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PDB: 438 results

4X3N
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Crystal structure of 34 kDa F-actin bundling protein from Dictyostelium discoideum
Descriptor: CALCIUM ION, CITRIC ACID, Calcium-regulated actin-bundling protein
Authors:Kim, M.-K, Kim, J.-H, Kim, J.-S, Kang, S.-O.
Deposit date:2014-12-01
Release date:2015-09-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of the 34 kDa F-actin-bundling protein ABP34 from Dictyostelium discoideum.
Acta Crystallogr.,Sect.D, 71, 2015
8JCT
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Crystal structure of fungal cutinase from Aspergillus fumigatiaffinis
Descriptor: Cutinase
Authors:Kim, M, Lee, S.H, Kim, K.-J.
Deposit date:2023-05-11
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization and engineering of novel fungal PET degrading enzyme from Aspergillus fumigatiaffinis
To Be Published
2G97
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Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase In Complex with the Specific Inhibitor FK-866
Descriptor: (2E)-N-{4-[1-(benzenecarbonyl)piperidin-4-yl]butyl}-3-(pyridin-3-yl)prop-2-enamide, Nicotinamide phosphoribosyltransferase
Authors:Kim, M.-K, Eom, S.H.
Deposit date:2006-03-05
Release date:2006-08-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
3CZL
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Crystal Structure Analysis of Sucrose hydrolase(SUH) E322Q-glucose complex
Descriptor: alpha-D-glucopyranose, sucrose hydrolase
Authors:Kim, M.I, Rhee, S.
Deposit date:2008-04-29
Release date:2008-07-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures and mutagenesis of sucrose hydrolase from Xanthomonas axonopodis pv. glycines: insight into the exclusively hydrolytic amylosucrase fold.
J.Mol.Biol., 380, 2008
3CZK
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Crystal Structure Analysis of Sucrose hydrolase(SUH) E322Q-sucrose complex
Descriptor: Sucrose hydrolase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Kim, M.I, Rhee, S.
Deposit date:2008-04-29
Release date:2008-07-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures and mutagenesis of sucrose hydrolase from Xanthomonas axonopodis pv. glycines: insight into the exclusively hydrolytic amylosucrase fold.
J.Mol.Biol., 380, 2008
1IVU
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Crystal structure of copper amine oxidase from Arthrobacter globiformis: Initial intermediate in topaquinone biogenesis
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
1IVV
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Crystal structure of copper amine oxidase from Arthrobacter globiformis: Early intermediate in topaquinone biogenesis
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
4GQX
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Crystal structure of EIIA(NTR) from Burkholderia pseudomallei
Descriptor: PTS IIA-like nitrogen-regulatory protein PtsN
Authors:Kim, M.-S, Shin, D.H.
Deposit date:2012-08-24
Release date:2013-03-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:New molecular interaction of IIA(Ntr) and HPr from Burkholderia pseudomallei identified by X-ray crystallography and docking studies
Proteins, 81, 2013
7X7H
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Crystal structure of Fructose regulator/Histidine phosphocarrier protein complex from Vibrio cholerae
Descriptor: CALCIUM ION, Catabolite repressor/activator, HPr family phosphocarrier protein
Authors:Kim, M.-K, Zhang, J, Yoon, C.-K, Seok, Y.-J.
Deposit date:2022-03-09
Release date:2023-03-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:HPr prevents FruR-mediated facilitation of RNA polymerase binding to the fru promoter in Vibrio cholerae.
Nucleic Acids Res., 51, 2023
2UZ0
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The Crystal crystal structure of the estA protein, a virulence factor estA protein from Streptococcus pneumonia
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Kim, M.H, Kang, B.S, Kim, K.J, Oh, T.K.
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of the Esta Protein, a Virulence Factor from Streptococcus Pneumoniae.
Proteins, 70, 2008
2C0J
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Crystal structure of the bet3-trs33 heterodimer
Descriptor: PALMITIC ACID, R32611_2, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Authors:Kim, M.-S, Yi, M.-J, Lee, K.-H, Wagner, J, Munger, C, Kim, Y.-G, Whiteway, M, Cygler, M, Oh, B.-H, Sacher, M.
Deposit date:2005-09-03
Release date:2006-02-07
Last modified:2015-01-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and Crystallographic Studies Reveal a Specific Interaction between Trapp Subunits Trs33P and Bet3P
Traffic, 6, 2005
2BR6
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Crystal Structure of Quorum-Quenching N-Acyl Homoserine Lactone Lactonase
Descriptor: AIIA-LIKE PROTEIN, GLYCEROL, HOMOSERINE LACTONE, ...
Authors:Kim, M.H, Choi, W.C, Kang, H.O, Kang, B.S, Kim, K.J, Derewenda, Z.S, Lee, J.K, Oh, T.K, Lee, C.H.
Deposit date:2005-05-03
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Molecular Structure and Catalytic Mechanism of a Quorum-Quenching N-Acyl-L-Homoserine Lactone Hydrolase.
