe liganded with Glucose at 2.8 A resolution
To be Published
2E1S
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Crystal structure of the complex of C-terminal half of bovine lactoferrin and arabinose at 2.7 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Singh, N, Sinha, M, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2006-10-27
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the complex of C-terminal half of bovine lactoferrin and arabinose at 2.7 A resolution
To be Published
2E0S
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BU of 2e0s by Molmil
Carbohydrate recognition of C-terminal half of lactoferrin: Crystal structure of the complex of C-lobe with rhamnose at 2.15 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Mir, R, Prem Kumar, R, Singh, N, Sinha, M, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2006-10-11
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Carbohydrate recognition of C-terminal half of lactoferrin: Crystal structure of the complex of C-lobe with rhamnose at 2.15 A resolution
To be Published
4E6K
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2.0 A resolution structure of Pseudomonas aeruginosa bacterioferritin (BfrB) in complex with bacterioferritin associated ferredoxin (Bfd)
Descriptor: Bacterioferritin, FE2/S2 (INORGANIC) CLUSTER, PHOSPHATE ION, ...
Authors:Lovell, S, Battaile, K.P, Yao, H, Wang, Y, Kumar, R, Ruvinsky, A, Vasker, I, Rivera, M.
Deposit date:2012-03-15
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of the BfrB-Bfd Complex Reveals Protein-Protein Interactions Enabling Iron Release from Bacterioferritin.
J.Am.Chem.Soc., 134, 2012
3NJU
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BU of 3nju by Molmil
Crystal structure of the complex of group I phospholipase A2 with 4-Methoxy-benzoicacid at 1.4A resolution
Descriptor: 4-METHOXYBENZOIC ACID, CALCIUM ION, Phospholipase A2 isoform 3
Authors:Kaushik, S, Prem Kumar, R, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-18
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the complex of group I phospholipase A2 with 4-Methoxy-benzoicacid at 1.4A resolution
To be Published
3RUW
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Crystal structure of Cpn-rls in complex with ADP-AlFx from Methanococcus maripaludis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Chaperonin, ...
Authors:Pereira, J.H, Ralston, C.Y, Douglas, N.R, Kumar, R, McAndrew, R.P, Knee, K.M, King, J.A, Frydman, J, Adams, P.D.
Deposit date:2011-05-05
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Mechanism of nucleotide sensing in group II chaperonins.
Embo J., 31, 2012
4M2P
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Crystal structure of a non-myristoylated C39D recoverin mutant with one calcium ion bound to EF-hand 3
Descriptor: CALCIUM ION, Recoverin
Authors:Prem Kumar, R, Ranaghan, M.J, Oprian, D.D.
Deposit date:2013-08-05
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin.
J.Biol.Chem., 288, 2013
4M2Q
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Crystal structure of non-myristoylated recoverin with Cysteine-39 oxidized to sulfenic acid
Descriptor: CALCIUM ION, Recoverin
Authors:Prem Kumar, R, Chakrabarti, K, Kern, D, Oprian, D.D.
Deposit date:2013-08-05
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Highly Conserved Cysteine of Neuronal Calcium-sensing Proteins Controls Cooperative Binding of Ca2+ to Recoverin.
J.Biol.Chem., 288, 2013

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数据于2024-07-24公开中

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