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PDB: 32 results

1CFD
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BU of 1cfd by Molmil
CALCIUM-FREE CALMODULIN
Descriptor: CALMODULIN
Authors:Kuboniwa, H, Tjandra, N, Grzesiek, S, Ren, H, Klee, C.B, Bax, A.
Deposit date:1995-10-18
Release date:1995-12-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of calcium-free calmodulin.
Nat.Struct.Biol., 2, 1995
1CFC
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BU of 1cfc by Molmil
CALCIUM-FREE CALMODULIN
Descriptor: CALMODULIN
Authors:Kuboniwa, H, Tjandra, N, Grzesiek, S, Ren, H, Klee, C.B, Bax, A.
Deposit date:1995-08-02
Release date:1995-12-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of calcium-free calmodulin.
Nat.Struct.Biol., 2, 1995
8ZYH
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BU of 8zyh by Molmil
Crystal structure of a cupin protein (tm1459, I49C-4py/H52A/H54A/C106D mutant) in copper (Cu) substituted form
Descriptor: COPPER (II) ION, Cupin type-2 domain-containing protein, HEXAETHYLENE GLYCOL
Authors:Morita, Y, Kubo, H, Matsumoto, R, Fujieda, N.
Deposit date:2024-06-17
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Copper center in artificial non-heme metalloenzyme
To Be Published
8ZYG
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BU of 8zyg by Molmil
Crystal structure of a cupin protein (tm1459, I49C-4py/H52A/C106D mutant) in copper (Cu) substituted form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Cupin type-2 domain-containing protein, ...
Authors:Morita, Y, Kubo, H, Matsumoto, R, Fujieda, N.
Deposit date:2024-06-17
Release date:2024-09-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Copper center in artificial non-heme metalloenzyme
To Be Published
7BUR
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BU of 7bur by Molmil
Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin
Descriptor: CITRIC ACID, Chalcone synthase 1, NARINGENIN
Authors:Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T.
Deposit date:2020-04-08
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
7BUS
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BU of 7bus by Molmil
Chalcone synthase from Glycine max (L.) Merr (soybean)
Descriptor: Chalcone synthase
Authors:Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T.
Deposit date:2020-04-08
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
1HNR
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BU of 1hnr by Molmil
H-NS (DNA-BINDING DOMAIN)
Descriptor: H-NS
Authors:Shindo, H, Iwaki, T, Ieda, R, Kurumizaka, H, Ueguchi, C, Mizuno, T, Morikawa, S, Nakamura, H, Kuboniwa, H.
Deposit date:1995-04-06
Release date:1995-07-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.
FEBS Lett., 360, 1995
1HNS
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BU of 1hns by Molmil
H-NS (DNA-BINDING DOMAIN)
Descriptor: H-NS
Authors:Shindo, H, Iwaki, T, Ieda, R, Kurumizaka, H, Ueguchi, C, Mizuno, T, Morikawa, S, Nakamura, H, Kuboniwa, H.
Deposit date:1995-04-06
Release date:1995-07-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.
FEBS Lett., 360, 1995
2RQY
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BU of 2rqy by Molmil
Solution structure and dynamics of mouse ARMET
Descriptor: Putative uncharacterized protein
Authors:Hoseki, J, Sasakawa, H, Yamaguchi, Y, Maeda, M, Kubota, H, Kato, K, Nagata, K.
Deposit date:2010-01-26
Release date:2010-04-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure and dynamics of mouse ARMET.
Febs Lett., 584, 2010
2IEZ
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BU of 2iez by Molmil
Crystal Structure of mouse Rab27b bound to GDP in monoclinic space group
Descriptor: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-27B
Authors:Chavas, L.M.G, Torii, S, Kamikubo, H, Kawasaki, M, Ihara, K, Kato, R, Kataoka, M, Izumi, T, Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IF0
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BU of 2if0 by Molmil
Crystal Structure of mouse Rab27b bound to GDP in monoclinic space group
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-27B
Authors:Chavas, L.M.G, Torii, S, Kamikubo, H, Kawasaki, M, Ihara, K, Kato, R, Kataoka, M, Izumi, T, Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
5AUR
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BU of 5aur by Molmil
Hydrogenobacter thermophilus cytochrome c552 dimer formed by domain swapping at N-terminal region
Descriptor: Cytochrome c-552, HEME C, IODIDE ION
Authors:Ren, C, Nagao, S, Yamanaka, M, Kamikubo, H, Komori, H, Shomura, Y, Higuchi, Y, Hirota, S.
Deposit date:2015-06-08
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552via the elongation of the major hinge loop.
Mol Biosyst, 11, 2015
7VF8
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BU of 7vf8 by Molmil
Crystal Structure of HasAp with Co-5-octaethyloxaporphyrinium cation
Descriptor: CITRIC ACID, Co-5-octaethyloxaporphyrinium cation, DI(HYDROXYETHYL)ETHER, ...
Authors:Takiguchi, A, Sakakibara, E, Sugimoto, H, Shoji, O, Shinokubo, H.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structure of HasAp with Co-5-octaethyloxaporphyrinium cation
