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PDB: 214 results

3HVS
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BU of 3hvs by Molmil
Escherichia coli Thiol peroxidase (Tpx) wild type disulfide form
Descriptor: CITRIC ACID, Thiol peroxidase
Authors:Hall, A, Karplus, P.A.
Deposit date:2009-06-16
Release date:2009-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural changes common to catalysis in the Tpx peroxiredoxin subfamily.
J.Mol.Biol., 393, 2009
2GMF
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BU of 2gmf by Molmil
HUMAN GRANULOCYTE MACROPHAGE COLONY STIMULATING FACTOR
Descriptor: GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR
Authors:Rozwarski, D, Diederichs, K, Hecht, R, Boone, T, Karplus, P.A.
Deposit date:1996-04-24
Release date:1996-11-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Refined crystal structure and mutagenesis of human granulocyte-macrophage colony-stimulating factor.
Proteins, 26, 1996
4G2E
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BU of 4g2e by Molmil
Crystal structure of a dimeric PrxQ from Sulfolobus tokodaii
Descriptor: Peroxiredoxin
Authors:Perkins, A, Gretes, M.C, Karplus, P.A.
Deposit date:2012-07-11
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mapping the Active Site Helix-to-Strand Conversion of CxxxxC Peroxiredoxin Q Enzymes.
Biochemistry, 51, 2012
4GQF
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Aeropyrum pernix Peroxiredoxin Q Enzyme in the Locally Unfolded Conformation
Descriptor: GLYCEROL, SULFATE ION, Thiol peroxidase
Authors:Perkins, A, Karplus, P.A, Gretes, M.C, Nelson, K.J, Poole, L.B.
Deposit date:2012-08-22
Release date:2012-10-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mapping the Active Site Helix-to-Strand Conversion of CxxxxC Peroxiredoxin Q Enzymes.
Biochemistry, 51, 2012
4GQC
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BU of 4gqc by Molmil
Crystal Structure of Aeropyrum pernix Peroxiredoxin Q Enzyme in Fully-Folded and Locally-Unfolded Conformations
Descriptor: DITHIANE DIOL, GLYCEROL, SULFATE ION, ...
Authors:Perkins, A, Karplus, P.A, Gretes, M.C, Nelson, K.J, Poole, L.B.
Deposit date:2012-08-22
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mapping the Active Site Helix-to-Strand Conversion of CxxxxC Peroxiredoxin Q Enzymes.
Biochemistry, 51, 2012
1TML
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BU of 1tml by Molmil
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE
Descriptor: ENDO-1,4-BETA-D-GLUCANASE, SULFATE ION
Authors:Spezio, M, Wilson, D.B, Karplus, P.A.
Deposit date:1993-06-08
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the catalytic domain of a thermophilic endocellulase.
Biochemistry, 32, 1993
1ETE
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BU of 1ete by Molmil
CRYSTAL STRUCTURE OF THE FLT3 LIGAND
Descriptor: FLT3 LIGAND, ZINC ION
Authors:Savvides, S.N, Boone, T, Karplus, P.A.
Deposit date:2000-04-12
Release date:2000-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Flt3 ligand structure and unexpected commonalities of helical bundles and cystine knots.
Nat.Struct.Biol., 7, 2000
1KRA
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BU of 1kra by Molmil
CRYSTAL STRUCTURE OF KLEBSIELLA AEROGENES UREASE, ITS APOENZYME AND TWO ACTIVE SITE MUTANTS
Descriptor: UREASE
Authors:Jabri, E, Karplus, P.A.
Deposit date:1995-06-20
Release date:1995-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the Klebsiella aerogenes urease apoenzyme and two active-site mutants.
Biochemistry, 35, 1996
1KRC
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BU of 1krc by Molmil
CRYSTAL STRUCTURE OF KLEBSIELLA AEROGENES UREASE, ITS APOENZYME AND TWO ACTIVE SITE MUTANTS
Descriptor: CARBON DIOXIDE, NICKEL (II) ION, UREASE
Authors:Jabri, E, Karplus, P.A.
Deposit date:1995-06-20
Release date:1995-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the Klebsiella aerogenes urease apoenzyme and two active-site mutants.
Biochemistry, 35, 1996
1KRB
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BU of 1krb by Molmil
CRYSTAL STRUCTURE OF KLEBSIELLA AEROGENES UREASE, ITS APOENZYME AND TWO ACTIVE SITE MUTANTS
Descriptor: NICKEL (II) ION, UREASE
Authors:Jabri, E, Karplus, P.A.
Deposit date:1995-06-20
Release date:1995-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the Klebsiella aerogenes urease apoenzyme and two active-site mutants.
Biochemistry, 35, 1996
2R27
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BU of 2r27 by Molmil
Constitutively zinc-deficient mutant of human superoxide dismutase (SOD), C6A, H80S, H83S, C111S
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn]
Authors:Roberts, B.R, Getzoff, E.D, Karplus, P.A, Beckman, J.S, Tainer, J.A.
Deposit date:2007-08-24
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of zinc-deficient human superoxide dismutase and implications for ALS.
