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PDB: 184 件

3A4F
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Crystal Structure of Human Transthyretin (E54K)
分子名称: GLYCEROL, SULFATE ION, Transthyretin
著者Miyata, M, Sato, T, Nakamura, T, Ikemizu, S, Yamagata, Y, Kai, H.
登録日2009-07-06
公開日2009-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Role of the glutamic acid 54 residue in transthyretin stability and thyroxine binding
Biochemistry, 49, 2010
3A4E
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Crystal structure of Human Transthyretin (E54G)
分子名称: GLYCEROL, SULFATE ION, Transthyretin
著者Miyata, M, Sato, T, Nakamura, T, Ikemizu, S, Yamagata, Y, Kai, H.
登録日2009-07-06
公開日2009-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Role of the glutamic acid 54 residue in transthyretin stability and thyroxine binding
Biochemistry, 49, 2010
3A5P
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Crystal structure of hemagglutinin
分子名称: Haemagglutinin I
著者Watanabe, N, Sakai, N, Nakamura, T, Nabeshima, Y, Kouno, T, Mizuguchi, M, Kawano, K.
登録日2009-08-10
公開日2010-08-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献The Structure of Physarum polycephalum hemagglutinin I suggests a minimal carbohydrate recognition domain of legume lectin fold
J.Mol.Biol., 405, 2011
5XDH
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BU of 5xdh by Molmil
His/DOPA ligated cytochrome c from an anammox organism KSU-1
分子名称: ACETATE ION, HEME C, Putative cytochrome c, ...
著者Hira, D, Kitamura, R, Nakamura, T, Yamagata, Y, Furukawa, K, Fujii, T.
登録日2017-03-28
公開日2018-03-28
最終更新日2019-10-02
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Anammox Organism KSU-1 Expresses a Novel His/DOPA Ligated Cytochrome c.
J. Mol. Biol., 430, 2018
7Y51
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Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis TTE0866 delta100 mutant
分子名称: GLYCEROL, NICKEL (II) ION, Predicted xylanase/chitin deacetylase
著者Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nakamura, T, Nishiya, Y.
登録日2022-06-16
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Functional analysis of the N-terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.
Febs Open Bio, 12, 2022
3APU
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BU of 3apu by Molmil
Crystal structure of the A variant of human alpha1-acid glycoprotein
分子名称: Alpha-1-acid glycoprotein 2, TETRAETHYLENE GLYCOL
著者Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
登録日2010-10-21
公開日2011-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
6KRP
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Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys W88A mutant
分子名称: CITRIC ACID, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2019-08-22
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRK
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Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys mutant
分子名称: CITRIC ACID, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2019-08-22
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6KRQ
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Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys F80A mutant
分子名称: CITRIC ACID, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2019-08-22
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6L0R
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BU of 6l0r by Molmil
Crystal Structure of the O-Phosphoserine Sulfhydrylase from Aeropyrum pernix Complexed with O-Acetylserine
分子名称: (2S)-3-acetyloxy-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]propanoic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Protein CysO
著者Nakabayashi, M, Takeda, E, Ishikawa, K, Nakamura, T.
登録日2019-09-26
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Identification of amino acid residues important for recognition of O-phospho-l-serine substrates by cysteine synthase.
J.Biosci.Bioeng., 131, 2021
6KRM
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Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys F46A mutant
分子名称: CITRIC ACID, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2019-08-22
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6L0S
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BU of 6l0s by Molmil
Crystal Structure of the O-Phosphoserine Sulfhydrylase from Aeropyrum pernix Complexed with L-Cysteine
分子名称: (2R)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-propanoic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Protein CysO
著者Nakabayashi, M, Takeda, E, Ishikawa, K, Nakamura, T.
登録日2019-09-26
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Identification of amino acid residues important for recognition of O-phospho-l-serine substrates by cysteine synthase.
J.Biosci.Bioeng., 131, 2021
6KRS
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Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) 0Cys W211A mutant
分子名称: CITRIC ACID, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2019-08-22
公開日2020-07-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.
Protein Sci., 29, 2020
6L0Q
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BU of 6l0q by Molmil
Crystal Structure of the O-Phosphoserine Sulfhydrylase from Aeropyrum pernix Complexed with O-Phosphoserine
分子名称: (2S)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-phosphonooxy-propanoic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Protein CysO
著者Nakabayashi, M, Takeda, E, Ishikawa, K, Nakamura, T.
