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PDB: 20 results

1XK4
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Crystal structure of human calprotectin(S100A8/S100A9)
Descriptor: CALCIUM ION, CHLORIDE ION, CITRATE ANION, ...
Authors:Korndoerfer, I.P, Brueckner, F, Skerra, A.
Deposit date:2004-09-26
Release date:2005-10-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the human (S100A8/S100A9)2 heterotetramer, calprotectin, illustrates how conformational changes of interacting alpha-helices can determine specific association of two EF-hand proteins
J.Mol.Biol., 370, 2007
1XOV
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The crystal structure of the listeria monocytogenes bacteriophage PSA endolysin PlyPSA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLUTAMIC ACID, ...
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2004-10-07
Release date:2005-10-18
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the bacteriophage PSA endolysin reveals a unique fold responsible for specific recognition of Listeria cell walls
J.Mol.Biol., 364, 2006
1D9W
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BACTERIOPHAGE T4 LYSOZYME MUTANT
Descriptor: BETA-MERCAPTOETHANOL, PROTEIN (LYSOZYME)
Authors:Korndoerfer, I.P, Matthews, B.W.
Deposit date:1999-10-30
Release date:1999-11-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Helix Capping in Bacteriophage T4 Lysozyme
To be Published
2VO9
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CRYSTAL STRUCTURE OF THE ENZYMATICALLY ACTIVE DOMAIN OF THE LISTERIA MONOCYTOGENES BACTERIOPHAGE 500 ENDOLYSIN PLY500
Descriptor: L-ALANYL-D-GLUTAMATE PEPTIDASE, SULFATE ION, ZINC ION
Authors:Korndoerfer, I.P, Kanitz, A, Skerra, A.
Deposit date:2008-02-09
Release date:2008-02-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis of the L-Alanoyl-D-Glutamate Endopeptidase Domain of Listeria Bacteriophage Endolysin Ply500 Reveals a New Member of the Las Peptidase Family.
Acta Crystallogr.,Sect.D, 64, 2008
1N0S
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BU of 1n0s by Molmil
ENGINEERED LIPOCALIN FLUA IN COMPLEX WITH FLUORESCEIN
Descriptor: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, Bilin-binding protein, SULFATE ION
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2002-10-15
Release date:2003-08-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic analysis of an "anticalin" with tailored specificity for fluorescein reveals high structural plasticity of the lipocalin loop region.
Proteins, 53, 2003
1KXO
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ENGINEERED LIPOCALIN DIGA16 : APO-FORM
Descriptor: DigA16
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2002-02-01
Release date:2003-06-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural mechanism of specific ligand recognition by a lipocalin tailored for the complexation of digoxigenin.
J.Mol.Biol., 330, 2003
1LKE
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ENGINEERED LIPOCALIN DIGA16 IN COMPLEX WITH DIGOXIGENIN
Descriptor: DIGOXIGENIN, DigA16
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2002-04-25
Release date:2003-06-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural mechanism of specific ligand recognition by a lipocalin tailored for the complexation of digoxigenin.
J.Mol.Biol., 330, 2003
1LNM
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ANTICALIN DIGA16 IN COMPLEX WITH DIGITOXIGENIN
Descriptor: DIGITOXIGENIN, DigA16
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2002-05-03
Release date:2003-06-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural mechanism of specific ligand recognition by a lipocalin tailored for the complexation of digoxigenin.
J.Mol.Biol., 330, 2003
3INW
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BU of 3inw by Molmil
HSP90 N-TERMINAL DOMAIN with pochoxime A
Descriptor: (5E,9E,11E)-13-chloro-14,16-dihydroxy-3,4,7,8-tetrahydro-1H-2-benzoxacyclotetradecine-1,11(12H)-dione 11-[O-(2-oxo-2-piperidin-1-ylethyl)oxime], DIMETHYL SULFOXIDE, Heat shock protein HSP 90-alpha
Authors:Korndoerfer, I.P.
Deposit date:2009-08-13
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Inhibition of HSP90 with pochoximes: SAR and structure-based insights.
Chembiochem, 10, 2009
3INX
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HSP90 N-TERMINAL DOMAIN with pochoxime B
Descriptor: (5E,9E,11E)-14,16-dihydroxy-3,4,7,8-tetrahydro-1H-2-benzoxacyclotetradecine-1,11(12H)-dione 11-[O-(2-oxo-2-piperidin-1-ylethyl)oxime], DIMETHYL SULFOXIDE, Heat shock protein HSP 90-alpha
Authors:Korndoerfer, I.P.
Deposit date:2009-08-13
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Inhibition of HSP90 with pochoximes: SAR and structure-based insights.
Chembiochem, 10, 2009
1HDG
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THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION
Descriptor: HOLO-D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Korndoerfer, I, Steipe, B, Huber, R, Tomschy, A, Jaenicke, R.
Deposit date:1995-01-17
Release date:1995-03-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution.
J.Mol.Biol., 246, 1995
1KL3
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an engineered streptavidin with improved affinity for the strep-tag II peptide : SAm1-StrepII
Descriptor: strep-tag II peptide, streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-12-11
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
1KL5
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an engineered streptavidin with improved affinity for the strep-tag II peptide : SAm2-StrepII
Descriptor: strep-tag II, streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-12-11
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
1KFF
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BU of 1kff by Molmil
An engineered streptavidin with improved affinity for the strep-tag II peptide: apo-SAM1
Descriptor: streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-11-20
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
1KL4
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AN ENGINEERED STREPTAVIDIN WITH IMPROVED AFFINITY FOR THE STREP-TAG II PEPTIDE : apo-SAM2
Descriptor: streptavidin
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2001-12-11
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Improved affinity of engineered streptavidin for the Strep-tag II peptide is due to a fixed open conformation of the lid-like loop at the binding site.
Protein Sci., 11, 2002
1XKI
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BU of 1xki by Molmil
Crystal structure of human tear lipocalin/von Ebners gland protein
Descriptor: CHLORIDE ION, Von Ebner's gland protein, ZINC ION
Authors:Breustedt, D.A, Korndoerfer, I.P, Redl, B, Skerra, A.
Deposit date:2004-09-29
Release date:2004-10-19
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.8-A crystal structure of human tear lipocalin reveals an extended branched cavity with capacity for multiple ligands
J.Biol.Chem., 280, 2005
1A5Z
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BU of 1a5z by Molmil
LACTATE DEHYDROGENASE FROM THERMOTOGA MARITIMA (TMLDH)
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, CADMIUM ION, L-LACTATE DEHYDROGENASE, ...
Authors:Auerbach, G, Ostendorp, R, Prade, L, Korndoerfer, I, Dams, T, Huber, R, Jaenicke, R.
Deposit date:1998-02-18
Release date:1999-03-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Lactate dehydrogenase from the hyperthermophilic bacterium thermotoga maritima: the crystal structure at 2.1 A resolution reveals strategies for intrinsic protein stabilization.
Structure, 6, 1998
5K1I
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PDE4 crystal structure in complex with small molecule inhibitor
Descriptor: 4-[(5-acetyl-2-ethyl-3-oxo-6-phenyl-2,3-dihydropyridazin-4-yl)amino]benzoic acid, MAGNESIUM ION, ZINC ION, ...
Authors:Segarra, V, Hernandez, B, Ferrer-Miralles, N, Korndoerfer, I, Aymami, J.
Deposit date:2016-05-18
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Biphenyl Pyridazinone Derivatives as Inhaled PDE4 Inhibitors: Structural Biology and Structure-Activity Relationships.
J. Med. Chem., 59, 2016
5LGE
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Crystal Structure of human IDH1 mutant (R132H) in complex with NADP+ and an Inhibitor related to BAY 1436032
Descriptor: 1,2-ETHANEDIOL, 2-[(4-propan-2-ylphenyl)amino]-1-[(1~{S},5~{S})-3,3,5-trimethylcyclohexyl]benzimidazole-5-carboxylic acid, ACETATE ION, ...
Authors:Hillig, R.C, Hars, U, Korndoerfer, I.P.
Deposit date:2016-07-07
Release date:2017-02-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Pan-mutant IDH1 inhibitor BAY 1436032 for effective treatment of IDH1 mutant astrocytoma in vivo.
Acta Neuropathol., 133, 2017
1DHP
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DIHYDRODIPICOLINATE SYNTHASE
Descriptor: DIHYDRODIPICOLINATE SYNTHASE, POTASSIUM ION
Authors:Mirwaldt, C, Korndoerfer, I, Huber, R.
Deposit date:1995-02-09
Release date:1997-02-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of dihydrodipicolinate synthase from Escherichia coli at 2.5 A resolution.
J.Mol.Biol., 246, 1995

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