2CTQ
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![BU of 2ctq by Molmil](/molmil-images/mine/2ctq) | Solution structure of J-domain from human DnaJ subfamily C menber 12 | Descriptor: | DnaJ homolog subfamily C member 12 | Authors: | Kobayashi, N, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-05-24 | Release date: | 2005-11-24 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of J-domain from human DnaJ subfamily C menber 12 To be Published
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2DN9
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![BU of 2dn9 by Molmil](/molmil-images/mine/2dn9) | Solution structure of J-domain from the DnaJ homolog, human Tid1 protein | Descriptor: | DnaJ homolog subfamily A member 3 | Authors: | Kobayashi, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2006-04-25 | Release date: | 2006-10-25 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of J-domain from the DnaJ homolog, human Tid1 protein To be Published
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2CTW
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![BU of 2ctw by Molmil](/molmil-images/mine/2ctw) | Solution structure of J-domain from mouse DnaJ subfamily C menber 5 | Descriptor: | DnaJ homolog subfamily C member 5 | Authors: | Kobayashi, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-05-21 | Release date: | 2005-11-24 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of J-domain from mouse DnaJ subfamily C menber 5 To be Published
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2CTR
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![BU of 2ctr by Molmil](/molmil-images/mine/2ctr) | Solution structure of J-domain from human DnaJ subfamily B menber 9 | Descriptor: | DnaJ homolog subfamily B member 9 | Authors: | Kobayashi, N, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-05-24 | Release date: | 2005-11-24 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of J-domain from human DnaJ subfamily B menber 9 To be Published
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2CTP
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![BU of 2ctp by Molmil](/molmil-images/mine/2ctp) | Solution structure of J-domain from human DnaJ subfamily B menber 12 | Descriptor: | DnaJ homolog subfamily B member 12 | Authors: | Kobayashi, N, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-05-24 | Release date: | 2005-11-24 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of J-domain from human DnaJ subfamily B menber 12 To be Published
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2CTU
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![BU of 2ctu by Molmil](/molmil-images/mine/2ctu) | Solution structure of zinc finger domain from human Zn finger protein 483 | Descriptor: | ZINC ION, Zinc finger protein 483 | Authors: | Kobayashi, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-05-24 | Release date: | 2005-11-24 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of zinc finger domain from human Zn finger protein 483 To be Published
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1WFS
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![BU of 1wfs by Molmil](/molmil-images/mine/1wfs) | Solution Structure of Glia Maturation Factor-gamma from Mus Musculus | Descriptor: | Glia maturation factor gamma | Authors: | Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-26 | Release date: | 2004-11-26 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | NMR solution structures of actin depolymerizing factor homology domains. Protein Sci., 18, 2009
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7DNS
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![BU of 7dns by Molmil](/molmil-images/mine/7dns) | Crystal structure of domain-swapped dimer of H5_Fold-0 Elsa; de novo designed protein with an asymmetric all-alpha topology | Descriptor: | GLYCEROL, de novo designed protein | Authors: | Suzuki, K, Kobayashi, N, Murata, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N. | Deposit date: | 2020-12-10 | Release date: | 2021-07-28 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.327 Å) | Cite: | Design of complicated all-alpha protein structures Nat.Struct.Mol.Biol., 2024
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1N27
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![BU of 1n27 by Molmil](/molmil-images/mine/1n27) | Solution structure of the PWWP domain of mouse Hepatoma-derived growth factor, related protein 3 | Descriptor: | Hepatoma-derived growth factor, related protein 3 | Authors: | Nameki, N, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2002-10-22 | Release date: | 2003-12-23 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the PWWP domain of the hepatoma-derived growth factor family. Protein Sci., 14, 2005
