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PDB: 39 results

8IEU
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BU of 8ieu by Molmil
Crystal structure of the DUF2891 family protein CJ0554 from Campylobacter jejuni in space group P41212
Descriptor: DUF2891 domain-containing protein
Authors:Kim, S.Y, Cho, H.Y, Yoon, S.I.
Deposit date:2023-02-16
Release date:2023-05-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unique dimeric structure of the DUF2891 family protein CJ0554 from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 655, 2023
8IEV
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BU of 8iev by Molmil
Crystal structure of the DUF2891 family protein CJ0554 from Campylobacter jejuni in space group C2
Descriptor: DUF2891 domain-containing protein
Authors:Kim, S.Y, Cho, H.Y, Yoon, S.I.
Deposit date:2023-02-16
Release date:2023-05-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Unique dimeric structure of the DUF2891 family protein CJ0554 from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 655, 2023
7R22
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BU of 7r22 by Molmil
Crystal structure of protein Mab3862 from Mycobacterium abscessus
Descriptor: ArsR family transcriptional regulator
Authors:Kim, S.Y, Eun, H.J, Lee, J.Y, Lee, B.J, Blundell, T.L.
Deposit date:2022-02-04
Release date:2022-03-02
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure of putative ArsR family regulator antitoxin from Mycobacterium abscessus (MAB_3862)
To Be Published
1B8U
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BU of 1b8u by Molmil
MALATE DEHYDROGENASE FROM AQUASPIRILLUM ARCTICUM
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXALOACETATE ION, PROTEIN (MALATE DEHYDROGENASE)
Authors:Kim, S.Y, Hwang, K.Y, Kim, S.-H, Han, Y.S, Cho, Y.
Deposit date:1999-02-02
Release date:1999-07-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
1B8P
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BU of 1b8p by Molmil
MALATE DEHYDROGENASE FROM AQUASPIRILLUM ARCTICUM
Descriptor: PROTEIN (MALATE DEHYDROGENASE)
Authors:Kim, S.Y, Hwang, K.Y, Kim, S.-H, Han, Y.S, Cho, Y.
Deposit date:1999-02-02
Release date:1999-07-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
1B8V
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BU of 1b8v by Molmil
Malate dehydrogenase from Aquaspirillum arcticum
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (MALATE DEHYDROGENASE)
Authors:Kim, S.Y, Hwang, K.Y, Kim, S.H, Han, Y.S, Cho, Y.
Deposit date:1999-02-02
Release date:1999-07-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for cold adaptation. Sequence, biochemical properties, and crystal structure of malate dehydrogenase from a psychrophile Aquaspirillium arcticum.
J.Biol.Chem., 274, 1999
8XJG
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BU of 8xjg by Molmil
Crystal structure of the YqeY protein from Vibrio parahaemolyticus
Descriptor: YqeY, ZINC ION
Authors:Kim, S.Y, Yoon, S.I.
Deposit date:2023-12-21
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the YqeY proteins from Campylobacter jejuni and Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 695, 2024
8XJE
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BU of 8xje by Molmil
Crystal structure of the YqeY protein from Campylobacter jejuni
Descriptor: YqeY
Authors:Kim, S.Y, Yoon, S.I.
Deposit date:2023-12-21
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the YqeY proteins from Campylobacter jejuni and Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 695, 2024
4ZKF
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BU of 4zkf by Molmil
Crystal structure of human phosphodiesterase 12
Descriptor: 2',5'-phosphodiesterase 12, MAGNESIUM ION
Authors:Kim, S.Y, Kohno, T, Mori, T, Kitano, K, Hakoshima, T.
Deposit date:2015-04-30
Release date:2015-06-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of human phosphodiesterase
To Be Published
3WE2
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BU of 3we2 by Molmil
Structure of BLM RQC domain bound to a phosphate ion
Descriptor: ACETATE ION, Bloom syndrome protein, PHOSPHATE ION
Authors:Kim, S.Y, Hakoshima, T, Kitano, K.
Deposit date:2013-06-28
Release date:2013-11-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the RecQ C-terminal Domain of Human Bloom Syndrome Protein
Sci Rep, 3, 2013
3WE3
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BU of 3we3 by Molmil
Structure of BLM RQC domain bound to an arsenate ion
Descriptor: ACETATE ION, ARSENATE, Bloom syndrome protein
Authors:Kim, S.Y, Hakoshima, T, Kitano, K.
Deposit date:2013-06-28
Release date:2013-11-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the RecQ C-terminal Domain of Human Bloom Syndrome Protein
Sci Rep, 3, 2013
2RRD
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BU of 2rrd by Molmil
Structure of HRDC domain from human Bloom syndrome protein, BLM
Descriptor: HRDC domain from Bloom syndrome protein
Authors:Sato, A, Mishima, M, Nagai, A, Kim, S.Y, Ito, Y, Hakoshima, T, Jee, J.G, Kitano, K.
Deposit date:2010-07-19
Release date:2010-09-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the HRDC domain of human Bloom syndrome protein BLM
J.Biochem., 148, 2010
3W05
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BU of 3w05 by Molmil
Crystal structure of Oryza sativa DWARF14 (D14) in complex with PMSF
Descriptor: 1,2-ETHANEDIOL, Dwarf 88 esterase, phenylmethanesulfonic acid
Authors:Kagiyama, M, Hirano, Y, Mori, T, Kim, S.Y, Kyozuka, J, Seto, Y, Yamaguchi, S, Hakoshima, T.
Deposit date:2012-10-19
