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PDB: 13 件

5X5X
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BU of 5x5x by Molmil
Crystal structure of the Fab fragment of anti-osteocalcin C-terminal peptide antibody KTM219
分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, Fd chain of anti-osteocalcin antibody KTM219, ...
著者Komatsu, M, Dong, J, Ueda, H, Arai, R.
登録日2017-02-18
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the Fab fragment of anti-osteocalcin C-terminal peptide antibody KTM219
To be published
4ZY3
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Crystal Structure of Keap1 in Complex with a small chemical compound, K67
分子名称: FORMIC ACID, Kelch-like ECH-associated protein 1, N,N'-[2-(2-oxopropyl)naphthalene-1,4-diyl]bis(4-ethoxybenzenesulfonamide)
著者Fukutomi, T, Iso, T, Suzuki, T, Takagi, K, Mizushima, T, Komatsu, M, Yamamoto, M.
登録日2015-05-21
公開日2016-05-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
Nat Commun, 7, 2016
2RRU
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Solution structure of the UBA omain of p62 and its interaction with ubiquitin
分子名称: Sequestosome-1
著者Isogai, S, Morimoto, D, Arita, K, Unzai, S, Tenno, T, Hasegawa, J, Sou, Y, Komatsu, M, Tanaka, K, Shirakawa, M, Tochio, H.
登録日2011-06-09
公開日2011-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Crystal structure of the UBA omain of p62 and its interaction with ubiquitin
To be Published
1WXS
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Solution Structure of Ufm1, a ubiquitin-fold modifier
分子名称: Ubiquitin-fold Modifier 1
著者Sasakawa, H, Sakata, E, Yamaguchi, Y, Komatsu, M, Tatsumi, K, Kominami, E, Tanaka, K, Kato, K.
登録日2005-02-01
公開日2006-04-18
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of Ufm1, a ubiquitin-fold modifier 1
Biochem.Biophys.Res.Commun., 343, 2006
3WDZ
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BU of 3wdz by Molmil
Crystal Structure of Keap1 in Complex with phosphorylated p62
分子名称: Kelch-like ECH-associated protein 1, Peptide from Sequestosome-1
著者Fukutomi, T, Takagi, K, Mizushima, T, Tanaka, K, Komatsu, M, Yamamoto, M.
登録日2013-06-26
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Phosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy.
Mol.Cell, 51, 2013
3WIM
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GABARAP-LIR peptide complex
分子名称: Gamma-aminobutyric acid receptor-associated protein, WD repeat and FYVE domain-containing protein 3
著者Lystad, A, Ichimura, Y, Takagi, K, Yang, Y, Pankiv, S, Mizushima, T, Komatsu, M, Simonsen, A.
登録日2013-09-19
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献GABARAP-LIR peptide complex
To be Published, 2014
2D1I
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BU of 2d1i by Molmil
Structure of human Atg4b
分子名称: Cysteine protease APG4B
著者Kumanomidou, T, Mizushima, T, Komatsu, M, Suzuki, A, Tanida, I, Sou, Y.S, Ueno, T, Kominami, E, Tanaka, K, Yamane, T.
登録日2005-08-24
公開日2006-01-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Crystal Structure of Human Atg4b, a Processing and De-conjugating Enzyme for Autophagosome-forming Modifiers
J.Mol.Biol., 355, 2006
3B0F
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Crystal structure of the UBA domain of p62 and its interaction with ubiquitin
分子名称: SULFATE ION, Sequestosome-1
著者Isogai, S, Morimoto, D, Arita, K, Unzai, S, Tenno, T, Hasegawa, J, Sou, Y, Komatsu, M, Tanaka, K, Shirakawa, M, Tochio, H.
登録日2011-06-09
公開日2011-06-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the ubiquitin-associated (UBA) domain of p62 and its interaction with ubiquitin.
J.Biol.Chem., 286, 2011
2Z6P
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Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1
分子名称: Ufm1-conjugating enzyme 1
著者Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T.
登録日2007-08-06
公開日2007-09-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
2Z6O
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BU of 2z6o by Molmil
Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1
分子名称: MAGNESIUM ION, Ufm1-conjugating enzyme 1
著者Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T.
登録日2007-08-06
公開日2007-09-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
2ZJD
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BU of 2zjd by Molmil
Crystal Structure of LC3-p62 complex
分子名称: Microtubule-associated proteins 1A/1B light chain 3B precursor, undecameric peptide from Sequestosome-1
著者Ichimura, Y, Kumanomidou, T, Sou, Y, Mizushima, T, Ezaki, J, Ueno, T, Kominami, E, Yamane, T, Tanaka, K, Komatsu, M.
登録日2008-03-05
公開日2008-06-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural Basis for Sorting Mechanism of p62 in Selective Autophagy
J.Biol.Chem., 283, 2008
2MJ5
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BU of 2mj5 by Molmil
Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin
分子名称: Next to BRCA1 gene 1 protein, Polyubiquitin-C
著者Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M.
登録日2013-12-25
公開日2014-04-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.
J.Biol.Chem., 289, 2014
2MGW
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Solution Structure of the UBA Domain of Human NBR1
分子名称: Next to BRCA1 gene 1 protein
著者Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M.
登録日2013-11-09
公開日2014-04-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.
J.Biol.Chem., 289, 2014

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件を2024-05-15に公開中

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