To Be Published
7VF7
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BU of 7vf7 by Molmil
Crystal Structure of HasAp with Co-octaethylporphyrin
Descriptor: Co-octaethylporphyrin, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Takiguchi, A, Sakakibara, E, Sugimoto, H, Shoji, O, Shinokubo, H.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structure of HasAp with Co-octaethylporphyrin
To Be Published
4BBV
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BU of 4bbv by Molmil
The PB0 Photocycle Intermediate of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A.
Deposit date:2012-09-28
Release date:2012-11-14
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
4BBU
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BU of 4bbu by Molmil
The PR2 Photocycle Intermediate of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A.
Deposit date:2012-09-27
Release date:2012-11-14
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
4B9O
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BU of 4b9o by Molmil
The PR0 Photocycle Intermediate of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A.
Deposit date:2012-09-06
Release date:2012-11-14
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography
Proc.Natl.Acad.Sci.USA, 109, 2012
4BBT
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BU of 4bbt by Molmil
The PR1 Photocycle Intermediate of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A.
Deposit date:2012-09-27
Release date:2012-11-14
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
2IEY
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BU of 2iey by Molmil
Crystal Structure of mouse Rab27b bound to GDP in hexagonal space group
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-27B
Authors:Chavas, L.M.G, Torii, S, Kamikubo, H, Kawasaki, M, Ihara, K, Kato, R, Kataoka, M, Izumi, T, Wakatsuki, S.
Deposit date:2006-09-19
Release date:2007-05-01
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
5H18
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BU of 5h18 by Molmil
Crystal structure of catalytic domain of UGGT (UDP-glucose-bound form) from Thermomyces dupontii
Descriptor: CALCIUM ION, GLYCEROL, UGGT, ...
Authors:Satoh, T, Zhu, T, Toshimori, T, Kamikubo, H, Uchihashi, T, Kato, K.
Deposit date:2016-10-08
Release date:2017-09-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
3VHX
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BU of 3vhx by Molmil
The crystal structure of Arf6-MKLP1 (Mitotic kinesin-like protein 1) complex
Descriptor: ADP-ribosylation factor 6, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Makyio, H, Takei, T, Ohgi, H, Takahashi, S, Takatsu, H, Ueda, T, Kanaho, Y, Xie, Y, Shin, H.W, Kamikubo, H, Kataoka, M, Kawasaki, M, Kato, R, Wakatsuki, S, Nakayama, K.
Deposit date:2011-09-12
Release date:2012-05-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural basis for Arf6-MKLP1 complex formation on the Flemming body responsible for cytokinesis
Embo J., 31, 2012
3X39
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BU of 3x39 by Molmil
Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551
Descriptor: Cytochrome c-551, HEME C
Authors:Nagao, S, Ueda, M, Osuka, H, Komori, H, Kamikubo, H, Kataoka, M, Higuchi, Y, Hirota, S.
Deposit date:2015-01-16
Release date:2015-04-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Domain-Swapped Dimer of Pseudomonas aeruginosa Cytochrome c551: Structural Insights into Domain Swapping of Cytochrome c Family Proteins
Plos One, 10, 2015
5Y7O
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BU of 5y7o by Molmil
Crystal structure of folding sensor region of UGGT from Thermomyces dupontii
Descriptor: UGGT
Authors:Satoh, T, Song, C, Zhu, T, Toshimori, T, Murata, K, Hayashi, Y, Kamikubo, H, Uchihashi, T, Kato, K.
Deposit date:2017-08-17
Release date:2017-09-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
3WC8
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BU of 3wc8 by Molmil
Dimeric horse cytochrome c obtained by refolding with desalting method
Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, HEME C, ...
Authors:Parui, P.P, Deshpande, M.S, Nagao, S, Kamikubo, H, Komori, H, Higuchi, Y, Kataoka, M, Hirota, S.
Deposit date:2013-05-25
Release date:2013-12-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Formation of Oligomeric Cytochrome c during Folding by Intermolecular Hydrophobic Interaction between N- and C-Terminal alpha-Helices
Biochemistry, 52, 2013
6AIT
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BU of 6ait by Molmil
Crystal structure of E. coli BepA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-barrel assembly-enhancing protease, ZINC ION
Authors:Umar, M.S.M, Tanaka, Y, Kamikubo, H, Tsukazaki, T.
Deposit date:2018-08-24
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Structural Basis for the Function of the beta-Barrel Assembly-Enhancing Protease BepA.
J. Mol. Biol., 431, 2019

 

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