J.Mol.Biol., 373, 2007
2P2T
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BU of 2p2t by Molmil
Crystal structure of dynein light chain LC8 bound to residues 123-138 of intermediate chain IC74
Descriptor: ACETATE ION, Dynein intermediate chain peptide, Dynein light chain 1, ...
Authors:Benison, G, Karplus, P.A, Barbar, E.
Deposit date:2007-03-07
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and dynamics of LC8 complexes with KXTQT-motif peptides: swallow and dynein intermediate chain compete for a common site.
J.Mol.Biol., 371, 2007
2RGO
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BU of 2rgo by Molmil
Structure of Alpha-Glycerophosphate Oxidase from Streptococcus sp.: A Template for the Mitochondrial Alpha-Glycerophosphate Dehydrogenase
Descriptor: Alpha-Glycerophosphate Oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Colussi, T, Boles, W, Mallett, T.C, Karplus, P.A, Claiborne, A.
Deposit date:2007-10-04
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of alpha-glycerophosphate oxidase from Streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase.
Biochemistry, 47, 2008
2RGH
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BU of 2rgh by Molmil
Structure of Alpha-Glycerophosphate Oxidase from Streptococcus sp.: A Template for the Mitochondrial Alpha-Glycerophosphate Dehydrogenase
Descriptor: Alpha-Glycerophosphate Oxidase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Colussi, T, Boles, W, Mallett, T.C, Karplus, P.A, Claiborne, A.
Deposit date:2007-10-01
Release date:2008-01-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of alpha-glycerophosphate oxidase from Streptococcus sp.: a template for the mitochondrial alpha-glycerophosphate dehydrogenase.
Biochemistry, 47, 2008
3E2B
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BU of 3e2b by Molmil
Crystal structure of Dynein Light chain LC8 in complex with a peptide derived from Swallow
Descriptor: ACETATE ION, Dynein light chain 1, cytoplasmic, ...
Authors:Benison, G, Barbar, E, Karplus, P.A.
Deposit date:2008-08-05
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:The interplay of ligand binding and quaternary structure in the diverse interactions of dynein light chain LC8.
J.Mol.Biol., 384, 2008
1A5O
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BU of 1a5o by Molmil
K217C VARIANT OF KLEBSIELLA AEROGENES UREASE, CHEMICALLY RESCUED BY FORMATE AND NICKEL
Descriptor: FORMIC ACID, NICKEL (II) ION, UREASE (ALPHA SUBUNIT), ...
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
1A5N
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BU of 1a5n by Molmil
K217A VARIANT OF KLEBSIELLA AEROGENES UREASE, CHEMICALLY RESCUED BY FORMATE AND NICKEL
Descriptor: FORMIC ACID, NICKEL (II) ION, UREASE (ALPHA SUBUNIT), ...
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
1A5K
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BU of 1a5k by Molmil
K217E VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
1A5L
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BU of 1a5l by Molmil
K217C VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
1A5M
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BU of 1a5m by Molmil
K217A VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
3QHC
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BU of 3qhc by Molmil
Crystal structure of Symerythrin from Cyanophora paradoxa, reduced with dithionite
Descriptor: FE (III) ION, Symerythrin
Authors:Cooley, R.B, Arp, D.J, Karplus, P.A.
Deposit date:2011-01-25
Release date:2011-08-31
Last modified:2011-10-12
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Symerythrin structures at atomic resolution and the origins of rubrerythrins and the ferritin-like superfamily.
J.Mol.Biol., 413, 2011
3QHB
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BU of 3qhb by Molmil
Crystal structure of oxidized Symerythrin from Cyanophora paradoxa
Descriptor: FE (III) ION, Symerythrin
Authors:Cooley, R.B, Arp, D.J, Karplus, P.A.
Deposit date:2011-01-25
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A diiron protein autogenerates a valine-phenylalanine cross-link.
Science, 332, 2011
3QGA
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BU of 3qga by Molmil
3.0 A Model of Iron Containing Urease UreA2B2 from Helicobacter mustelae
Descriptor: FE (III) ION, Fusion of urease beta and gamma subunits, Urease subunit beta 2
Authors:Tronrud, D.E, Robbins, A, Karplus, P.A.
Deposit date:2011-01-24
Release date:2011-08-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Iron-containing urease in a pathogenic bacterium.
Proc.Natl.Acad.Sci.USA, 108, 2011
3QGK
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3.0 A Model of Iron Containing Urease UreA2B2 from Helicobacter mustelae (refined w/ no ordered solvent)
Descriptor: FE (III) ION, Fusion of urease beta and gamma subunits, Urease subunit beta 2
Authors:Tronrud, D.E, Robbins, A, Karplus, P.A.
Deposit date:2011-01-24
Release date:2011-08-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Iron-containing urease in a pathogenic bacterium.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SID
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BU of 3sid by Molmil
Crystal structure of oxidized Symerythrin from Cyanophora paradoxa, azide adduct at 50% occupancy
Descriptor: AZIDE ION, FE (III) ION, Symerythrin
Authors:Cooley, R.B, Arp, D.J, Karplus, P.A.
Deposit date:2011-06-17
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Symerythrin structures at atomic resolution and the origins of rubrerythrins and the ferritin-like superfamily.
J.Mol.Biol., 413, 2011

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