Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 628 results

2L4M
DownloadVisualize
BU of 2l4m by Molmil
Solution structure of the Zbeta domain of human DAI and its binding modes to B- and Z-DNA
Descriptor: Uncharacterized protein
Authors:Kim, K, Khayrutdinov, B.I, Jeon, Y.H, Kim, K.K.
Deposit date:2010-10-08
Release date:2011-04-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Zbeta domain of human DNA-dependent activator of IFN-regulatory factors and its binding modes to B- and Z-DNA
Proc.Natl.Acad.Sci.USA, 2011
4TX1
DownloadVisualize
BU of 4tx1 by Molmil
The crystal structure of carbohydrate acetylesterase family member from Sinorhizobium meliloti
Descriptor: Esterase
Authors:Kim, K, Kim, S.S, Pandian, R, Ngo, T.D.
Deposit date:2014-07-02
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and biochemical characterization of a carbohydrate acetylesterase from Sinorhizobium meliloti 1021.
Febs Lett., 589, 2015
3UY5
DownloadVisualize
BU of 3uy5 by Molmil
crystal structure of Eis from Mycobacterium tuberculosis
Descriptor: Enhanced intracellular survival protein
Authors:Kim, K.H, Suh, S.W.
Deposit date:2011-12-05
Release date:2012-05-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7
Proc.Natl.Acad.Sci.USA, 2012
5G2C
DownloadVisualize
BU of 5g2c by Molmil
The crystal structure of light-driven chloride pump ClR (T102D) mutant at pH 4.5.
Descriptor: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
2KXX
DownloadVisualize
BU of 2kxx by Molmil
NMR Structure of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex
Descriptor: Small protein A
Authors:Kim, K, Okon, M, Escobar, E, Kang, H, McIntosh, L, Paetzel, M.
Deposit date:2010-05-13
Release date:2011-01-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of Escherichia coli BamE, a Lipoprotein Component of the beta-Barrel Assembly Machinery Complex.
Biochemistry, 50, 2011
5G2A
DownloadVisualize
BU of 5g2a by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0 with Bromide ion.
Descriptor: BROMIDE ION, CHLORIDE PUMPING RHODOPSIN, RETINAL
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5FJG
DownloadVisualize
BU of 5fjg by Molmil
The crystal structure of light-driven chloride pump ClR in pH 4.5.
Descriptor: ANHYDRORETINOL, CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2015-10-07
Release date:2016-11-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Light-Driven Chloride Pump Clr in Ph 4.5.
To be Published
5XDA
DownloadVisualize
BU of 5xda by Molmil
Structural basis for Ufm1 recognition by UfSP
Descriptor: Ubiquitin-fold modifier 1, Ufm1-specific protease
Authors:Kim, K.H, Ha, B.H, Kim, E.E.
Deposit date:2017-03-28
Release date:2018-02-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.285 Å)
Cite:Structural basis for Ufm1 recognition by UfSP
FEBS Lett., 592, 2018
4EDA
DownloadVisualize
BU of 4eda by Molmil
Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
Deposit date:2012-03-27
Release date:2013-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Insight into structural diversity of influenza virus haemagglutinin
J.Gen.Virol., 94, 2013
4EDB
DownloadVisualize
BU of 4edb by Molmil
Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Descriptor: Hemagglutinin
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
Deposit date:2012-03-27
Release date:2013-05-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into structural diversity of influenza virus haemagglutinin
J.Gen.Virol., 94, 2013
4J15
DownloadVisualize
BU of 4j15 by Molmil
Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Descriptor: Aspartate--tRNA ligase, cytoplasmic, GLYCEROL
Authors:Kim, K.R, Park, S.H, Kim, H.S, Kim, B.-G, Kim, D.G, Rhee, K.H, Park, M.S, Kim, H.-J, Kim, S, Han, B.W.
Deposit date:2013-02-01
Release date:2013-05-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Proteins, 81, 2013
2QKY
DownloadVisualize
BU of 2qky by Molmil
complex structure of dipeptidyl peptidase IV and a oxadiazolyl ketone
Descriptor: 2-[(2-{(2S,4S)-2-[(R)-(5-tert-butyl-1,3,4-oxadiazol-2-yl)(hydroxy)methyl]-4-fluoropyrrolidin-1-yl}-2-oxoethyl)amino]-2-methylpropan-1-ol, Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (TP103) (Adenosine deaminase complexing protein 2) (ADABP) (Dipeptidyl peptidase 4 soluble form) (Dipeptidyl peptidase IV soluble form)
Authors:Kim, K.-H, Hong, S.Y, Koo, K.D, Lee, C.-S, Kim, G.T, Han, H.O.
Deposit date:2007-07-12
Release date:2008-07-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Synthesis, SAR, and X-ray structure of novel potent DPPIV inhibitors: oxadiazolyl ketones.
Bioorg.Med.Chem.Lett., 17, 2007
1EIF
DownloadVisualize
BU of 1eif by Molmil
EUKARYOTIC TRANSLATION INITIATION FACTOR 5A FROM METHANOCOCCUS JANNASCHII
Descriptor: EUKARYOTIC TRANSLATION INITIATION FACTOR 5A
Authors:Kim, K.K, Hung, L.W, Yokota, H, Kim, R, Kim, S.H.
Deposit date:1998-07-29
Release date:1998-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of eukaryotic translation initiation factor 5A from Methanococcus jannaschii at 1.8 A resolution.
