2ZZI
 
 | | Crystal structure of TTHA1623 in a di-iron-bound form | | 分子名称: | ACETATE ION, FE (III) ION, Metallo-beta-lactamase superfamily protein | | 著者 | Yamamura, A, Okada, A, Kameda, Y, Ohtsuka, J, Nakagawa, N, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M. | | 登録日 | 2009-02-16 | | 公開日 | 2010-01-05 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Structure of TTHA1623, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8
Acta Crystallogr.,Sect.F, 65, 2009
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3AUO
 | | DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP | | 分子名称: | 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ... | | 著者 | Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2011-02-11 | | 公開日 | 2012-01-25 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
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3B0Y
 | | K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP | | 分子名称: | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ... | | 著者 | Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2011-06-17 | | 公開日 | 2012-05-02 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | | 主引用文献 | The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
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2GS9
 | | Crystal structure of TT1324 from Thermus thermophilis HB8 | | 分子名称: | FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE | | 著者 | Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-04-25 | | 公開日 | 2007-03-13 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
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2CWW
 | | Crystal structure of Thermus thermophilus TTHA1280, a putative SAM-dependent RNA methyltransferase, in complex with S-adenosyl-L-homocysteine | | 分子名称: | ACETIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... | | 著者 | Pioszak, A.A, Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-06-27 | | 公開日 | 2005-10-11 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Structures of a putative RNA 5-methyluridine methyltransferase, Thermus thermophilus TTHA1280, and its complex with S-adenosyl-L-homocysteine.
Acta Crystallogr.,Sect.F, 61, 2005
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2CX5
 | | Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase | | 分子名称: | A PUTATIVE TRANS-EDITING ENZYME | | 著者 | Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-06-28 | | 公開日 | 2005-12-28 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
To be Published
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2CTZ
 | | Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8 | | 分子名称: | O-acetyl-L-homoserine sulfhydrylase, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Imagawa, T, Kousumi, Y, Tsuge, H, Utsunomiya, H, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-05-24 | | 公開日 | 2005-11-24 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Crystal structure of o-acetyl homoserine sulfhydrylase from Thermus thermophilus HB8
To be Published
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2CU5
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2D64
 | | Aspartate Aminotransferase Mutant MABC With Isovaleric Acid | | 分子名称: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-09 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D61
 | | Aspartate Aminotransferase Mutant MA With Maleic Acid | | 分子名称: | Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.01 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D63
 | | Aspartate Aminotransferase Mutant MA With Isovaleric Acid | | 分子名称: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-09 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D5Y
 | | Aspartate Aminotransferase Mutant MC With Isovaleric Acid | | 分子名称: | Aspartate aminotransferase, ISOVALERIC ACID, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-08 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (1.98 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D7Y
 | | Aspartate Aminotransferase Mutant MA | | 分子名称: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-30 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.66 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D3Y
 | | Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8 | | 分子名称: | 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ACETATE ION, IRON/SULFUR CLUSTER, ... | | 著者 | Kosaka, H, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-10-04 | | 公開日 | 2006-10-17 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | | 主引用文献 | Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
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2D7Z
 | | Aspartate Aminotransferase Mutant MAB Complexed with Maleic Acid | | 分子名称: | Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-30 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D66
 | | Aspartate Aminotransferase Mutant MAB | | 分子名称: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-09 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.18 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D65
 | | Aspartate Aminotransferase Mutant MABC | | 分子名称: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-09 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2DC0
 | | Crystal structure of amidase | | 分子名称: | probable amidase | | 著者 | Ohshima, T, Sakuraba, H, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Satoh, S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-12-17 | | 公開日 | 2007-01-02 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of amidase
To be Published
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2DDG
 | | Crystal structure of uracil-DNA glycosylase in complex with AP:G containing DNA | | 分子名称: | 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*GP*GP*CP*AP*AP*CP*A)-3', ACETATE ION, ... | | 著者 | Kosaka, H, Nakagawa, N, Masui, R, Hoseki, J, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-01-28 | | 公開日 | 2007-02-13 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
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2DP6
 | | Crystal structure of uracil-DNA glycosylase in complex with AP:C containing DNA | | 分子名称: | 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*CP*GP*CP*AP*AP*CP*A)-3', DIHYDROGENPHOSPHATE ION, ... | | 著者 | Kosaka, H, Nakagawa, N, Masui, R, Kuramitsu, S, Hoseki, J, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-05-07 | | 公開日 | 2007-05-22 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structure of Family 5 Uracil-DNA Glycosylase Bound to DNA Reveals Insights into the Mechanism for Substrate Recognition and Catalysis
To be Published
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2DKF
 | | Crystal Structure of TTHA0252 from Thermus thermophilus HB8, a RNA Degradation Protein of the Metallo-beta-lactamase Superfamily | | 分子名称: | ZINC ION, metallo-beta-lactamase superfamily protein | | 著者 | Ishikawa, I, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-04-10 | | 公開日 | 2006-12-05 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Crystal structure of TTHA0252 from Thermus thermophilus HB8, a RNA degradation protein of the metallo-beta-lactamase superfamily
J.Biochem.(Tokyo), 140, 2006
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2DEM
 | | Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA | | 分子名称: | 5'-D(*AP*TP*GP*TP*TP*GP*CP*(D1P)P*TP*TP*AP*GP*TP*CP*C)-3', 5'-D(*GP*GP*AP*CP*TP*AP*AP*AP*GP*CP*AP*AP*CP*A)-3', DIHYDROGENPHOSPHATE ION, ... | | 著者 | Kosaka, H, Nakagawa, N, Masui, R, Hoseki, J, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-02-13 | | 公開日 | 2007-04-24 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
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2E6X
 | | X-ray structure of TT1592 from Thermus thermophilus HB8 | | 分子名称: | Hypothetical protein TTHA1281 | | 著者 | Yamada, M, Nakagawa, N, Kanagawa, M, Kuramitsu, S, Kamitori, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-01-05 | | 公開日 | 2007-12-18 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | X-ray structure of TT1592 from Thermus thermophilus HB8
To be Published
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2YVN
 | | Crystal structure of NDX2 from thermus thermophilus HB8 | | 分子名称: | MutT/nudix family protein | | 著者 | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-04-13 | | 公開日 | 2008-02-26 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | | 主引用文献 | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
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2YVP
 | | Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8 | | 分子名称: | MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE, MutT/nudix family protein | | 著者 | Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-04-13 | | 公開日 | 2008-02-26 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.66 Å) | | 主引用文献 | Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
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