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PDB: 492 件

3JUJ
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The crystal structure of apo- UDP-glucose pyrophosphorylase
分子名称: UDP-glucose pyrophosphorylase (GalU)
著者Kim, H, Kim, K.K.
登録日2009-09-15
公開日2010-03-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the reaction mechanism of UDP-glucose pyrophosphorylase
Mol.Cells, 29, 2010
3JUK
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The Crystal Structure of UDP-glucose pyrophosphorylase complexed with UDP-glucose
分子名称: MAGNESIUM ION, UDP-glucose pyrophosphorylase (GalU), URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Kim, H, Kim, K.K.
登録日2009-09-15
公開日2010-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the reaction mechanism of UDP-glucose pyrophosphorylase
Mol.Cells, 29, 2010
5ZHF
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BU of 5zhf by Molmil
Structure of VanYB unbound
分子名称: D-alanyl-D-alanine carboxypeptidase, GLYCEROL, TETRAETHYLENE GLYCOL, ...
著者Kim, H.S, Hahn, H.
登録日2018-03-13
公開日2018-09-05
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
Int. J. Biol. Macromol., 119, 2018
7E72
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Crystal structure of Tie2-agonistic antibody in complex with human Tie2 Fn2-3
分子名称: 1,2-ETHANEDIOL, Angiopoietin-1 receptor, the chimeric Fab fragment of 3H7 (heavy chain), ...
著者Kim, H.M, Jo, G.H, Hong, H.J, Han, A.
登録日2021-02-25
公開日2021-11-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.094 Å)
主引用文献Structural insights into the clustering and activation of Tie2 receptor mediated by Tie2 agonistic antibody.
Nat Commun, 12, 2021
5ZHW
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VanYB in complex with D-Alanine-D-Alanine
分子名称: COPPER (II) ION, D-ALANINE, D-alanyl-D-alanine carboxypeptidase, ...
著者Kim, H.S, Hahn, H.
登録日2018-03-13
公開日2018-09-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
Int. J. Biol. Macromol., 119, 2018
3RFS
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Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
分子名称: Internalin B, repeat modules, Variable lymphocyte receptor B, ...
著者Kim, H.J, Cheong, H.K, Jeon, Y.H.
登録日2011-04-06
公開日2012-03-14
最終更新日2017-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
Proc.Natl.Acad.Sci.USA, 109, 2012
3RFJ
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Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
分子名称: Internalin B, repeat modules, Variable lymphocyte receptor, ...
著者Kim, H.J, Cheong, H.K, Jeon, Y.H.
登録日2011-04-06
公開日2012-03-14
最終更新日2017-08-16
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering
Proc.Natl.Acad.Sci.USA, 109, 2012
3BG4
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BU of 3bg4 by Molmil
The crystal structure of guamerin in complex with chymotrypsin and the development of an elastase-specific inhibitor
分子名称: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
著者Kim, H, Chu, T.T.T, Kim, D.Y, Kim, D.R, Nguyen, C.M.T, Choi, J, Lee, J.R, Hahn, M.J, Kim, K.K.
登録日2007-11-26
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of guamerin in complex with chymotrypsin and the development of an elastase-specific inhibitor.
J.Mol.Biol., 376, 2008
6V88
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Solution NMR structure of Dictyostelium discoideum Skp1A (truncated) dimer
分子名称: SCF ubiquitin ligase complex protein SKP1a
著者Kim, H.W, Eletsky, A, West, C.M.
登録日2019-12-10
公開日2020-04-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Skp1 Dimerization Conceals Its F-Box Protein Binding Site.
Biochemistry, 59, 2020
8J1O
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Crystal structure of HaloTag complexed with BTTA
分子名称: CHLORIDE ION, Haloalkane dehalogenase, N-[[1-[2-[2-(2-hexoxyethoxy)ethoxy]ethyl]-1,2,3-triazol-4-yl]methyl]-1-(1H-1,2,3-triazol-4-yl)-N-(2H-1,2,3-triazol-4-ylmethyl)methanamine, ...
著者Kim, H, Rhee, H, Lee, C.
登録日2023-04-13
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Crystal structure of HaloTag complexed with BTTA
To Be Published
5XEQ
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BU of 5xeq by Molmil
Crystal Structure of human MDGA1 and human neuroligin-2 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MAM domain-containing glycosylphosphatidylinositol anchor protein 1, ...
著者Kim, H.M, Kim, J.A, Kim, D.
登録日2017-04-05
公開日2017-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.136 Å)
主引用文献Structural Insights into Modulation of Neurexin-Neuroligin Trans-synaptic Adhesion by MDGA1/Neuroligin-2 Complex
Neuron, 94, 2017
7WRQ
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BU of 7wrq by Molmil
Structure of Human IGF1/IGFBP3/ALS Ternary Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin-like growth factor-binding protein 3, Insulin-like growth factor-binding protein complex acid labile subunit, ...
著者Kim, H, Fu, Y, Kim, H.M.
登録日2022-01-27
公開日2022-08-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for assembly and disassembly of the IGF/IGFBP/ALS ternary complex
Nat Commun, 13, 2022
1A7K
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BU of 1a7k by Molmil
GLYCOSOMAL GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE IN A MONOCLINIC CRYSTAL FORM
分子名称: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION
著者Kim, H, Hol, W.G.J.