Proc.Natl.Acad.Sci.USA, 95, 1998
4F15
DownloadVisualize
BU of 4f15 by Molmil
Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Descriptor: Fab fragment, heavy chain, light chain, ...
Authors:Kim, K.H, Cho, K.J, Lee, J.H, Park, Y.H, Khan, T.G, Lee, J.Y, Kang, S.H, Alam, I.
Deposit date:2012-05-06
Release date:2013-05-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
To be Published
5G54
DownloadVisualize
BU of 5g54 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 4.5
Descriptor: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-05-19
Release date:2016-10-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G28
DownloadVisualize
BU of 5g28 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0.
Descriptor: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, OLEIC ACID, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2D
DownloadVisualize
BU of 5g2d by Molmil
The crystal structure of light-driven chloride pump ClR (T102N) mutant at pH 4.5.
Descriptor: CHLORIDE ION, CHLORIDE PUMP RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
Deposit date:2016-04-07
Release date:2016-10-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5ET3
DownloadVisualize
BU of 5et3 by Molmil
Crystal Structure of De novo Designed Fullerene organizing peptide
Descriptor: (C_{60}-I_{h})[5,6]fullerene, Fullerene Organizing Protein (C60Sol-COP-3)
Authors:Kim, K.-H, Kim, Y.H, Acharya, R, Kim, N.H, Paul, J, Grigoryan, G, DeGrado, W.F.
Deposit date:2015-11-17
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.671 Å)
Cite:Protein-directed self-assembly of a fullerene crystal.
Nat Commun, 7, 2016
9NSC
DownloadVisualize
BU of 9nsc by Molmil
Bacterial Pictet-Spenglerase KslB in complex with L-Trp
Descriptor: Pictet-Spenglerase, TRYPTOPHAN
Authors:Kim, K, Kim, W.
Deposit date:2025-03-16
Release date:2025-04-23
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and mechanistic insights into KslB, a bacterial Pictet-Spenglerase in kitasetaline biosynthesis.
Rsc Chem Biol, 2025
9NSU
DownloadVisualize
BU of 9nsu by Molmil
Bacterial Pictet-Spenglerase KslB in complex with product of L-Trp and succinic semialdehyde
Descriptor: (1S,3S)-1-(2-carboxyethyl)-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole-3-carboxylic acid, Pictet-Spenglerase
Authors:Kim, K, Kim, W.
Deposit date:2025-03-17
Release date:2025-04-23
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structural and mechanistic insights into KslB, a bacterial Pictet-Spenglerase in kitasetaline biosynthesis.
Rsc Chem Biol, 2025
9NSS
DownloadVisualize
BU of 9nss by Molmil
Bacterial Pictet-Spenglerase KslB in complex with L-Trp alternative binding mode
Descriptor: Pictet-Spenglerase, TRYPTOPHAN
Authors:Kim, K, Kim, W.
Deposit date:2025-03-17
Release date:2025-04-23
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural and mechanistic insights into KslB, a bacterial Pictet-Spenglerase in kitasetaline biosynthesis.
Rsc Chem Biol, 2025
9NST
DownloadVisualize
BU of 9nst by Molmil
Bacterial Pictet-Spenglerase KslB in complex with product of L-Trp and a-ketoglutaric acid
Descriptor: (1~{S},3~{S})-1-(3-hydroxy-3-oxopropyl)-2,3,4,9-tetrahydropyrido[3,4-b]indole-1,3-dicarboxylic acid, Pictet-Spenglerase
Authors:Kim, K, Kim, W.
Deposit date:2025-03-17
Release date:2025-04-23
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and mechanistic insights into KslB, a bacterial Pictet-Spenglerase in kitasetaline biosynthesis.
Rsc Chem Biol, 2025
9NS6
DownloadVisualize
BU of 9ns6 by Molmil
KslB apoenzyme
Descriptor: Pictet-Spenglerase
Authors:Kim, K, Kim, W.
Deposit date:2025-03-16
Release date:2025-04-23
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural and mechanistic insights into KslB, a bacterial Pictet-Spenglerase in kitasetaline biosynthesis.
Rsc Chem Biol, 2025
2EIF
DownloadVisualize
BU of 2eif by Molmil
Eukaryotic translation initiation factor 5A from Methanococcus jannaschii
Descriptor: PROTEIN (EUKARYOTIC TRANSLATION INITIATION FACTOR 5A)
Authors:Kim, K.K, Hung, L.W, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1998-10-12
Release date:1999-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of eukaryotic translation initiation factor 5A from Methanococcus jannaschii at 1.8 A resolution.
Proc.Natl.Acad.Sci.USA, 95, 1998
3RYO
DownloadVisualize
BU of 3ryo by Molmil
Crystal Structure of Enhanced Intracellular Survival (Eis) Protein from Mycobacterium tuberculosis with Acetyl CoA
Descriptor: ACETYL COENZYME *A, Enhanced intracellular survival protein
Authors:Kim, K.H, An, D.R, Yoon, J.Y, Kim, H.S, Yoon, H.J, Song, J, Im, H.N, Kim, J, Kim, D.J, Lee, S.J, Kim, H.J, Lee, J.Y, Suh, S.W.
Deposit date:2011-05-11
Release date:2012-05-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7
Proc.Natl.Acad.Sci.USA, 2012

236060

PDB entries from 2025-05-14

PDB statisticsPDBj update infoContact PDBjnumon