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PDB: 31 results

5GIM
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Crystal structure of thrombin-avathrin complex
Descriptor: C-terminal peptide from Putative uncharacterized protein avahiru, N-terminal peptide from Putative uncharacterized protein avahiru, Thrombin light chain, ...
Authors:Kini, R.M, Koh, C.Y, Iyer, J.K, Swaminathan, K.
Deposit date:2016-06-24
Release date:2017-05-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Avathrin: a novel thrombin inhibitor derived from a multicopy precursor in the salivary glands of the ixodid tick, Amblyomma variegatum.
FASEB J., 31, 2017
2IGU
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Deamidated analogue of ImI Conotoxin
Descriptor: Alpha-conotoxin ImI
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-25
Release date:2007-08-14
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
2IH6
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Pro6 variant of CMrVIA conotoxin
Descriptor: Lambda-conotoxin CMrVIA
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-26
Release date:2007-08-14
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
2IHA
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Amidated variant of CMrVIA conotoxin
Descriptor: Lambda-conotoxin CMrVIA
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-26
Release date:2007-08-14
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
2IFZ
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Lys6 Variant of ImI Conotoxin
Descriptor: Alpha-conotoxin ImI
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-22
Release date:2007-08-14
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
2IFI
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Ala6 Variant of ImI Conotoxin
Descriptor: Alpha-conotoxin ImI
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-21
Release date:2007-08-14
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
2IH7
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Amidated Pro6 Analogue of CMrVIA conotoxin
Descriptor: Lambda-conotoxin CMrVIA
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-26
Release date:2007-08-14
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
2IFJ
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Lys6 deamidated variant of ImI conotoxin
Descriptor: Alpha-conotoxin ImI
Authors:Kini, R.M, Kang, T.S.
Deposit date:2006-09-21
Release date:2007-08-14
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins
Biochemistry, 46, 2007
1HP9
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BU of 1hp9 by Molmil
kappa-Hefutoxins: a novel Class of Potassium Channel Toxins from Scorpion venom
Descriptor: kappa-hefutoxin 1
Authors:Srinivasan, K.N, Sivaraja, V, Huys, I, Sasaki, T, Cheng, B, Kumar, T.K.S, Sato, K, Tytgat, J, Yu, C, Brian Chia, C.S, Ranganathan, S, Bowie, J.H, Kini, R.M, Gopalakrishnakone, P.
Deposit date:2000-12-12
Release date:2002-08-28
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:kappa-Hefutoxin1, a novel toxin from the scorpion Heterometrus fulvipes with unique structure and function. Importance of the functional diad in potassium channel selectivity.
J.Biol.Chem., 277, 2002
2B5Q
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Solution structure of globular conformation of CMrVIA lambda conotoxin
Descriptor: Lambda-conotoxin CMrVIA
Authors:Kang, T.S, Jois, S.D.S, Kini, R.M.
Deposit date:2005-09-29
Release date:2006-08-29
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution Structures of Two Structural Isoforms of CMrVIA chi/lambda-Conotoxin
Biomacromolecules, 7, 2006
3B23
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Crystal structure of thrombin-variegin complex: Insights of a novel mechanism of inhibition and design of tunable thrombin inhibitors
Descriptor: Thrombin heavy chain, Thrombin light chain, Variegin
Authors:Koh, C.Y, Kumar, S, Swaminathan, K, Kini, R.M.
Deposit date:2011-07-20
Release date:2011-11-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of thrombin in complex with s-variegin: insights of a novel mechanism of inhibition and design of tunable thrombin inhibitors
Plos One, 6, 2011
7C28
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Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom
Descriptor: SULFATE ION, Synergistic-type venom protein S2C4
Authors:Jobichen, C, Narumi, A, Sivaraman, J, Kini, R.M.
Deposit date:2020-05-07
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unusual quaternary structure of a homodimeric synergistic-type toxin from mamba snake venom defines its molecular evolution.
Biochem.J., 477, 2020
2B5P
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BU of 2b5p by Molmil
Solution structure of ribbon isoform of CMrVIA lambda conotoxin
Descriptor: Lambda-conotoxin CMrVIA
Authors:Kang, T.S, Jois, S.D.S, Kini, R.M.
Deposit date:2005-09-29
Release date:2006-08-29
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution Structures of Two Structural Isoforms of CMrVIA chi/lambda-Conotoxin
Biomacromolecules, 7, 2006
