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PDB: 57 results

4WEB
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BU of 4web by Molmil
Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMAMIDE, Mouse Fab Heavy Chain, ...
Authors:Khan, A.G, Whidby, J, Miller, M.T, Scarborough, H, Zatorski, A.V, Cygan, A, Price, A.A, Yost, S.A, Bohannon, C.D, Jacob, J, Grakoui, A, Marcotrigiano, J.
Deposit date:2014-09-09
Release date:2014-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the core ectodomain of the hepatitis C virus envelope glycoprotein 2.
Nature, 509, 2014
7N0Z
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BU of 7n0z by Molmil
Structure of PPM1H phosphatase with manganese ions at the active site
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, Protein phosphatase 1H
Authors:Khan, A.R, Waschbusch, D.
Deposit date:2021-05-26
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural basis for the specificity of PPM1H phosphatase for Rab GTPases.
Embo Rep., 22, 2021
6ETC
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BU of 6etc by Molmil
Crystal Structure of Human gamma-D-crystallin Mutant P23T+R36S at 1.2 Angstroms Resolution
Descriptor: Gamma-crystallin D
Authors:Khan, A.R, McManus, J.
Deposit date:2017-10-26
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.197 Å)
Cite:Temperature-Dependent Interactions Explain Normal and Inverted Solubility in a gamma D-Crystallin Mutant.
Biophys.J., 117, 2019
6FF8
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BU of 6ff8 by Molmil
Crystal structure of uncomplexed Rab32 in the active GTP-bound state at 2.13 Angstrom resolution
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-32
Authors:Khan, A.R, Kecman, T.
Deposit date:2018-01-04
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:LRRK2 binds to the Rab32 subfamily in a GTP-dependent mannerviaits armadillo domain.
Small GTPases, 2019
1DUZ
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BU of 1duz by Molmil
HUMAN CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A 0201) IN COMPLEX WITH A NONAMERIC PEPTIDE FROM HTLV-1 TAX PROTEIN
Descriptor: BETA-2 MICROGLOBULIN, HLA-A*0201, HTLV-1 OCTAMERIC TAX PEPTIDE
Authors:Khan, A.R, Baker, B.M, Ghosh, P, Biddison, W.E, Wiley, D.C.
Deposit date:2000-01-19
Release date:2000-02-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure and stability of an HLA-A*0201/octameric tax peptide complex with an empty conserved peptide-N-terminal binding site.
J.Immunol., 164, 2000
2GZD
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BU of 2gzd by Molmil
Crystal Structure of Rab11 in Complex with Rab11-FIP2
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rab11 family-interacting protein 2, ...
Authors:Khan, A.R.
Deposit date:2006-05-11
Release date:2006-08-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structure of rab11 in complex with rab11 family interacting protein 2.
Structure, 14, 2006
2GZH
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BU of 2gzh by Molmil
Crystal Structure of Rab11 in Complex with Rab11-Family Interacting Protein 2
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Khan, A.R.
Deposit date:2006-05-11
Release date:2006-08-15
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of rab11 in complex with rab11 family interacting protein 2.
Structure, 14, 2006
1BXO
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BU of 1bxo by Molmil
ACID PROTEINASE (PENICILLOPEPSIN) (E.C.3.4.23.20) COMPLEX WITH PHOSPHONATE INHIBITOR: METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUT YL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL) PHENYLPROPANOATE
Descriptor: GLYCEROL, METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL]HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE, PROTEIN (PENICILLOPEPSIN), ...
Authors:Khan, A.R, Parrish, J.C, Fraser, M.E, Smith, W.W, Bartlett, P.A, James, M.N.G.
Deposit date:1998-10-07
Release date:1998-10-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Lowering the entropic barrier for binding conformationally flexible inhibitors to enzymes.
Biochemistry, 37, 1998
1DUY
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BU of 1duy by Molmil
CRYSTAL STRUCTURE OF HLA-A*0201/OCTAMERIC TAX PEPTIDE COMPLEX
Descriptor: BETA-2 MICROGLOBULIN, HLA-A2*0201, HTLV-1 OCTAMERIC TAX PEPTIDE
Authors:Khan, A.R, Baker, B.M, Ghosh, P, Biddison, W.E, Wiley, D.C.
Deposit date:2000-01-19
Release date:2000-02-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure and stability of an HLA-A*0201/octameric tax peptide complex with an empty conserved peptide-N-terminal binding site.
J.Immunol., 164, 2000
6SQ2
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BU of 6sq2 by Molmil
Structure of a phosphomimetic switch 2 variant of Rab8a in complex with the phospho-Rab binding domain of RILPL2
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RILP-like protein 2, ...
Authors:Khan, A.R, Waschbusch, D.
Deposit date:2019-09-03
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.684 Å)
Cite:Structure of a phosphomimetic switch 2 variant of Rab8a in complex with the phospho-Rab binding domain of RILPL2
To Be Published
1AVF
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BU of 1avf by Molmil
ACTIVATION INTERMEDIATE 2 OF HUMAN GASTRICSIN FROM HUMAN STOMACH
Descriptor: GASTRICSIN, SODIUM ION
Authors:Khan, A.R, Cherney, M.M, Tarasova, N.I, James, M.N.G.
Deposit date:1997-09-16
Release date:1998-02-25
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural characterization of activation 'intermediate 2' on the pathway to human gastricsin.
Nat.Struct.Biol., 4, 1997
6HH2
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BU of 6hh2 by Molmil
Rab29 small GTPase bound to GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-7L1
