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PDB: 62 件

5IEL
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BU of 5iel by Molmil
Structure of Lysozyme labeled with fluorescein isothiocyanate (FITC) at 1.15 Angstroms resolution
分子名称: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[(E)-(sulfanylmethylidene)amino]benzoic acid, Lysozyme C
著者Kachalova, G.S, Vlaskina, A.V, Popov, A.P, Simanovskaia, A.A, Krukova, M.V, Lipkin, A.V.
登録日2016-02-25
公開日2017-03-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure of Lysozyme labeled with fluorescein isothiocyanate (FITC) at 1.15 Angstroms resolution
To Be Published
2EWF
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BU of 2ewf by Molmil
Crystal structure of the site-specific DNA nickase N.BspD6I
分子名称: BROMIDE ION, Nicking endonuclease N.BspD6I
著者Kachalova, G.S, Bartunik, H.D, Artyukh, R.I, Rogulin, E.A, Perevyazova, T.A, Zheleznaya, L.A, Matvienko, N.I.
登録日2005-11-03
公開日2006-11-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural analysis of the heterodimeric type IIS restriction endonuclease R.BspD6I acting as a complex between a monomeric site-specific nickase and a catalytic subunit.
J.Mol.Biol., 384, 2008
5LIQ
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BU of 5liq by Molmil
The structure of C160S,C508S,C578S mutant of Nt.BspD6I nicking endonuclease at 0.185 nm resolution .
分子名称: GLYCEROL, Nicking endonuclease N.BspD6I, PHOSPHATE ION
著者Kachalova, G.S, Artyukh, R.I, Perevyazova, T.A, Yunusova, A.K, Popov, A.N, Bartunik, H.D, Zheleznaya, L.A.
登録日2016-07-15
公開日2017-08-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural features of Cysteine residues mutation of the nicking endonuclease Nt.BspD6I.
To Be Published
5LHC
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BU of 5lhc by Molmil
The structure of D456A mutant of Nt.BspD6I nicking endonuclease at 0.24 nm resolution .
分子名称: GLYCEROL, Nicking endonuclease N.BspD6I, PHOSPHATE ION
著者Kachalova, G.S, Yunusova, A.K, Popov, A.N, Artyukh, R.I, Perevyazova, T.A, Bartunik, H.D, Zheleznaya, L.A.
登録日2016-07-10
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural implication of activity loss by D456A mutant of the nicking endonuclease Nt.BspD6I.
To Be Published
5LIZ
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BU of 5liz by Molmil
The structure of Nt.BspD6I nicking endonuclease with all cysteines mutated by serine residues at 0.19 nm resolution .
分子名称: Nicking endonuclease N.BspD6I, PHOSPHATE ION
著者Kachalova, G.S, Artyukh, R.I, Perevyazova, T.A, Yunusova, A.K, Popov, A.N, Bartunik, H.D, Zheleznaya, L.A.
登録日2016-07-16
公開日2017-08-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural features of Cysteine residues mutation of the nicking endonuclease Nt.BspD6I.
To Be Published
5N9O
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BU of 5n9o by Molmil
EGFP(enhanced green fluorescent protein) mutant - L232H
分子名称: 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, Green fluorescent protein
著者Kachalova, G.S, Popov, A.P, Simanovskaya, A.A, Krukova, M.V, Lipkin, A.V.
登録日2017-02-26
公開日2018-03-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structure of EGFP(enhanced green fluorescent protein) mutant - L232H at 0.153 nm
To Be Published
3CFF
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BU of 3cff by Molmil
Photoswitchable red fluorescent protein psRFP, on-state
分子名称: GFP-like photoswitchable fluorescent protein
著者Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J.
登録日2008-03-03
公開日2009-03-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
3PNV
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BU of 3pnv by Molmil
V369M mutant of Glutamyl-tRNA synthetase from Mycobacterium tuberculosis
分子名称: Glutamyl-tRNA synthetase
著者Kachalova, G.S, Laurinavichiute, D, Bartunik, H.D.
登録日2010-11-19
公開日2011-12-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural analysis of the non-discriminating glutamyl-tRNA synthetase from Mycobacterium tuberculosis suggests minor role of anticodon recognition in tRNA(Gln) discrimination
To be Published
3CFA
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BU of 3cfa by Molmil
Anemonia sulcata red fluorescent protein asRFP
分子名称: GFP-like fluorescent protein
著者Kachalova, G.S, Gundel, S, Wiedenmann, J, Bartunik, H.D.
