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PDB: 2433 results

2CWX
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Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
Descriptor: Ribulose bisphosphate carboxylase
Authors:Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
To be Published
2CR6
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BU of 2cr6 by Molmil
Solution structure of the Ig domain (2998-3100) of human obscurin
Descriptor: KIAA1556 protein
Authors:Nagashima, K, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-20
Release date:2005-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Ig domain (2998-3100) of human obscurin
To be Published
2CXX
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Crystal structure of a probable GTP-binding protein engB
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Probable GTP-binding protein engB
Authors:Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-01
Release date:2006-01-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a probable GTP-binding protein engB
To be Published
2CV8
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BU of 2cv8 by Molmil
Crystal structure of tRNA-intron endonuclease from Sulfolobus tokodaii
Descriptor: CHLORIDE ION, tRNA-splicing endonuclease
Authors:Kato-Murayama, M, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-01
Release date:2005-12-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of tRNA-intron endonuclease from Sulfolobus tokodaii
To be Published
2CU1
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BU of 2cu1 by Molmil
Solution structure of the PB1 domain of human protein kinase MEKK2b
Descriptor: Mitogen-activated protein kinase kinase kinase 2
Authors:Inoue, K, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-24
Release date:2005-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PB1 domain of human protein kinase MEKK2b
To be published
2CYY
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BU of 2cyy by Molmil
Crystal structure of PH1519 from Pyrococcus horikosii OT3
Descriptor: CALCIUM ION, GLUTAMINE, Putative HTH-type transcriptional regulator PH1519
Authors:Okazaki, N, Nakano, N, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-08
Release date:2006-09-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of PH1519 from Pyrococcus horikosii OT3
To be Published
2D96
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BU of 2d96 by Molmil
Solution structure of the Death domain of Nuclear factor NF-kappa-B p100
Descriptor: Nuclear factor NF-kappa-B p100 subunit
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-12-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Death domain of Nuclear factor NF-kappa-B p100
to be published
2D8Z
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BU of 2d8z by Molmil
Solution structure of the third LIM domain of Four and a half LIM domains protein 2 (FHL-2)
Descriptor: Four and a half LIM domains 2, ZINC ION
Authors:Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-06-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the third LIM domain of Four and a half LIM domains protein 2 (FHL-2)
To be published
2D9J
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BU of 2d9j by Molmil
Solution structure of the RGS domain of Regulator of G-protein signaling 7
Descriptor: Regulator of G-protein signalling 7
Authors:Zhang, H.P, Nagasima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-09
Release date:2006-12-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RGS domain of Regulator of G-protein signaling 7
to be published
2D90
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BU of 2d90 by Molmil
Solution structure of the third PDZ domain of PDZ domain containing protein 1
Descriptor: PDZ domain containing protein 1
Authors:Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-12-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the third PDZ domain of PDZ domain containing protein 1
To be published
2D9K
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BU of 2d9k by Molmil
Solution structure of the zf-TRAF domain of FLN29 gene product
Descriptor: FLN29 gene product, ZINC ION
Authors:Suetake, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-10
Release date:2006-06-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zf-TRAF domain of FLN29 gene product
To be Published
2D92
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BU of 2d92 by Molmil
Solution structure of the fifth PDZ domain of InaD-like protein
Descriptor: InaD-like protein
Authors:Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-08
Release date:2006-06-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the fifth PDZ domain of InaD-like protein
to be published
3WOE
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BU of 3woe by Molmil
Crystal structure of P23-45 gp39 (6-109) bound to Thermus thermophilus RNA polymerase beta-flap domain
Descriptor: DNA-directed RNA polymerase subunit beta, Putative uncharacterized protein
Authors:Tagami, S, Sekine, S, Minakhin, L, Esyunina, D, Akasaka, R, Shirouzu, M, Kulbachinskiy, A, Severinov, K, Yokoyama, S.
Deposit date:2013-12-26
Release date:2014-03-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:Structural basis for promoter specificity switching of RNA polymerase by a phage factor.