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3VJF
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![BU of 3vjf by Molmil](/molmil-images/mine/3vjf) | Crystal structure of de novo 4-helix bundle protein WA20 | Descriptor: | POTASSIUM ION, WA20 | Authors: | Arai, R, Kimura, A, Kobayashi, N, Matsuo, K, Sato, T, Wang, A.F, Platt, J.M, Bradley, L.H, Hecht, M.H. | Deposit date: | 2011-10-18 | Release date: | 2012-03-28 | Last modified: | 2017-11-22 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Domain-swapped dimeric structure of a stable and functional de novo four-helix bundle protein, WA20 J.Phys.Chem.B, 116, 2012
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2RUH
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![BU of 2ruh by Molmil](/molmil-images/mine/2ruh) | Chemical Shift Assignments for MIP and MDM2 in bound state | Descriptor: | E3 ubiquitin-protein ligase Mdm2 | Authors: | Nagata, T, Shirakawa, K, Kobayashi, N, Shiheido, H, Horisawa, K, Katahira, M, Doi, N, Yanagawa, H. | Deposit date: | 2014-06-03 | Release date: | 2014-10-15 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Structural Basis for Inhibition of the MDM2:p53 Interaction by an Optimized MDM2-Binding Peptide Selected with mRNA Display Plos One, 9, 2014
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2RQ4
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![BU of 2rq4 by Molmil](/molmil-images/mine/2rq4) | Refinement of RNA binding domain 3 in CUG triplet repeat RNA-binding protein 1 | Descriptor: | CUG-BP- and ETR-3-like factor 1 | Authors: | Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Terada, T, Kobayashi, N, Shirouzu, M, Kigawa, T, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2009-01-19 | Release date: | 2009-08-04 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3 Nucleic Acids Res., 2009
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6LR2
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![BU of 6lr2 by Molmil](/molmil-images/mine/6lr2) | |
2RNE
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![BU of 2rne by Molmil](/molmil-images/mine/2rne) | Solution structure of the second RNA recognition motif (RRM) of TIA-1 | Descriptor: | Tia1 protein | Authors: | Takahashi, M, Kuwasako, K, Abe, C, Tsuda, K, Inoue, M, Terada, T, Shirouzu, M, Kobayashi, N, Kigawa, T, Taguchi, S, Guntert, P, Hayashizaki, Y, Tanaka, A, Muto, Y, Yokoyama, S. | Deposit date: | 2007-12-19 | Release date: | 2008-11-04 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode Biochemistry, 47, 2008
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2RUJ
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![BU of 2ruj by Molmil](/molmil-images/mine/2ruj) | Solution structure of MTSL spin-labeled Schizosaccharomyces pombe Sin1 CRIM domain | Descriptor: | Stress-activated map kinase-interacting protein 1 | Authors: | Furuita, K, Kataoka, S, Sugiki, T, Kobayashi, N, Ikegami, T, Shiozaki, K, Fujiwara, T, Kojima, C. | Deposit date: | 2014-07-24 | Release date: | 2015-07-29 | Method: | SOLUTION NMR | Cite: | Utilization of paramagnetic relaxation enhancements for high-resolution NMR structure determination of a soluble loop-rich protein with sparse NOE distance restraints J.Biomol.Nmr, 61, 2015
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8KCQ
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![BU of 8kcq by Molmil](/molmil-images/mine/8kcq) | Solution structures of the N-terminal divergent caplonin homology (NN-CH) domains of human intraflagellar transport protein 54 | Descriptor: | TRAF3-interacting protein 1 | Authors: | Dang, W, Kuwasako, K, He, F, Takahashi, M, Tsuda, K, Nagata, T, Tanaka, A, Kobayashi, N, Kigawa, T, Guentert, P, Shirouzu, M, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2023-08-08 | Release date: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | 1 H, 13 C, and 15 N resonance assignments and solution structure of the N-terminal divergent calponin homology (NN-CH) domain of human intraflagellar transport protein 54. Biomol.Nmr Assign., 18, 2024
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2KBO
