Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34 results

8JYP
DownloadVisualize
BU of 8jyp by Molmil
Structure of SARS-CoV-2 XBB.1.5 spike RBD in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
Deposit date:2023-07-03
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
8JYN
DownloadVisualize
BU of 8jyn by Molmil
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (1-up state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
Deposit date:2023-07-03
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
8JYO
DownloadVisualize
BU of 8jyo by Molmil
Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (2-up state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Yajima, H, Anraku, Y, Kita, S, Kimura, K, Sasaki, J, Sasaki-Tabata, K, Maenaka, K, Hashiguchi, T.
Deposit date:2023-07-03
Release date:2024-01-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Virological characteristics of the SARS-CoV-2 XBB.1.5 variant
To Be Published
7CD2
DownloadVisualize
BU of 7cd2 by Molmil
Crystal structure of the S103F mutant of Bacillus subtilis (natto) YabJ protein.
Descriptor: YabJ protein
Authors:Fujimoto, Z, Kishine, N, Kimura, K.
Deposit date:2020-06-18
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Tetramer formation of Bacillus subtilis YabJ protein that belongs to YjgF/YER057c/UK114 family.
Biosci.Biotechnol.Biochem., 85, 2021
7CD3
DownloadVisualize
BU of 7cd3 by Molmil
Crystal structure of the S103F mutant of Bacillus subtilis (natto) YabJ protein.
Descriptor: GLYCEROL, SULFATE ION, YabJ protein
Authors:Fujimoto, Z, Kishine, N, Kimura, K.
Deposit date:2020-06-18
Release date:2021-03-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tetramer formation of Bacillus subtilis YabJ protein that belongs to YjgF/YER057c/UK114 family.
Biosci.Biotechnol.Biochem., 85, 2021
7CD4
DownloadVisualize
BU of 7cd4 by Molmil
Crystal structure of the S103F mutant of Bacillus subtilis (natto) YabJ protein.
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Fujimoto, Z, Kishine, N, Kimura, K.
Deposit date:2020-06-18
Release date:2021-03-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tetramer formation of Bacillus subtilis YabJ protein that belongs to YjgF/YER057c/UK114 family.
Biosci.Biotechnol.Biochem., 85, 2021
3A9L
DownloadVisualize
BU of 3a9l by Molmil
Structure of Bacteriophage poly-gamma-glutamate hydrolase
Descriptor: PHOSPHATE ION, Poly-gamma-glutamate hydrolase, ZINC ION
Authors:Fujimoto, Z, Kimura, K.
Deposit date:2009-10-30
Release date:2010-11-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of bacteriophage PhiNIT1 zinc peptidase PghP that hydrolyzes gamma-glutamyl linkage of bacterial poly-gamma-glutamate
Proteins, 80, 2012
5Y6U
DownloadVisualize
BU of 5y6u by Molmil
Crystal structure of wild-type YabJ protein from Bacillus subtilis (natto).
Descriptor: ACETIC ACID, YabJ protein
Authors:Fujimoto, Z, Kishine, N, Kimura, K.
Deposit date:2017-08-15
Release date:2018-08-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tetramer formation of Bacillus subtilis YabJ protein that belongs to YjgF/YER057c/UK114 family.
Biosci.Biotechnol.Biochem., 85, 2021
4D7Y
DownloadVisualize
BU of 4d7y by Molmil
Crystal structure of mouse C1QL1 globular domain
Descriptor: C1Q-RELATED FACTOR, CADMIUM ION, CHLORIDE ION, ...
Authors:Kakegawa, W, Mitakidis, N, Miura, E, Abe, M, Matsuda, K, Takeo, Y, Kohda, K, Motohashi, J, Takahashi, A, Nagao, S, Muramatsu, S, Watanabe, M, Sakimura, K, Aricescu, A.R, Yuzaki, M.
Deposit date:2014-12-01
Release date:2015-01-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Anterograde C1Ql1 Signaling is Required in Order to Determine and Maintain a Single-Winner Climbing Fiber in the Mouse Cerebellum
Neuron, 85, 2015
<12

 

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon