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PDB: 443 results

6IZE
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BU of 6ize by Molmil
Dimeric human TCTP
Descriptor: Translationally-controlled tumor protein
Authors:Shin, D.H, Kim, M.S.
Deposit date:2018-12-19
Release date:2019-12-25
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Dimeric human TCTP
To Be Published
3TT7
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BU of 3tt7 by Molmil
Structure of ClpP from Bacillus subtilis in complex with DFP
Descriptor: ATP-dependent Clp protease proteolytic subunit, DIISOPROPYL PHOSPHONATE
Authors:Lee, B.-G, Kim, M.K, Song, H.K.
Deposit date:2011-09-14
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.558 Å)
Cite:Structural insights into the conformational diversity of ClpP from Bacillus subtilis
Mol.Cells, 32, 2011
3TT6
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BU of 3tt6 by Molmil
Structure of ClpP from Bacillus subtilis in compressed state
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Lee, B.-G, Kim, M.K, Song, H.K.
Deposit date:2011-09-14
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.592 Å)
Cite:Structural insights into the conformational diversity of ClpP from Bacillus subtilis
Mol.Cells, 32, 2011
3MCD
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BU of 3mcd by Molmil
Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Descriptor: Cell division topological specificity factor
Authors:Kang, G.B, Song, H.E, Kim, M.K, Youn, H.S, Lee, J.G, An, J.Y, Jeon, H, Chun, J.S, Eom, S.H.
Deposit date:2010-03-29
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Mol.Microbiol., 76, 2010
2PV6
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BU of 2pv6 by Molmil
HIV-1 gp41 Membrane Proximal Ectodomain Region peptide in DPC micelle
Descriptor: Envelope glycoprotein
Authors:Sun, Z.-Y.J, Oh, K.J, Kim, M, Reinherz, E.L, Wagner, G.
Deposit date:2007-05-09
Release date:2008-03-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:HIV-1 broadly neutralizing antibody extracts its epitope from a kinked gp41 ectodomain region on the viral membrane
Immunity, 28, 2008
6IZB
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BU of 6izb by Molmil
Flexible loop truncated human TCTP
Descriptor: Translationally-controlled tumor protein
Authors:Shin, D.H, Kim, M.S.
Deposit date:2018-12-19
Release date:2019-12-25
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Flexible loop truncated human TCTP
To Be Published
5XLN
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BU of 5xln by Molmil
Crystal structure of the TRS_UNE-T and 4EHP complex
Descriptor: Eukaryotic translation initiation factor 4E type 2, Threonine--tRNA ligase, cytoplasmic
Authors:Hwang, J, Nguyen, L.T, Kim, M.H.
Deposit date:2017-05-11
Release date:2018-11-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A threonyl-tRNA synthetase-mediated translation initiation machinery.
Nat Commun, 10, 2019
5Y7D
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BU of 5y7d by Molmil
Crystal structure of human Endothelial-overexpressed LPS associated factor 1
Descriptor: CHLORIDE ION, GLYCEROL, Protein CXorf40A, ...
Authors:Park, S.H, Kim, M.J, Park, J.S, Kim, H.J, Han, B.W.
Deposit date:2017-08-17
Release date:2018-08-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Crystal Structure of Human EOLA1 Implies Its Possibility of RNA Binding.
Molecules, 24, 2019
5Y16
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BU of 5y16 by Molmil
Crystal structure of human DUSP28(Y102H)
Descriptor: CHLORIDE ION, Dual specificity phosphatase 28, PHOSPHATE ION
Authors:Ku, B, Kim, M, Kim, S.J, Ryu, S.E.
Deposit date:2017-07-19
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural and biochemical analysis of atypically low dephosphorylating activity of human dual-specificity phosphatase 28
PLoS ONE, 12, 2017
5X3R
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BU of 5x3r by Molmil
Crystal structure of the SmcR complexed with QStatin
Descriptor: 1-(5-bromanylthiophen-2-yl)sulfonylpyrazole, LuxR family transcriptional regulator, SULFATE ION
Authors:Jang, S.Y, Hwang, J, Kim, M.H.
Deposit date:2017-02-07
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:QStatin, a Selective Inhibitor of Quorum Sensing inVibrioSpecies
MBio, 9, 2018
5Z0B
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BU of 5z0b by Molmil
Crystal structure of plasma-derived human serum albumin
Descriptor: DI(HYDROXYETHYL)ETHER, LINOLEIC ACID, OCTANOIC ACID (CAPRYLIC ACID), ...
Authors:Park, J, Kim, M.-S, Shin, D.H.
Deposit date:2017-12-19
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:The crystal structure of plasma-derived human serum albumin
To Be Published
3VSM
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BU of 3vsm by Molmil
The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
Descriptor: GLYCEROL, Occlusion-derived virus envelope protein E66
Authors:Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y.
Deposit date:2012-04-27
Release date:2013-05-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein
To be Published
1ET5
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BU of 1et5 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE ASP98ASN MUTANT FROM ALCALIGENES FAECALIS S-6
Descriptor: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1ET8
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BU of 1et8 by Molmil
CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASN MUTANT FROM ALCALIGENES FAECALIS
Descriptor: COPPER (II) ION, NITRITE REDUCTASE, ZINC ION
Authors:Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P.
Deposit date:2000-04-12
Release date:2000-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase.
J.Biol.Chem., 275, 2000
1EJ2
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BU of 1ej2 by Molmil
Crystal structure of methanobacterium thermoautotrophicum nicotinamide mononucleotide adenylyltransferase with bound NAD+
Descriptor: NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Saridakis, V, Christendat, D, Kimber, M.S, Edwards, A.M, Pai, E.F, Midwest Center for Structural Genomics (MCSG), Northeast Structural Genomics Consortium (NESG)
Deposit date:2000-02-29
Release date:2001-03-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes.
J.Biol.Chem., 276, 2001
3VK9
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BU of 3vk9 by Molmil
Crystal structure of delta-class glutathione transferase from silkmoth
Descriptor: GLYCEROL, Glutathione S-transferase delta
Authors:Kakuta, Y, Usuda, K, Higashiura, A, Suzuki, M, Nakagawa, A, Kimura, M, Yamamoto, K.
Deposit date:2011-11-10
Release date:2012-10-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase
Biochim.Biophys.Acta, 1820, 2012
3VVU
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BU of 3vvu by Molmil
Crystal structure of reconstructed bacterial ancestral NDK, Bac1
Descriptor: Nucleoside diphosphate kinase
Authors:Nemoto, N, Miyazono, K, Kimura, M, Yokobori, S, Akanuma, S, Tanokura, M, Yamagishi, A.
Deposit date:2012-07-27
Release date:2013-06-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Experimental evidence for the thermophilicity of ancestral life
Proc.Natl.Acad.Sci.USA, 110, 2013
3VVT
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BU of 3vvt by Molmil
Crystal structure of reconstructed archaeal ancestral NDK, Arc1
Descriptor: Nucleoside diphosphate kinase
Authors:Nemoto, N, Miyazono, K, Kimura, M, Yokobori, S, Akanuma, S, Tanokura, M, Yamagishi, A.
Deposit date:2012-07-27
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Experimental evidence for the thermophilicity of ancestral life
Proc.Natl.Acad.Sci.USA, 110, 2013
4FXQ
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BU of 4fxq by Molmil
Full-length Certhrax toxin from Bacillus cereus in complex with Inhibitor P6
Descriptor: 8-fluoro-2-(3-piperidin-1-ylpropanoyl)-1,3,4,5-tetrahydrobenzo[c][1,6]naphthyridin-6(2H)-one, CHLORIDE ION, Putative ADP-ribosyltransferase Certhrax, ...
Authors:Visschedyk, D.D, Dimov, S, Kimber, M.S, Park, H.W, Merrill, A.R.
Deposit date:2012-07-03
Release date:2012-09-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9599 Å)
Cite:Certhrax Toxin, an Anthrax-related ADP-ribosyltransferase from Bacillus cereus.
J.Biol.Chem., 287, 2012
1VCZ
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BU of 1vcz by Molmil
Crystal structure of the RNase NT in complex with 5'-GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, RNase NGR3
Authors:Kawano, S, Kakuta, Y, Kimura, M.
Deposit date:2004-03-17
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates
to be published
5HNP
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BU of 5hnp by Molmil
The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt
Descriptor: ABC transporter, CHLORIDE ION
Authors:Mallette, E, Mann, E, Whitfield, C, Kimber, M.S.
Deposit date:2016-01-18
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Klebsiella pneumoniae O12 ATP-binding Cassette (ABC) Transporter Recognizes the Terminal Residue of Its O-antigen Polysaccharide Substrate.
J.Biol.Chem., 291, 2016
7D5R
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BU of 7d5r by Molmil
Structure of the Ca2+-bound C646A mutant of peptidylarginine deiminase type III (PAD3)
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Mashimo, R, Akimoto, M, Unno, M.
Deposit date:2020-09-28
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.148 Å)
Cite:Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design.
Arch.Biochem.Biophys., 708, 2021
5L39
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BU of 5l39 by Molmil
The structure of the fused permuted hexameric shell protein MSM0275 from the RMM microcompartment
Descriptor: CHLORIDE ION, RMM microcompartment shell protein MSM0275
Authors:Mallette, E, Kimber, M.S.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
8CSF
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BU of 8csf by Molmil
WbbB D232C-Kdo adduct + alpha-Rha(1,3)GlcNAc ternary complex
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, CYTIDINE-5'-MONOPHOSPHATE, N-acetyl glucosaminyl transferase, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022
8CSE
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BU of 8cse by Molmil
WbbB in complex with alpha-Rha-(1-3)-beta-GlcNAc acceptor
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, N-(8-hydroxyoctyl)-4-methoxybenzamide, N-acetyl glucosaminyl transferase, ...
Authors:Forrester, T.J.B, Kimber, M.S.
Deposit date:2022-05-12
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The retaining beta-Kdo glycosyltransferase WbbB uses a double-displacement mechanism with an intermediate adduct rearrangement step.
Nat Commun, 13, 2022

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