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PDB: 132 件

4DXI
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BU of 4dxi by Molmil
Crystal Structure of an Ancestor of All Faviina Proteins
分子名称: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
著者Kim, H, Wachter, R.M.
登録日2012-02-27
公開日2013-02-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015
4GOB
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BU of 4gob by Molmil
Low pH Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA)
分子名称: Kaede-type Fluorescent Protein
著者Kim, H, Grunkemeyer, T.J, Chen, L, Fromme, R, Wachter, R.M.
登録日2012-08-19
公開日2013-07-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Acid-base catalysis and crystal structures of a least evolved ancestral GFP-like protein undergoing green-to-red photoconversion.
Biochemistry, 52, 2013
5X90
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BU of 5x90 by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA derived from Legionella pneumophila
分子名称: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
著者Kim, H, Kwak, M.J, Kim, J.D, Kim, Y.G, Oh, B.H.
登録日2017-03-04
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
7YCJ
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BU of 7ycj by Molmil
Crystal structure of Vac8 bound to Vac17
分子名称: Vacuolar protein 8, vacuole-related protein 17
著者Kim, H, Kim, H, Lee, C.
登録日2022-07-01
公開日2023-07-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Crystal structure of Vac8 bound to Vac17
To Be Published
7WRQ
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BU of 7wrq by Molmil
Structure of Human IGF1/IGFBP3/ALS Ternary Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin-like growth factor-binding protein 3, Insulin-like growth factor-binding protein complex acid labile subunit, ...
著者Kim, H, Fu, Y, Kim, H.M.
登録日2022-01-27
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for assembly and disassembly of the IGF/IGFBP/ALS ternary complex
Nat Commun, 13, 2022
1GYP
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BU of 1gyp by Molmil
CRYSTAL STRUCTURE OF GLYCOSOMAL GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM LEISHMANIA MEXICANA: IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN AND A NEW POSITION FOR THE INORGANIC PHOSPHATE BINDING SITE
分子名称: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION
著者Kim, H, Feil, I.K, Verlinde, C.L.M.J, Petra, P.H, Hol, W.G.J.
登録日1995-08-01
公開日1995-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of glycosomal glyceraldehyde-3-phosphate dehydrogenase from Leishmania mexicana: implications for structure-based drug design and a new position for the inorganic phosphate binding site.
Biochemistry, 34, 1995
1J32
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BU of 1j32 by Molmil
Aspartate Aminotransferase from Phormidium lapideum
分子名称: PYRIDOXAL-5'-PHOSPHATE, aspartate aminotransferase
著者Kim, H, Sawa, Y, Hamada, K.
登録日2003-01-17
公開日2003-02-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural studies of aspartate aminotransferase from Phormidium lapideum
To be Published
6NBA
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BU of 6nba by Molmil
Crystal structure of Human Cystathionine gamma lyase with S-3-Carboxpropyl-L-Cysteine
分子名称: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine gamma-lyase
著者Kim, H, Yadav, P.K, Banerjee, R, Cho, U.-S.
登録日2018-12-06
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献S-3-Carboxypropyl-l-cysteine specifically inhibits cystathionine gamma-lyase-dependent hydrogen sulfide synthesis.
J.Biol.Chem., 294, 2019
7VWX
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BU of 7vwx by Molmil
CryoEM structure of football-shaped GroEL:ES2 with RuBisCO
分子名称: Chaperonin GroEL, Co-chaperonin GroES, Ribulose bisphosphate carboxylase
著者Kim, H, Roh, S.H.
登録日2021-11-12
公開日2022-01-12
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Cryo-EM structures of GroEL:ES 2 with RuBisCO visualize molecular contacts of encapsulated substrates in a double-cage chaperonin.
Iscience, 25, 2022
7X14
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BU of 7x14 by Molmil
Crystal structure of phospho-FFAT motif of MIGA2 bound to VAPB
分子名称: MIGA2 phospho FFAT motif, SULFATE ION, Vesicle-associated membrane protein-associated protein B
著者Kim, H, Lee, C.
登録日2022-02-23
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.675 Å)
主引用文献Structural basis for mitoguardin-2 mediated lipid transport at ER-mitochondrial membrane contact sites.
Nat Commun, 13, 2022
7X15
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BU of 7x15 by Molmil
Crystal structure of MIGA2 LD targeting domain
分子名称: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, FORMIC ACID, Mitoguardin 2
著者Kim, H, Lee, C.
登録日2022-02-23
公開日2022-09-14
実験手法X-RAY DIFFRACTION (2.852 Å)
主引用文献Structural basis for mitoguardin-2 mediated lipid transport at ER-mitochondrial membrane contact sites.