登録日1998-03-16
公開日1998-06-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Leishmania mexicana glycosomal glyceraldehyde-3-phosphate dehydrogenase in a new crystal form confirms the putative physiological active site structure.
J.Mol.Biol., 278, 1998
5C5Z
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BU of 5c5z by Molmil
Crystal structure analysis of c4763, a uropathogenic E. coli-specific protein
分子名称: Glutamyl-tRNA amidotransferase
著者Kim, H, Choi, J, Kim, D, Kim, K.K.
登録日2015-06-22
公開日2015-08-19
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure analysis of c4763, a uropathogenic Escherichia coli-specific protein.
Acta Crystallogr.,Sect.F, 71, 2015
3QY8
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BU of 3qy8 by Molmil
Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases
分子名称: FE (III) ION, GLYCEROL, MAGNESIUM ION, ...
著者Kim, H.S, Lee, S.J, Yoon, H.J, An, D.R, Kim, D.J, Kim, S.-J, Suh, S.W.
登録日2011-03-03
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases.
J.Struct.Biol., 175, 2011
3AXX
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BU of 3axx by Molmil
Functional analysis of hyperthermophilic endocellulase from the Archaeon Pyrococcus horikoshii
分子名称: 458aa long hypothetical endo-1,4-beta-glucanase, PHOSPHATE ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Kim, H.-W, Ishikawa, K.
登録日2011-04-18
公開日2012-02-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Functional analysis of hyperthermophilic endocellulase from Pyrococcus horikoshii by crystallographic snapshots
Biochem.J., 437, 2011
5WY8
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BU of 5wy8 by Molmil
Crystal structure of PTP delta Ig1-Ig3 in complex with IL1RAPL1 Ig1-Ig3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-1 receptor accessory protein-like 1, ...
著者Kim, H.M, Won, S.Y, Kim, D.
登録日2017-01-11
公開日2017-11-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献LAR-RPTP Clustering Is Modulated by Competitive Binding between Synaptic Adhesion Partners and Heparan Sulfate
Front Mol Neurosci, 10, 2017
5GUY
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BU of 5guy by Molmil
Structural and functional study of chuY from E. coli CFT073 strain
分子名称: Uncharacterized protein chuY
著者Kim, H, Choi, J, HA, S.C, Chaurasia, A.K, Kim, D, Kim, K.K.
登録日2016-08-31
公開日2017-03-08
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structural and functional study of ChuY from Escherichia coli strain CFT073
Biochem. Biophys. Res. Commun., 482, 2017
3QY7
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Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases
分子名称: FE (III) ION, MAGNESIUM ION, PHOSPHATE ION, ...
著者Kim, H.S, Lee, S.J, Yoon, H.J, An, D.R, Kim, D.J, Kim, S.-J, Suh, S.W.
登録日2011-03-03
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases.
J.Struct.Biol., 175, 2011
3QY6
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BU of 3qy6 by Molmil
Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases
分子名称: FE (III) ION, MAGNESIUM ION, Tyrosine-protein phosphatase YwqE
著者Kim, H.S, Lee, S.J, Yoon, H.J, An, D.R, Kim, D.J, Kim, S.-J, Suh, S.W.
登録日2011-03-03
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases.
J.Struct.Biol., 175, 2011
4Q6N
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Structural analysis of the tripeptide-bound form of Helicobacter pylori Csd4, a D,L-carboxypeptidase
分子名称: CALCIUM ION, Conserved hypothetical secreted protein, GLYCEROL, ...
著者Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W.
登録日2014-04-23
公開日2014-11-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape
Acta Crystallogr.,Sect.D, 70, 2014
4Q6O
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Structural analysis of the mDAP-bound form of Helicobacter pylori Csd4, a D,L-carboxypeptidase
分子名称: 2,6-DIAMINOPIMELIC ACID, CALCIUM ION, Conserved hypothetical secreted protein, ...
著者Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W.
登録日2014-04-23
公開日2014-11-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape
Acta Crystallogr.,Sect.D, 70, 2014
4Q6P
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Structural analysis of the Zn-form I of Helicobacter pylori Csd4, a D,L-carboxypeptidase
分子名称: 2,6-DIAMINOPIMELIC ACID, CALCIUM ION, Conserved hypothetical secreted protein, ...
著者Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W.
登録日2014-04-23
公開日2014-11-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape
Acta Crystallogr.,Sect.D, 70, 2014
6NBA
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BU of 6nba by Molmil
Crystal structure of Human Cystathionine gamma lyase with S-3-Carboxpropyl-L-Cysteine
分子名称: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine gamma-lyase
著者Kim, H, Yadav, P.K, Banerjee, R, Cho, U.-S.
登録日2018-12-06
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献S-3-Carboxypropyl-l-cysteine specifically inhibits cystathionine gamma-lyase-dependent hydrogen sulfide synthesis.
J.Biol.Chem., 294, 2019
6QIG
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Metalloproteinase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kim, H.J, Emsley, J.
登録日2019-01-18
公開日2019-09-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure and substrate-induced activation of ADAMTS13.
Nat Commun, 10, 2019

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