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PDB: 868 results

4N5M
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BU of 4n5m by Molmil
Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase from Ralstonia eutropha in complexed with acetoacetyl-CoA
Descriptor: ACETOACETYL-COENZYME A, Acetoacetyl-CoA reductase, GLYCEROL
Authors:Kim, J.-E, Kim, S, Kim, K.-J.
Deposit date:2013-10-10
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase PhaB from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 443, 2014
4N5L
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BU of 4n5l by Molmil
Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase from Ralstonia eutropha
Descriptor: Acetoacetyl-CoA reductase
Authors:Kim, J.-E, Kim, S, Kim, K.-J.
Deposit date:2013-10-10
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase PhaB from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 443, 2014
4N5N
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BU of 4n5n by Molmil
Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase from Ralstonia eutropha in complexed with NADP
Descriptor: Acetoacetyl-CoA reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kim, J.-E, Kim, S, Kim, K.-J.
Deposit date:2013-10-10
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase PhaB from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 443, 2014
5GS1
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BU of 5gs1 by Molmil
Crystal structure of homo-specific diabody
Descriptor: diabody, heavy chain, light chain
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-13
Release date:2016-10-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRZ
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BU of 5grz by Molmil
Crystal structure of disulfide-bonded diabody
Descriptor: diabody
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-13
Release date:2016-10-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GS2
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BU of 5gs2 by Molmil
Crystal structure of diabody complex with repebody and MBP
Descriptor: Maltose-binding periplasmic protein, anti-MBP, anti-repebody, ...
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-13
Release date:2016-10-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.592 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRY
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BU of 5gry by Molmil
Crystal structure of disulfide-bonded diabody
Descriptor: diabody
Authors:Kim, J.H, Song, D.H, Youn, S.J, Kim, J.W, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.639 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
5GRU
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BU of 5gru by Molmil
Structure of mono-specific diabody
Descriptor: Maltose-binding periplasmic protein, diabody protein
Authors:Kim, J.H, Song, D.H, Youn, S.J, Cho, G, Lee, H, Lee, J.O.
Deposit date:2016-08-12
Release date:2016-10-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:Crystal structure of mono- and bi-specific diabodies and reduction of their structural flexibility by introduction of disulfide bridges at the Fv interface.
Sci Rep, 6, 2016
4TQ1
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BU of 4tq1 by Molmil
Crystal structure of human ATG5-TECAIR
Descriptor: Autophagy protein 5, Tectonin beta-propeller repeat-containing protein 1
Authors:Kim, J.H, Hong, S.B, Song, H.K.
Deposit date:2014-06-10
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners
Autophagy, 11, 2015
8YS9
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BU of 8ys9 by Molmil
Crystal structure of Phosphatidylethanolamine N-methyltransferase from R. thermophilum complexed with DMPE and SAH
Descriptor: DODECYL-BETA-D-MALTOSIDE, L(+)-TARTARIC ACID, Phosphatidylethanolamine N-methyltransferase/phosphatidyl-N-methylethanolamine N-methyltransferase, ...
Authors:Kim, J, Salsabila, S.D.
Deposit date:2024-03-22
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural insights into phosphatidylethanolamine N -methyltransferase PmtA mediating bacterial phosphatidylcholine synthesis.
Sci Adv, 10, 2024
4TQ0
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BU of 4tq0 by Molmil
Crystal structure of human ATG5-ATG16N69
Descriptor: Autophagy protein 5, Autophagy-related protein 16-1
Authors:Kim, J.H, Hong, S.B, Song, H.K.
Deposit date:2014-06-10
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners
Autophagy, 11, 2015
8YR5
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BU of 8yr5 by Molmil
Crystal structure of E. coli phosphatidylserine synthase in apo state
Descriptor: CDP-diacylglycerol--serine O-phosphatidyltransferase, SULFATE ION
Authors:Kim, J, Lee, E, Cho, G.
Deposit date:2024-03-20
Release date:2024-11-20
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structural basis for membrane association and catalysis by phosphatidylserine synthase in Escherichia coli.
Sci Adv, 10, 2024
8YR6
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BU of 8yr6 by Molmil
Crystal structure of E. coli phosphatidylserine synthase complexed with 16:0/16:0 CDP-DG
Descriptor: CDP-diacylglycerol--serine O-phosphatidyltransferase, Cdp-DG(16:0/16:0), SULFATE ION
Authors:Kim, J, Lee, E, Cho, G.
Deposit date:2024-03-20
Release date:2024-11-20
Last modified:2025-01-15
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural basis for membrane association and catalysis by phosphatidylserine synthase in Escherichia coli.