登録日2019-09-26
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Identification of amino acid residues important for recognition of O-phospho-l-serine substrates by cysteine synthase.
J.Biosci.Bioeng., 131, 2021
6L0P
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BU of 6l0p by Molmil
Crystal Structure of the O-Phosphoserine Sulfhydrylase from Aeropyrum pernix Complexed with O-Phosphoserine
分子名称: (2S)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-phosphonooxy-propanoic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Protein CysO
著者Nakabayashi, M, Takeda, E, Ishikawa, K, Nakamura, T.
登録日2019-09-26
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Identification of amino acid residues important for recognition of O-phospho-l-serine substrates by cysteine synthase.
J.Biosci.Bioeng., 131, 2021
6M5Y
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BU of 6m5y by Molmil
Structure of human galectin-1 tandem-repeat mutant with lactose
分子名称: Galectin-1,Galectin-1, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Nonaka, Y, Kamitori, S, Nakamura, T.
登録日2020-03-12
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Crystal structure and conformational stability of a galectin-1 tandem-repeat mutant with a short linker.
Glycobiology, 2021
3APV
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BU of 3apv by Molmil
Crystal structure of the A variant of human alpha1-acid glycoprotein and amitriptyline complex
分子名称: ACETIC ACID, Alpha-1-acid glycoprotein 2, Amitriptyline
著者Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
登録日2010-10-21
公開日2011-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
3APX
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Crystal structure of the A variant of human alpha1-acid glycoprotein and chlorpromazine complex
分子名称: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, ACETIC ACID, Alpha-1-acid glycoprotein 2
著者Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
登録日2010-10-21
公開日2011-02-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
2ZHK
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BU of 2zhk by Molmil
Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine dimer (crystal 1)
分子名称: Galectin-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Nagae, M, Nishi, N, Murata, T, Usui, T, Nakamura, T, Wakatsuki, S, Kato, R.
登録日2008-02-06
公開日2008-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain.
Glycobiology, 19, 2009
2ZHL
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Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine dimer (crystal 2)
分子名称: Galectin-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Nagae, M, Nishi, N, Murata, T, Usui, T, Nakamura, T, Wakatsuki, S, Kato, R.
登録日2008-02-06
公開日2008-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain.
Glycobiology, 19, 2009
3APW
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BU of 3apw by Molmil
Crystal structure of the A variant of human alpha1-acid glycoprotein and disopyramide complex
分子名称: Alpha-1-acid glycoprotein 2, Disopyramide
著者Nishi, K, Ono, T, Nakamura, T, Fukunaga, N, Izumi, M, Watanabe, H, Suenaga, A, Maruyama, T, Yamagata, Y, Curry, S, Otagiri, M.
登録日2010-10-21
公開日2011-02-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into differences in drug-binding selectivity between two forms of human alpha1-acid glycoprotein genetic variants, the A and F1*S forms.
J. Biol. Chem., 286, 2011
2ZHM
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BU of 2zhm by Molmil
Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 1)
分子名称: (R)-1-PARA-NITRO-PHENYL-2-AZIDO-ETHANOL, Galectin-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nagae, M, Nishi, N, Murata, T, Usui, T, Nakamura, T, Wakatsuki, S, Kato, R.
登録日2008-02-06
公開日2008-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain.
Glycobiology, 19, 2009
7FBW
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Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
分子名称: NICKEL (II) ION, Predicted xylanase/chitin deacetylase
著者Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nishiya, Y, Nakamura, T.
登録日2021-07-13
公開日2021-10-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.
Acta Crystallogr.,Sect.F, 77, 2021
2ZHN
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Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 2)
分子名称: (R)-1-PARA-NITRO-PHENYL-2-AZIDO-ETHANOL, GALECTIN-9, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Nagae, M, Nishi, N, Murata, T, Usui, T, Nakamura, T, Wakatsuki, S, Kato, R.
登録日2008-02-06
公開日2008-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural analysis of the recognition mechanism of poly-N-acetyllactosamine by the human galectin-9 N-terminal carbohydrate recognition domain.
Glycobiology, 19, 2009
7C87
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Peroxiredoxin from Aeropyrum pernix K1 (ApPrx) C50S/F80C/C207S/C213S mutant (ApPrx*F80C)
分子名称: CITRIC ACID, Peroxiredoxin
著者Himiyama, T, Nakamura, T.
登録日2020-05-29
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rebuilding Ring-Type Assembly of Peroxiredoxin by Chemical Modification.
Bioconjug.Chem., 32, 2021

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