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PDB: 84 results

3AUI
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BU of 3aui by Molmil
A simplified BPTI variant with poly Glu amino acid tag (C3E) at the C-terminus
Descriptor: Bovine pancreatic trypsin inhibitor, SULFATE ION
Authors:Islam, M.M, Kato, A, Khan, M.M.A, Noguchi, K, Yohda, M, Kidokoro, S.I, Kuroda, Y.
Deposit date:2011-02-03
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Effect of amino acid mutations on protein's solubility, function and structure characterized using short poly amino acid peptide tags
To be Published
3AUC
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BU of 3auc by Molmil
A simplified BPTI variant with poly SER (C5S) amino acid tag at the c-terminus
Descriptor: Bovine pancreatic trypsin inhibitor, SULFATE ION
Authors:Islam, M.M, Kato, A, Khan, M.M.A, Noguchi, K, Yohda, M, Kidokoro, S.I, Kuroda, Y.
Deposit date:2011-02-03
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Effect of amino acid mutations on protein's solubility, function and structure characterized using short poly amino acid peptide tags
To be Published
3AUH
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BU of 3auh by Molmil
A simplified BPTI variant with poly Arg amino acid tag (C3R) at the C-terminus
Descriptor: Bovine pancreatic trypsin inhibitor, SULFATE ION
Authors:Islam, M.M, Kato, A, Khan, M.M.A, Noguchi, K, Yohda, M, Kidokoro, S.I, Kuroda, Y.
Deposit date:2011-02-03
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Effect of amino acid mutations on protein's solubility, function and structure characterized using short poly amino acid peptide tags
To be Published
3AUE
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BU of 3aue by Molmil
A simplified BPTI variant with poly His amino acid tag (C5H) at the C-terminus
Descriptor: Bovine pancreatic trypsin inhibitor, SULFATE ION
Authors:Islam, M.M, Kato, A, Khan, M.M.A, Noguchi, K, Yohda, M, Kidokoro, S.I, Kuroda, Y.
Deposit date:2011-02-03
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Effect of amino acid mutations on protein's solubility, function and structure characterized using short poly amino acid peptide tags
To be Published
6OFQ
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BU of 6ofq by Molmil
ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori in complex with peptide STSA
Descriptor: Heme-binding protein A / AI-2 binding protein A, SER-THR-SER-ALA
Authors:Rahman, M.M, Machuca, M.A, Khan, M.F, Barlow, C.K, Schittenhelm, R.B, Roujeinikova, A.
Deposit date:2019-03-31
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular Basis of Unexpected Specificity of ABC Transporter-Associated Substrate-Binding Protein DppA from Helicobacter pylori.
J.Bacteriol., 201, 2019
2LMA
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BU of 2lma by Molmil
Solution structure of CD4+ T cell derived peptide Thp5
Descriptor: Thp5 peptide
Authors:Pandey, N.K, Khan, M.M, Chatterjee, S, Dwivedi, V.P, Tousif, S, Das, J, Van Kaer, L.
Deposit date:2011-11-29
Release date:2011-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:CD4+ T cell derived novel peptide Thp5 induces IL-4 production in CD4+ T cells to direct T helper 2 cell differentiation
J.Biol.Chem., 2011
6Q0G
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BU of 6q0g by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-proline
Descriptor: CHLORIDE ION, PROLINE, Putative methyl-accepting chemotaxis protein
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-08-01
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
6PY3
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BU of 6py3 by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-isoleucine
Descriptor: ISOLEUCINE, Putative methyl-accepting chemotaxis protein
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-07-28
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
6PXY
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BU of 6pxy by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-alanine
Descriptor: ALANINE, Putative methyl-accepting chemotaxis protein
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-07-28
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
6PY4
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BU of 6py4 by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-leucine
Descriptor: LEUCINE, Putative methyl-accepting chemotaxis protein
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-07-29
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
6PY5
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BU of 6py5 by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-serine
Descriptor: Putative methyl-accepting chemotaxis protein, SERINE
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-07-29
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
6PYI