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structures of D14 and D14L in the strigolactone and karrikin signaling pathways
Genes Cells, 18, 2013
5O08
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BU of 5o08 by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with Dephospho-coenzyme A
Descriptor: 1,2-ETHANEDIOL, DEPHOSPHO COENZYME A, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
5O0D
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BU of 5o0d by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 3-Phenoxymandelic acid (Fragment 4)
Descriptor: (2~{S})-2-oxidanyl-2-(3-phenoxyphenyl)ethanoic acid, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.539 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
6L2U
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BU of 6l2u by Molmil
Soluble methane monooxygenase reductase FAD-binding domain from Methylosinus sporium.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Methane monooxygenase
Authors:Park, J.H, Ha, S.C, Rao, Z, Yoo, H, Yoon, C, Kim, S.Y, Kim, D.S, Lee, S.J.
Deposit date:2019-10-07
Release date:2021-03-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Elucidation of the electron transfer environment in the MMOR FAD-binding domain from Methylosinus sporium 5.
Dalton Trans, 50, 2021
7ORZ
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BU of 7orz by Molmil
Crystal structure of UDP-N-acetylenolpyruvoylglucosamine reductase (MurB) from Pseudomonas aeruginosa in complex with FAD and a pyrazole derivative (fragment 18)
Descriptor: 1-phenyl-5-(trifluoromethyl)pyrazole-4-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Acebron-Garcia de Eulate, M, Blundell, T.L, Kim, S.Y, Mendes, V, Abell, C.
Deposit date:2021-06-06
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of Novel Inhibitors of Uridine Diphosphate- N -Acetylenolpyruvylglucosamine Reductase (MurB) from Pseudomonas aeruginosa , an Opportunistic Infectious Agent Causing Death in Cystic Fibrosis Patients.
J.Med.Chem., 65, 2022
7OR2
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BU of 7or2 by Molmil
Crystal structure of UDP-N-acetylenolpyruvoylglucosamine reductase (MurB) from Pseudomonas aeruginosa in complex with FAD and a pyrazole derivative (fragment 4)
Descriptor: 5-methyl-1-phenyl-pyrazole-4-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-acetylenolpyruvoylglucosamine reductase
Authors:Acebron-Garcia de Eulate, M, Blundell, T.L, Kim, S.Y, Mendes, V, Abell, C.
Deposit date:2021-06-04
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of Novel Inhibitors of Uridine Diphosphate- N -Acetylenolpyruvylglucosamine Reductase (MurB) from Pseudomonas aeruginosa , an Opportunistic Infectious Agent Causing Death in Cystic Fibrosis Patients.
J.Med.Chem., 65, 2022
7OSQ
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BU of 7osq by Molmil
Crystal structure of UDP-N-acetylenolpyruvoylglucosamine reductase (MurB) from Pseudomonas aeruginosa in complex with FAD and a pyrazole derivative (fragment 18)
Descriptor: 5-methyl-1-phenyl-1,2,3-triazole-4-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-acetylenolpyruvoylglucosamine reductase
Authors:Acebron-Garcia de Eulate, M, Mayol-Llinas, J, Blundell, T.L, Kim, S.Y, Mendes, V, Abell, C.
Deposit date:2021-06-09
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Discovery of Novel Inhibitors of Uridine Diphosphate- N -Acetylenolpyruvylglucosamine Reductase (MurB) from Pseudomonas aeruginosa , an Opportunistic Infectious Agent Causing Death in Cystic Fibrosis Patients.
J.Med.Chem., 65, 2022
2B8I
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BU of 2b8i by Molmil
Crystal Structure and Functional Studies Reveal that PAS Factor from Vibrio vulnificus is a Novel Member of the Saposin-Fold Family
Descriptor: PAS factor
Authors:Lee, J.H, Yang, S.T, Rho, S.H, Im, Y.J, Kim, S.Y, Kim, Y.R, Kim, M.K, Kang, G.B, Kim, J.I, Rhee, J.H, Eom, S.H.
Deposit date:2005-10-07
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and functional studies reveal that PAS factor from Vibrio vulnificus is a novel member of the saposin-fold family
J.Mol.Biol., 355, 2006
5O0H
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BU of 5o0h by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 2-(4-Chloro-3-nitrobenzoyl)benzoic acid (Fragment 6)
Descriptor: 2-(4-chloranyl-3-nitro-phenyl)carbonylbenzoic acid, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
5O0A
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BU of 5o0a by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 5-methyl-1-phenyl-pyrazole-4-carboxylic acid (Fragment 1)
Descriptor: 5-methyl-1-phenyl-pyrazole-4-carboxylic acid, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
5O0F
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BU of 5o0f by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 3-(indol-3-yl)propanoic acid (Fragment 5)
Descriptor: INDOLYLPROPIONIC ACID, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
5O0C
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BU of 5o0c by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 3-(3-methyl-1H-indol-1-yl)propanoic acid (Fragment 3)
Descriptor: 3-(3-methylindol-1-yl)propanoic acid, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
5O06
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BU of 5o06 by Molmil
Crystal structure of APO form of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus
Descriptor: 1,2-ETHANEDIOL, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.547 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017

 

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