Proc.Natl.Acad.Sci.USA, 102, 2005
2BTN
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Crystal Structure and Catalytic Mechanism of the Quorum-Quenching N- Acyl Homoserine Lactone Hydrolase
Descriptor: AIIA-LIKE PROTEIN, GLYCEROL, ZINC ION
Authors:Kim, M.H, Choi, W.C, Kang, H.O, Lee, J.S, Kang, B.S, Kim, K.J, Derewenda, Z.S, Oh, T.K, Lee, C.H, Lee, J.K.
Deposit date:2005-06-03
Release date:2005-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Molecular Structure and Catalytic Mechanism of a Quorum-Quenching N-Acyl-L-Homoserine Lactone Hydrolase.
Proc.Natl.Acad.Sci.USA, 102, 2005
6IMP
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BU of 6imp by Molmil
Crystal structure of alpha-beta hydrolase (ABH) from Vibrio vulnificus
Descriptor: RTX toxin RtxA
Authors:Kim, M.H, Hwang, J.
Deposit date:2018-10-23
Release date:2019-08-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
3KZ9
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Crystal structure of the master transcriptional regulator, SmcR, in Vibrio vulnificus provides insight into its DNA recognition mechanism
Descriptor: SULFATE ION, SmcR
Authors:Kim, M.H, Kim, Y, Choi, W.-C, Hwang, J.
Deposit date:2009-12-08
Release date:2010-03-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription
J.Biol.Chem., 285, 2010
5ZQH
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BU of 5zqh by Molmil
Crystal structure of Streptococcus transcriptional regulator
Descriptor: PadR family transcriptional regulator
Authors:Kim, M, Hong, M.
Deposit date:2018-04-19
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based functional analysis of a PadR transcription factor from Streptococcus pneumoniae and characteristic features in the PadR subfamily-2.
Biochem.Biophys.Res.Commun., 532, 2020
1GVI
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Thermus maltogenic amylase in complex with beta-CD
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), MALTOGENIC AMYLASE
Authors:Kim, M.-S, Kim, J.-I, Oh, B.-H.
Deposit date:2002-02-14
Release date:2002-06-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Cyclomaltodextrinase, Neopullulanase, and Maltogenic Amylase are Nearly Indistinguishable from Each Other
J.Biol.Chem., 277, 2002
5IE9
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BU of 5ie9 by Molmil
Crystal structure of the Bacillus-conserved MazG protein, a nucleotide pyrophosphohydrolase
Descriptor: MANGANESE (II) ION, Nucleotide pyrophosphohydrolase
Authors:Kim, M, Hong, M.
Deposit date:2016-02-25
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the Bacillus-conserved MazG protein, a nucleotide pyrophosphohydrolase.
Biochem.Biophys.Res.Commun., 472, 2016
2G95
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Crystal Structure of Visfatin/Pre-B Cell Colony Enhancing Factor 1/Nicotinamide Phosphoribosyltransferase
Descriptor: Nicotinamide phosphoribosyltransferase
Authors:Kim, M.-K, Eom, S.H.
Deposit date:2006-03-05
Release date:2006-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Visfatin/Pre-B Cell Colony-enhancing Factor 1/Nicotinamide Phosphoribosyltransferase, Free and in Complex with the Anti-cancer Agent FK-866
J.Mol.Biol., 362, 2006
2GQT
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Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus
Descriptor: CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-Acetylenolpyruvylglucosamine Reductase
Authors:Kim, M.-K, Eom, S.H.
Deposit date:2006-04-21
Release date:2006-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase (MurB) from Thermus caldophilus
Proteins, 66, 2006
3IO4
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Huntingtin amino-terminal region with 17 Gln residues - Crystal C90
Descriptor: CALCIUM ION, Maltose-binding periplasmic protein,Huntingtin fusion protein, ZINC ION
Authors:Kim, M.W, Chelliah, Y, Kim, S.W, Otwinowski, Z, Bezprozvanny, I.
Deposit date:2009-08-13
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.63 Å)
Cite:Secondary structure of Huntingtin amino-terminal region.
Structure, 17, 2009
3IO6
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Huntingtin amino-terminal region with 17 Gln residues - crystal C92-a
Descriptor: CALCIUM ION, Maltose-binding periplasmic protein, HUNTINGTIN FUSION PROTEIN, ...
Authors:Kim, M.W, Chelliah, Y, Kim, S.W, Otwinowski, Z, Bezprozvanny, I.
Deposit date:2009-08-13
Release date:2009-10-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Secondary structure of Huntingtin amino-terminal region.
Structure, 17, 2009
6A7H
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Bacterial protein toxins
Descriptor: RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-03
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
6A8J
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Crystal structure of bacterial protein toxins
Descriptor: GLYCEROL, RTX toxin, SULFATE ION
Authors:Kim, M.H, Hwang, J, Jang, S.Y.
Deposit date:2018-07-09
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.711 Å)
Cite:Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
7WG4
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DVAA-KlAte1
Descriptor: Arginyltransferase, ZINC ION
Authors:Kim, M.K, Kim, B.H, Oh, S.-J, Song, H.K.
Deposit date:2021-12-28
Release date:2022-09-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.
Proc.Natl.Acad.Sci.USA, 119, 2022

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