Sci Adv, 10, 2024
9JT7
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BU of 9jt7 by Molmil
SFX reaction state structure (0-60min) of alanine racemase
Descriptor: ALANINE, Alanine racemase 2, CHLORIDE ION, ...
Authors:Kim, J, Nam, K.H, Cho, Y.
Deposit date:2024-10-02
Release date:2025-01-01
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Exploring the reaction dynamics of alanine racemase using serial femtosecond crystallography.
Sci Rep, 14, 2024
1ZB1
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BU of 1zb1 by Molmil
Structure basis for endosomal targeting by the Bro1 domain
Descriptor: BRO1 protein
Authors:Kim, J, Sitaraman, S, Hierro, A, Beach, B.M, Odorizzi, G, Hurley, J.H.
Deposit date:2005-04-07
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for endosomal targeting by the Bro1 domain.
Dev.Cell, 8, 2005
1PZZ
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BU of 1pzz by Molmil
Crystal structure of FGF-1, V51N mutant
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Kim, J, Blaber, M.
Deposit date:2003-07-14
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005
1Q04
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BU of 1q04 by Molmil
Crystal structure of FGF-1, S50E/V51N
Descriptor: FORMIC ACID, Heparin-binding growth factor 1
Authors:Kim, J, Blaber, M.
Deposit date:2003-07-15
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005
1Q03
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BU of 1q03 by Molmil
Crystal structure of FGF-1, S50G/V51G mutant
Descriptor: Heparin-binding growth factor 1
Authors:Kim, J, Blaber, M.
Deposit date:2003-07-15
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005
9JG0
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BU of 9jg0 by Molmil
Cryo-EM structure of neuropeptide FF receptor 2 in the ligand-free state with BRIL fusion, anti-BRIL Fab, and nanobody
Descriptor: Anti-BRIL fab heavy chain, Anti-BRIL fab light chain, Anti-fab nanobody, ...
Authors:Kim, J, Choi, H.-J.
Deposit date:2024-09-05
Release date:2025-04-09
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural insights into the selective recognition of RF-amide peptides by neuropeptide FF receptor 2.
Embo Rep., 26, 2025
9JFY
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BU of 9jfy by Molmil
Cryo-EM structure of Neuropeptide FF receptor 2 in complex with hNPSF and Gi
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Kim, J, Choi, H.-J.
Deposit date:2024-09-05
Release date:2025-04-09
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural insights into the selective recognition of RF-amide peptides by neuropeptide FF receptor 2.
Embo Rep., 26, 2025
7MBJ
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BU of 7mbj by Molmil
Crystal structure of cGMP dependent protein kinase I alpha (PKG I alpha)CNB-A domain with R177Q mutation
Descriptor: cGMP-dependent protein kinase 1
Authors:Kim, J.J, Casteel, D.E, Kim, C.
Deposit date:2021-03-31
Release date:2022-05-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:An auto-inhibited state of protein kinase G and implications for selective activation.
Elife, 11, 2022
7CT6
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BU of 7ct6 by Molmil
Crystal structure of GCL from Deinococcus metallilatus
Descriptor: Glyoxylate carboligase
Authors:Kim, J.H, Kim, J.S.
Deposit date:2020-08-18
Release date:2021-08-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Glyoxylate carboligase-based whole-cell biotransformation of formaldehyde into ethylene glycol via glycolaldehyde.
Green Chem, 1, 2022
4NAV
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BU of 4nav by Molmil
Crystal structure of hypothetical protein XCC2798 from Xanthomonas campestris, Target EFI-508608
Descriptor: HYPOTHETICAL PROTEIN XCC279
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Zhao, S.C, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Stead, M, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-10-22
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of hypothetical protein XCC2798 from Xanthomonas campestris, Target EFI-508608
TO BE PUBLISHED
5GHG
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BU of 5ghg by Molmil
Transaminase W58L with SMBA
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase class-III
Authors:Kim, J, Park, J.
Deposit date:2016-06-20
Release date:2017-05-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active Site Engineering of omega-Transaminase Guided by Docking Orientation Analysis and Virtual Activity Screening
Acs Catalysis, 7, 2017
5GHF
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BU of 5ghf by Molmil
Transaminase with L-ala
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase class-III
Authors:Kim, J, Park, J.
Deposit date:2016-06-19
Release date:2017-05-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active Site Engineering of omega-Transaminase Guided by Docking Orientation Analysis and Virtual Activity Screening
Acs Catalysis, 7, 2017

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