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![BU of 2kbo by Molmil](/molmil-images/mine/2kbo) | Structure, interaction, and real-time monitoring of the enzymatic reaction of wild type APOBEC3G | Descriptor: | DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION | Authors: | Furukawa, A, Nagata, T, Matsugami, A, Habu, Y, Sugiyama, R, Hayashi, F, Kobayashi, N, Yokoyama, S, Takaku, H, Katahira, M. | Deposit date: | 2008-12-04 | Release date: | 2009-02-03 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Structure, interaction and real-time monitoring of the enzymatic reaction of wild-type APOBEC3G Embo J., 28, 2009
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5GVQ
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![BU of 5gvq by Molmil](/molmil-images/mine/5gvq) | Solution structure of the first RRM domain of human spliceosomal protein SF3b49 | Descriptor: | Splicing factor 3B subunit 4 | Authors: | Kuwasako, K, Nameki, N, Tsuda, K, Takahashi, M, Sato, A, Tochio, N, Inoue, M, Terada, T, Kigawa, T, Kobayashi, N, Shirouzu, M, Ito, T, Sakamoto, T, Wakamatsu, K, Guntert, P, Takahashi, S, Yokoyama, S, Muto, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2016-09-06 | Release date: | 2017-04-12 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structure of the first RNA recognition motif domain of human spliceosomal protein SF3b49 and its mode of interaction with a SF3b145 fragment. Protein Sci., 26, 2017
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2ND5
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![BU of 2nd5 by Molmil](/molmil-images/mine/2nd5) | Lysine dimethylated FKBP12 | Descriptor: | Peptidyl-prolyl cis-trans isomerase FKBP1A | Authors: | Hattori, Y, Sebera, J, Sychrovsky, V, Furuita, K, Sugiki, T, Ohki, I, Ikegami, T, Kobayashi, N, Tanaka, Y, Fujiwara, T, Kojima, C. | Deposit date: | 2016-05-05 | Release date: | 2017-05-17 | Method: | SOLUTION NMR | Cite: | NMR Observation of Protein Surface Salt Bridges at Neutral pH To be Published
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8KAD
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![BU of 8kad by Molmil](/molmil-images/mine/8kad) | Crystal structure of an antibody light chain tetramer with 3D domain swapping | Descriptor: | Antibody light chain | Authors: | Sakai, T, Mashima, T, Kobayashi, N, Ogata, H, Uda, T, Hifumi, E, Hirota, S. | Deposit date: | 2023-08-02 | Release date: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural and thermodynamic insights into antibody light chain tetramer formation through 3D domain swapping. Nat Commun, 14, 2023
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7FBR
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![BU of 7fbr by Molmil](/molmil-images/mine/7fbr) | |
2PP4
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![BU of 2pp4 by Molmil](/molmil-images/mine/2pp4) | Solution Structure of ETO-TAFH refined in explicit solvent | Descriptor: | Protein ETO | Authors: | Wei, Y, Liu, S, Lausen, J, Woodrell, C, Cho, S, Biris, N, Kobayashi, N, Yokoyama, S, Werner, M.H. | Deposit date: | 2007-04-27 | Release date: | 2007-06-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | A TAF4-homology domain from the corepressor ETO is a docking platform for positive and negative regulators of transcription Nat.Struct.Mol.Biol., 14, 2007
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7FBV
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![BU of 7fbv by Molmil](/molmil-images/mine/7fbv) | |
2MGZ
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![BU of 2mgz by Molmil](/molmil-images/mine/2mgz) | Solution structure of RBFOX family ASD-1 RRM and SUP-12 RRM in ternary complex with RNA | Descriptor: | Protein ASD-1, isoform a, Protein SUP-12, ... | Authors: | Takahashi, M, Kuwasako, K, Unzai, S, Tsuda, K, Yoshikawa, S, He, F, Kobayashi, N, Guntert, P, Shirouzu, M, Ito, T, Tanaka, A, Yokoyama, S, Hagiwara, M, Kuroyanagi, H, Muto, Y. | Deposit date: | 2013-11-12 | Release date: | 2014-08-13 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | RBFOX and SUP-12 sandwich a G base to cooperatively regulate tissue-specific splicing Nat.Struct.Mol.Biol., 21, 2014
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7BV9
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![BU of 7bv9 by Molmil](/molmil-images/mine/7bv9) | The NMR structure of the BEN domain from human NAC1 | Descriptor: | Nucleus accumbens-associated protein 1 | Authors: | Nagata, T, Kobayashi, N, Nakayama, N, Obayashi, E, Urano, T. | Deposit date: | 2020-04-09 | Release date: | 2021-02-17 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Nucleus Accumbens-Associated Protein 1 Binds DNA Directly through the BEN Domain in a Sequence-Specific Manner. Biomedicines, 8, 2020
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