Nat Commun, 13, 2022
2MSY
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BU of 2msy by Molmil
Solution structure of Hox homeodomain
分子名称: Homeobox protein Hox-C9
著者Kim, H, Park, S, Han, J, Lee, B.
登録日2014-08-11
公開日2015-09-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insight into the interaction between the Hox and HMGB1 and understanding of the HMGB1-enhancing effect of Hox-DNA binding.
Biochim.Biophys.Acta, 1854, 2015
3OUH
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BU of 3ouh by Molmil
PHD2-R127 with JNJ41536014
分子名称: 1-(5-chloro-6-fluoro-1H-benzimidazol-2-yl)-1H-pyrazole-4-carboxylic acid, Egl nine homolog 1, FE (II) ION, ...
著者Kim, H, Clark, R.
登録日2010-09-14
公開日2010-12-01
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Benzimidazole-2-pyrazole HIF Prolyl 4-Hydroxylase Inhibitors as Oral Erythropoietin Secretagogues.
ACS Med Chem Lett, 1, 2010
8HEJ
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BU of 8hej by Molmil
Crystal structure of Transthyretin in complex with a covalent inhibitor trans-styrylpyrazole
分子名称: 2,4,6-trifluorobenzaldehyde, 2,6-dibromo-4-[(E)-2-(3,5-dimethyl-1H-pyrazol-4-yl)ethenyl]phenol, Transthyretin
著者Kim, H, Choi, S, Lee, C.
登録日2022-11-08
公開日2023-11-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structure of Transthyretin in complex with a covalent inhibitor trans-styrylpyrazole
To Be Published
8YBE
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BU of 8ybe by Molmil
Cryo-EM structure of Maltose Binding Protein
分子名称: Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoo, Y, Park, K, Kim, H.
登録日2024-02-13
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Atomic resolution structure of MBP using Cryo-EM
To Be Published
8X6M
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BU of 8x6m by Molmil
Crystal Structure of Glycerol Dehydrogenase in the Presence of NAD+ and Glycerol
分子名称: GLYCEROL, Glycerol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, T, Kang, J.Y, Jin, M, Yang, J, Kim, H, Noh, C, Eom, S.H.
登録日2023-11-21
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the octamerization of glycerol dehydrogenase.
Plos One, 19, 2024
8KHN
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BU of 8khn by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two cobalt ions
分子名称: COBALT (II) ION, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHO
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BU of 8kho by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two Cobalt ions and Methionine
分子名称: COBALT (II) ION, METHIONINE, Methionine aminopeptidase 1D, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8KHM
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BU of 8khm by Molmil
Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form
分子名称: GLYCEROL, Methionine aminopeptidase 1D, mitochondrial, ...
著者Lee, Y, Lee, E, Hahn, H, Kim, H, Heo, Y, Jang, D.M, Kim, H.J, Kim, H.S.
登録日2023-08-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural insights into N-terminal methionine cleavage by the human mitochondrial methionine aminopeptidase, MetAP1D.
Sci Rep, 13, 2023
8GTI
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BU of 8gti by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C205 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N}-butyl-~{N}-(cyclopropylmethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1, ...
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTM
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BU of 8gtm by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C203 by XFEL
分子名称: 7-(4-bromanyl-2,6-dimethoxy-phenyl)-4,8-dimethyl-~{N},~{N}-bis[4,4,4-tris(fluoranyl)butyl]-1$l^{4},3,5,9-tetrazabicyclo[4.3.0]nona-1(6),2,4,8-tetraen-2-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
8GTG
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BU of 8gtg by Molmil
Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-I-152 by XFEL
分子名称: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N},~{N}-bis(2-methoxyethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine, Endolysin, Isoform CRF-R2 of Corticotropin-releasing factor receptor 1
著者Cho, H.S, Kim, H.
登録日2022-09-08
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser.
Exp.Mol.Med., 55, 2023
7FEP
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BU of 7fep by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 6.5
分子名称: ADEP1, ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FER
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BU of 7fer by Molmil
Cryo-EM structure of BsClpP-ADEP1 complex at pH 4.2
分子名称: ADEP1, ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022
7FES
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BU of 7fes by Molmil
Cryo-EM structure of apo BsClpP at pH 4.2
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Kim, L, Lee, B.-G, Kim, M.K, Kwon, D.H, Kim, H, Brotz-Oesterhelt, H, Roh, S.-H, Song, H.K.
登録日2021-07-21
公開日2022-07-06
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into ClpP protease side exit pore-opening by a pH drop coupled with substrate hydrolysis.
Embo J., 41, 2022

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