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BU of 6pyi by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA
Descriptor: ALANINE, Putative methyl-accepting chemotaxis protein
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-07-29
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
6Q0F
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BU of 6q0f by Molmil
Crystal structure of ligand-binding domain of Pseudomonas fluorescens chemoreceptor CtaA in complex with L-valine
Descriptor: CHLORIDE ION, Putative methyl-accepting chemotaxis protein, SODIUM ION, ...
Authors:Ud-Din, I.A, Khan, M.F, Roujeinikova, A.
Deposit date:2019-08-01
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Broad Specificity of Amino Acid Chemoreceptor CtaA ofPseudomonas fluorescensIs Afforded by Plasticity of Its Amphipathic Ligand-Binding Pocket.
Mol.Plant Microbe Interact., 33, 2020
4L1M
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BU of 4l1m by Molmil
Structure of the first RCC1-like domain of HERC2
Descriptor: E3 ubiquitin-protein ligase HERC2, SULFATE ION, UNKNOWN ATOM OR ION
Authors:Tempel, W, Khan, M.B, Dong, A, Hu, J, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2013-06-03
Release date:2013-07-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the first RCC1-like domain of HERC2
TO BE PUBLISHED
7V5Y
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BU of 7v5y by Molmil
Crystal structure of hexameric complex of Sa2YoeB-Sa2YefM toxin-antitoxin from Staphylococcus aureus
Descriptor: Antitoxin, Putative mRNA interferase YoeB
Authors:Xue, L, Khan, M.H, Yue, J.
Deposit date:2021-08-18
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The two paralogous copies of the YoeB-YefM toxin-antitoxin module in Staphylococcus aureus differ in DNA binding and recognition patterns.
J.Biol.Chem., 298, 2022
7V5Z
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BU of 7v5z by Molmil
Crystal structure of heterotetrameric complex of Sa2YoeB-Sa2YefM toxin-antitoxin from Staphylococcus aureus
Descriptor: Antitoxin, Putative mRNA interferase YoeB
Authors:Xue, L, Khan, M.H, Yue, J.
Deposit date:2021-08-18
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The two paralogous copies of the YoeB-YefM toxin-antitoxin module in Staphylococcus aureus differ in DNA binding and recognition patterns.
J.Biol.Chem., 298, 2022
6SL3
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BU of 6sl3 by Molmil
ALPHA-ACTININ FROM ENTAMOEBA HISTOLYTICA in orthorhombic space group
Descriptor: CALCIUM ION, Calponin homology domain protein putative
Authors:Pinotsis, N, Khan, M.B, Djinovic-Carugo, K.
Deposit date:2019-08-18
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Calcium modulates the domain flexibility and function of an alpha-actinin similar to the ancestral alpha-actinin.
Proc.Natl.Acad.Sci.USA, 117, 2020
6SL2
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BU of 6sl2 by Molmil
ALPHA-ACTININ FROM ENTAMOEBA HISTOLYTICA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Calponin homology domain protein putative, ...
Authors:Pinotsis, N, Khan, M.B, Djinovic-Carugo, K.
Deposit date:2019-08-18
Release date:2020-08-26
Last modified:2020-11-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Calcium modulates the domain flexibility and function of an alpha-actinin similar to the ancestral alpha-actinin.
Proc.Natl.Acad.Sci.USA, 117, 2020
8DI3
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BU of 8di3 by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-06-28
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DKK
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BU of 8dkk by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-07-05
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DKH
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BU of 8dkh by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-07-05
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DKJ
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BU of 8dkj by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-07-05
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DKL
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BU of 8dkl by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-07-05
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DMN
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BU of 8dmn by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-07-08
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8EJ9
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BU of 8ej9 by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
Descriptor: 3C-like proteinase nsp5
Authors:Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
Deposit date:2022-09-16
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023

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PDB entries from 2024-07-17

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