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PDB: 2433 results

2ZUF
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Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA(Arg)
Descriptor: Arginyl-tRNA synthetase, tRNA-Arg
Authors:Konno, M, Sumida, T, Uchikawa, E, Mori, Y, Yanagisawa, T, Sekine, S, Yokoyama, S.
Deposit date:2008-10-16
Release date:2009-08-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modeling of tRNA-assisted mechanism of Arg activation based on a structure of Arg-tRNA synthetase, tRNA, and an ATP analog (ANP)
Febs J., 276, 2009
2ZQQ
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BU of 2zqq by Molmil
Crystal structure of human AUH (3-methylglutaconyl-coa hydratase) mixed with (AUUU)24A RNA
Descriptor: Methylglutaconyl-CoA hydratase
Authors:Kurimoto, K, Kuwasako, K, Muto, Y, Nureki, O, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-08-16
Release date:2009-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:AU-rich RNA-binding induces changes in the quaternary structure of AUH
Proteins, 75, 2009
2ZDX
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Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4
Descriptor: 4-[4-(4-methoxyphenyl)-5-methyl-1H-pyrazol-3-yl]benzene-1,3-diol, Pyruvate dehydrogenase kinase isozyme 4
Authors:Kawamoto, M, Shiromizu, I, Kukimoto-niino, M, Tokmakov, A, Terada, T, Shirouzu, M, Matsusue, T, Yokoyama, S.
Deposit date:2007-11-30
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4.
Acta Crystallogr.,Sect.D, 67, 2011
1X6E
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Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
Descriptor: ZINC ION, Zinc finger protein 24
Authors:Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
2Z95
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Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
Descriptor: GDP-D-mannose dehydratase, GUANOSINE-5'-DIPHOSPHATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-09-18
Release date:2008-03-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
To be Published
2YRN
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Solution structure of the CH domain from Human Neuron navigator 2
Descriptor: Neuron navigator 2 isoform 4
Authors:Tomizawa, T, Tochio, N, Koshiba, S, Inoue, M, Nakamura, Y, Furukawa, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-02-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the CH domain from Human Neuron navigator 2
To be Published
2YUY
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BU of 2yuy by Molmil
Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
Descriptor: Rho GTPase activating protein 21
Authors:Niraula, T.N, Yoneyama, M, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of PDZ domain of Rho GTPase Activating Protein 21
To be Published
2YWD
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Crystal structure of glutamine amidotransferase
Descriptor: Glutamine amidotransferase subunit pdxT
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of glutamine amidotransferase
To be Published
2YWJ
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Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
Descriptor: Glutamine amidotransferase subunit pdxT
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
to be published
2YWO
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Crystal structure of reduced thioredoxin-like protein from Thermus thermophilus HB8
Descriptor: Probable thiol-disulfide isomerase/thioredoxin
Authors:Ebihara, A, Manzoku, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of reduced thioredoxin-like protein from Thermus thermophilus HB8
To be Published
2YRK
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BU of 2yrk by Molmil
Solution structure of the zf-C2H2 domain in zinc finger homeodomain 4
Descriptor: ZINC ION, Zinc finger homeobox protein 4
Authors:Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zf-C2H2 domain in zinc finger homeodomain 4
To be Published
2YYN
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Crystal structure of human bromodomain protein
Descriptor: Transcription intermediary factor 1-alpha
Authors:Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-30
Release date:2008-05-06
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human bromodomain protein
To be Published
2YS0
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Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member
Descriptor: Ectonucleotide pyrophosphatase/phosphodiesterase family member 1
Authors:Abe, H, Sasagawa, A, Tochio, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the Somatomedin B domain of human Ectonucleotide pyrophosphatase/phosphodiesterase family member
To be Published
2YZN
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BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
Descriptor: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published
2YWL
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BU of 2ywl by Molmil
Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase related protein
Authors:Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of thioredoxin reductase-related protein TTHA0370 from Thermus thermophilus HB8
To be Published
2Z1B
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BU of 2z1b by Molmil
Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculs
Descriptor: Delta-aminolevulinic acid dehydratase
Authors:Xie, Y, Wang, H, Kawazoe, M, Kishishita, S, Murayama, K, Takemoto, C, Terada, T, Shirozu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculs
To be Published
2Z32
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BU of 2z32 by Molmil
Crystal structure of Keap1 complexed with Prothymosin alpha
Descriptor: Kelch-like ECH-associated protein 1, Prothymosin alpha, SULFATE ION
Authors:Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-31
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of the complex of Keap1 with a prothymosin alpha peptide
Acta Crystallogr.,Sect.F, 64, 2008
1YOA
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BU of 1yoa by Molmil
Crystal structure of a probable flavoprotein from Thermus thermophilus HB8
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, putative flavoprotein
Authors:Imagawa, T, Tsuge, H, Sugimoto, Y, Utsunomiya, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-01-27
Release date:2005-07-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a flavoenzyme TTHA0420 from Thermus thermophilus HB8
To be published
2YRT
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BU of 2yrt by Molmil
Solution structure of the CHORD domain of human CHORD-containing protein 1
Descriptor: CHORD containing protein-1, ZINC ION
Authors:Nameki, N, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the CHORD domain of human CHORD-containing protein 1
To be Published
2YTS
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Solution structure of the C2H2 type zinc finger (region 715-747) of human Zinc finger protein 484
Descriptor: ZINC ION, Zinc finger protein 484
Authors:Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2 type zinc finger (region 715-747) of human Zinc finger protein 484
To be Published
2YU7
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BU of 2yu7 by Molmil
Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
Descriptor: Tyrosine-protein phosphatase non-receptor type 6, natural killer group 2A
Authors:Kasai, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2008-04-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the SHP-1 C-terminal SH2 domain complexed with a tyrosine-phosphorylated peptide from NKG2A
To be Published
2YUP
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Solution structure of the second SH3 domain of human Vinexin
Descriptor: Vinexin
Authors:Abe, H, Tochio, N, Miyamoto, K, Saito, K, Sasagawa, A, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second SH3 domain of human Vinexin
To be Published
2YV2
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Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1
Descriptor: Succinyl-CoA synthetase alpha chain
Authors:Niwa, H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Aeropyrum pernix K1
To be Published
2YQR
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Solution structure of the KH domain in KIAA0907 protein
Descriptor: KIAA0907 protein
Authors:Kadirvel, S, He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the KH domain in KIAA0907 protein
To be Published
2YTO
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Solution structure of the C2H2 type zinc finger (region 659-691) of human Zinc finger protein 484
Descriptor: ZINC ION, Zinc finger protein 484
Authors:Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2 type zinc finger (region 659-691) of human Zinc finger protein 484
To be Published

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