Authors:Khan, A.R, McGrath, E, Waschbusch, D.
Deposit date:2018-08-24
Release date:2019-09-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:LRRK2 binds to the Rab32 subfamily in a GTP-dependent mannerviaits armadillo domain.
Small GTPases, 2019
6UVS
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BU of 6uvs by Molmil
Human Connexin-26 (Low pH open conformation)
Descriptor: Gap junction beta-2 protein
Authors:Khan, A.K, Jagielnicki, M, Purdy, M.D, Yeager, M.
Deposit date:2019-11-04
Release date:2020-04-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:A Steric "Ball-and-Chain" Mechanism for pH-Mediated Regulation of Gap Junction Channels.
Cell Rep, 31, 2020
6UVR
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BU of 6uvr by Molmil
Human Connexin-26 (Neutral pH open conformation)
Descriptor: Gap junction beta-2 protein
Authors:Khan, A.K, Jagielnicki, M, Purdy, M.D, Yeager, M.
Deposit date:2019-11-04
Release date:2020-04-29
Last modified:2020-05-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:A Steric "Ball-and-Chain" Mechanism for pH-Mediated Regulation of Gap Junction Channels.
Cell Rep, 31, 2020
6UVT
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BU of 6uvt by Molmil
Human Connexin-26 (Low pH closed conformation)
Descriptor: Gap junction beta-2 protein
Authors:Khan, A.K, Jagielnicki, M, Purdy, M.D, Yeager, M.
Deposit date:2019-11-04
Release date:2020-04-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:A Steric 'Ball-and-Chain' Mechanism for pH-Mediated Regulation of Gap Junction Channels
Cell Rep, 31, 2020
7KPR
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BU of 7kpr by Molmil
Structure of wild-type PPM1H phosphatase at 3.1 Angstrom resolution
Descriptor: MAGNESIUM ION, Protein phosphatase 1H
Authors:Khan, A.R, Waschbusch, D.
Deposit date:2020-11-12
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structural basis for the specificity of PPM1H phosphatase for Rab GTPases.
Embo Rep., 22, 2021
7L4I
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BU of 7l4i by Molmil
Crystal structure of a substrate-trapping variant of PPM1H phosphatase
Descriptor: MAGNESIUM ION, Protein phosphatase 1H
Authors:Khan, A.R, Waschbusch, D.
Deposit date:2020-12-19
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural basis for the specificity of PPM1H phosphatase for Rab GTPases.
Embo Rep., 22, 2021
7L4J
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BU of 7l4j by Molmil
Crystal structure of WT PPM1H phosphatase
Descriptor: MAGNESIUM ION, Protein phosphatase 1H
Authors:Khan, A.R, Waschbusch, D.
Deposit date:2020-12-19
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:Structural basis for the specificity of PPM1H phosphatase for Rab GTPases.
Embo Rep., 22, 2021
8RQU
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BU of 8rqu by Molmil
Structure of TEM1 beta-lactamase variant 70.a
Descriptor: Beta-lactamase TEM-1, MAGNESIUM ION
Authors:Napie, E, Fram, B.F, Gauthier, N.P, Sander, C, Khan, A.R.
Deposit date:2024-01-19
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Simultaneous enhancement of multiple functional properties using evolution-informed protein design.
Biorxiv, 2023
8OQH
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BU of 8oqh by Molmil
Structure of the cytosolic domain of lysosome-associated TMEM55B
Descriptor: Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase, ZINC ION
Authors:Waschbusch, D, Khan, A.R.
Deposit date:2023-04-12
Release date:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of the cytosolic domain of lysosome-associated TMEM55B
To be published
7N99
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BU of 7n99 by Molmil
SDE2 SAP domain apo structure
Descriptor: Isoform 2 of Replication stress response regulator SDE2
Authors:Paung, Y, Weinheimer, A.S, Rageul, J, Khan, A, Ho, B, Tong, M, Alphonse, S, Seeliger, M.A, Kim, H.
Deposit date:2021-06-17
Release date:2022-10-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks.
J.Biol.Chem., 298, 2022
7P53
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BU of 7p53 by Molmil
Crystal Structure of Human gamma-D-crystallin mutant C110M at 1.57 Angstroms resolution
Descriptor: Gamma-crystallin D
Authors:Strofaldi, A, Khan, A.R, McManus, J.
Deposit date:2021-07-14
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Surface Exposed Free Cysteine Suppresses Crystallization of Human gamma D-Crystallin.
J.Mol.Biol., 433, 2021
3CWZ
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BU of 3cwz by Molmil
Structure of RAB6(GTP)-R6IP1 complex
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rab6-interacting protein 1, ...
Authors:Recacha, R, Houdusse, A, Goud, B, Khan, A.R.
Deposit date:2008-04-23
Release date:2008-11-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for recruitment of Rab6-interacting protein 1 to Golgi via a RUN domain.
Structure, 17, 2009
8GII
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BU of 8gii by Molmil
TEM-1 Beta Lactamase Variant 80.a
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, TEM-1 Variant 80.a
Authors:Fram, B.F, Gauthier, N.P, Khan, A.R, Sander, C.
Deposit date:2023-03-14
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Simultaneous enhancement of multiple functional properties using evolution-informed protein design
To Be Published
8GIJ
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BU of 8gij by Molmil
TEM-1 Beta Lactamase Variant 80.b
Descriptor: TEM-1 Beta Lactmase Variant 80.b
Authors:Fram, B.F, Gauthier, N.P, Khan, A, Sander, C.
Deposit date:2023-03-14
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Simultaneous enhancement of multiple functional properties using evolution-informed protein design
To be published

 

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