5GWB
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BU of 5gwb by Molmil
Hen Egg White Lysozyme native crystals soaked for 2 hours in precipitant solution containing 1 M guanidine hydrochloride and 25% glycerol, before data collection
Descriptor: CHLORIDE ION, GUANIDINE, Lysozyme C
Authors:Hosur, M.V, Kini, R.M, Yeow, C.
Deposit date:2016-09-10
Release date:2017-09-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Hen Egg White Lysozyme native crystals soaked for 2 hours in precipitant solution containing 1 M guanidine hydrochloride and 25% glycerol, before data collection
To Be Published
3HH7
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BU of 3hh7 by Molmil
Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
Descriptor: Muscarinic toxin-like protein 3 homolog
Authors:Roy, A, Zhou, X, Chong, M.Z, D'hoedt, D, Foo, C.S, Rajagopalan, N, Nirthanan, S, Bertrand, D, Sivaraman, J, Kini, R.M.
Deposit date:2009-05-15
Release date:2010-01-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
J.Biol.Chem., 285, 2010
1IJC
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BU of 1ijc by Molmil
Solution Structure of Bucandin, a Neurotoxin from the Venom of the Malayan Krait
Descriptor: bucandin
Authors:Torres, A.M, Kini, R.M, Nirthanan, S, Kuchel, P.W.
Deposit date:2001-04-25
Release date:2001-12-21
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:NMR structure of bucandin, a neurotoxin from the venom of the Malayan krait (Bungarus candidus).
Biochem.J., 360, 2001
3PLC
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BU of 3plc by Molmil
Crystal structure of Beta-Cardiotoxin, a novel three-finger cardiotoxin from the venom of Ophiophagus hannah
Descriptor: Beta-cardiotoxin OH-27
Authors:Roy, A, Qingxiang, S, Kini, R.M, Sivaraman, J.
Deposit date:2010-11-15
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Identification of a alpha-helical molten globule intermediate and structural characterization of beta-cardiotoxin, an all beta-sheet protein isolated from the venom of Ophiophagus hannah (king cobra).
Protein Sci., 28, 2019
6A4P
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HEWL crystals soaked in 2.5M GuHCl for 40 minutes
Descriptor: CHLORIDE ION, GUANIDINE, Lysozyme C, ...
Authors:Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
Deposit date:2018-06-20
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
6A4Q
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BU of 6a4q by Molmil
HEWL crystals soaked in 2.5M GuHCl for 110 minutes
Descriptor: CHLORIDE ION, GLYCEROL, GUANIDINE, ...
Authors:Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
Deposit date:2018-06-20
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
6A4O
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BU of 6a4o by Molmil
HEWL crystals soaked in 2.5M GuHCl for 20 minutes
Descriptor: CHLORIDE ION, GLYCEROL, GUANIDINE, ...
Authors:Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
Deposit date:2018-06-20
Release date:2019-03-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
6A4N
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BU of 6a4n by Molmil
HEWL crystals soaked in 2.5M GuHCl for 8 minutes
Descriptor: CHLORIDE ION, GLYCEROL, GUANIDINE, ...
Authors:Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V.
Deposit date:2018-06-20
Release date:2019-03-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding.
Int. J. Biol. Macromol., 122, 2019
1F94
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THE 0.97 RESOLUTION STRUCTURE OF BUCANDIN, A NOVEL TOXIN ISOLATED FROM THE MALAYAN KRAIT
Descriptor: BUCANDIN
Authors:Kuhn, P, Deacon, A.M, Comoso, S, Rajaseger, G, Kini, R.M, Uson, I, Kolatkar, P.R.
Deposit date:2000-07-06
Release date:2000-07-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:The atomic resolution structure of bucandin, a novel toxin isolated from the Malayan krait, determined by direct methods.
Acta Crystallogr.,Sect.D, 56, 2000
2QHD
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BU of 2qhd by Molmil
Crystal structure of ecarpholin S (ser49-PLA2) complexed with fatty acid
Descriptor: LAURIC ACID, Phospholipase A2
Authors:Zhou, X, Tan, T.C, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
2QHE
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BU of 2qhe by Molmil
Crystal structure of Ser49-PLA2 (ecarpholin S) from Echis carinatus sochureki snake venom
Descriptor: Phospholipase A2
Authors:Zhou, X, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
1UDK
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BU of 1udk by Molmil
Solution Structure of Nawaprin
Descriptor: Nawaprin
Authors:Torres, A.M, Wong, H.Y, Desai, M, Moochhala, S, Kuchel, P.W, Kini, R.M.
Deposit date:2003-05-01
Release date:2003-11-04
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Identification of a Novel Family of Proteins in Snake Venoms: Purification and Structural Characterization of Nawaprin from Naja nigricollis Snake Venom
J.BIOL.CHEM., 278, 2003

 

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