Genes Dev., 28, 2014
2D8H
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BU of 2d8h by Molmil
Solution structure of the SH3 domain of Hypothetical protein SH3YL1
Descriptor: SH3YL1 protein
Authors:Qin, X.R, Nagasima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-06
Release date:2006-06-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of Hypothetical protein SH3YL1
To be published
2PCR
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BU of 2pcr by Molmil
Crystal structure of Myo-inositol-1(or 4)-monophosphatase (aq_1983) from Aquifex Aeolicus VF5
Descriptor: Inositol-1-monophosphatase
Authors:Jeyakanthan, J, Gayathri, D, Velmurugan, D, Agari, Y, Bessho, Y, Ellis, M.J, Antonyuk, S.V, Strange, R.W, Hasnain, S.S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Myo-inositol-1(or 4)-monophosphatase (aq_1983) from Aquifex Aeolicus VF5
To be Published
2OMD
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BU of 2omd by Molmil
Crystal structure of molybdopterin converting factor subunit 2 (aq_2181) from aquifex aeolicus VF5
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-22
Release date:2008-01-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of molybdopterin converting factor subunit 2 (aq_2181) from aquifex aeolicus VF5
To be Published
2OM6
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BU of 2om6 by Molmil
Hypothetical Protein (Probable Phosphoserine Phosph (PH0253) from Pyrococcus Horikoshii OT3
Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable phosphoserine phosphatase, ...
Authors:Jeyakanthan, J, Vaijayanthimala, S, Gayathri, D, Velmurugan, D, Baba, S, Ebihara, A, Shinkai, A, Kuramitsu, S, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-21
Release date:2008-01-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hypothetical Protein (Probable Phosphoserine Phosph (PH0253) from Pyrococcus Horikoshii OT3
To be Published
2YRL
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BU of 2yrl by Molmil
Solution structure of the PKD domain from KIAA 1837 protein
Descriptor: KIAA1837 protein
Authors:Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PKD domain from KIAA 1837 protein
To be Published
6KGL
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BU of 6kgl by Molmil
LSD1-CoREST-S2101 N5 adduct model
Descriptor: 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Niwa, H, Sato, S, Sengoku, S, Umehara, T, Yokoyama, S.
Deposit date:2019-07-12
Release date:2020-03-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Development and Structural Evaluation of N-Alkylated trans-2-Phenylcyclopropylamine-Based LSD1 Inhibitors.
Chemmedchem, 15, 2020
2PCJ
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BU of 2pcj by Molmil
Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5
Descriptor: Lipoprotein-releasing system ATP-binding protein lolD, SULFITE ION
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5
To be Published
2YWQ
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BU of 2ywq by Molmil
Crystal structure of Thermus thermophilus Protein Y N-terminal domain
Descriptor: Ribosomal subunit interface protein
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Saito, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-21
Release date:2008-04-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of Thermus thermophilus Protein Y N-terminal domain
To be Published
2PBR
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BU of 2pbr by Molmil
Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
Descriptor: SULFATE ION, Thymidylate kinase
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
To be Published
5B6O
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BU of 5b6o by Molmil
Crystal structure of MS8104
Descriptor: 3C-like proteinase
Authors:Wang, H, Kim, Y, Muramatsu, T, Takemoto, C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2016-05-31
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:SARS-CoV 3CL protease cleaves its C-terminal autoprocessing site by novel subsite cooperativity
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2PBP
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BU of 2pbp by Molmil
Crystal structure of ENOYL-CoA hydrates subunit I (gk_2039) from geobacillus kaustophilus HTA426
Descriptor: Enoyl-CoA hydratase subunit I
Authors:Jeyakanthan, J, Kanaujia, S.P, Vasuki, R.C, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ENOYL-CoA hydrates subunit I (gk_2039) from geobacillus kaustophilus HTA426
To be Published
1UFZ
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BU of 1ufz by Molmil
Solution structure of HBS1-like domain in hypothetical protein BAB28515
Descriptor: Hypothetical protein BAB28515
Authors:He, F, Muto, Y, Hayami, N, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Kobayashi, N, Tanaka, A, Osanai, T, Matsuo, Y, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-11
Release date:2004-08-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of HBS1-like domain in hypothetical protein BAB28515
To be Published

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