登録日2008-03-03
公開日2009-03-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of Anemonia sulcata red fluorescent protein asRFP
To be Published
3CFH
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BU of 3cfh by Molmil
Photoswitchable red fluorescent protein psRFP, off-state
分子名称: GFP-like photoswitchable fluorescent protein
著者Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J.
登録日2008-03-03
公開日2009-03-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of red fluorescent protein asRFP
To be Published
3PNY
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BU of 3pny by Molmil
Structure of Glutamyl-tRNA synthetase from Mycobacterium tuberculosis in space group P21
分子名称: Glutamyl-tRNA synthetase
著者Kachalova, G.S, Laurinavichiute, D, Bartunik, H.D.
登録日2010-11-20
公開日2011-12-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural analysis of the non-discriminating glutamyl-tRNA synthetase from Mycobacterium tuberculosis suggests minor role of anticodon recognition in tRNA(Gln) discrimination
To be Published
1BZP
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BU of 1bzp by Molmil
ATOMIC RESOLUTION CRYSTAL STRUCTURE ANALYSIS OF NATIVE DEOXY AND CO MYOGLOBIN FROM SPERM WHALE AT ROOM TEMPERATURE
分子名称: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Kachalova, G.S, Popov, A.N, Bartunik, H.D.
登録日1998-11-02
公開日1999-05-10
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献A steric mechanism for inhibition of CO binding to heme proteins.
Science, 284, 1999
1BZR
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BU of 1bzr by Molmil
ATOMIC RESOLUTION CRYSTAL STRUCTURE ANALYSIS OF NATIVE DEOXY AND CO MYOGLOBIN FROM SPERM WHALE AT ROOM TEMPERATURE
分子名称: CARBON MONOXIDE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kachalova, G.S, Popov, A.N, Bartunik, H.D.
登録日1998-11-03
公開日1999-05-10
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献A steric mechanism for inhibition of CO binding to heme proteins.
Science, 284, 1999
3NG7
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BU of 3ng7 by Molmil
Complex of dithionite-reduced 6-hydroxy-L-nicotine oxidase with substrate bound at active site and inhibitor at exit cavity
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-[(2R)-1-methylpyrrolidin-2-yl]pyridin-2-ol, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-11
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystallographic snapshots of the complete reaction cycle of nicotine degradation by an amine oxidase of the monoamine oxidase (MAO) family
Proc.Natl.Acad.Sci.USA, 108, 2011
4DP8
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BU of 4dp8 by Molmil
The 1.07 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 4.0
分子名称: COPPER (I) ION, Plastocyanin A, chloroplastic, ...
著者Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
登録日2012-02-13
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP5
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BU of 4dp5 by Molmil
The 1.88 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin B at pH 8.0
分子名称: COPPER (II) ION, GLYCEROL, Plastocyanin B, ...
著者Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
登録日2012-02-13
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DP0
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BU of 4dp0 by Molmil
The 1.5 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin B at pH 4.0
分子名称: COPPER (II) ION, GLYCEROL, Plastocyanin B, ...
著者Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
登録日2012-02-13
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DPA
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BU of 4dpa by Molmil
The 1.05 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 6.0
分子名称: COPPER (I) ION, Plastocyanin A, chloroplastic
著者Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
登録日2012-02-13
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
3NN0
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BU of 3nn0 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with nicotinamide
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-23
公開日2011-06-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NK2
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BU of 3nk2 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with dopamine
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-18
公開日2011-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NGC
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BU of 3ngc by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with intermediate methylmyosmine product formed during catalytic turnover
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-(1-methyl-4,5-dihydro-1H-pyrrol-2-yl)pyridin-2-ol, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-11
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NH3
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BU of 3nh3 by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with final ketone product formed during catalytic turnover
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 1-(6-hydroxypyridin-3-yl)-4-(methylamino)butan-1-one, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-14
公開日2011-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NHO
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BU of 3nho by Molmil
Complex of 6-hydroxy-L-nicotine oxidase with product bound at active site
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 1-(6-hydroxypyridin-3-yl)-4-(methylamino)butan-1-one, 6-hydroxy-L-nicotine oxidase, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-14
公開日2011-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NK1
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Complex of 6-hydroxy-L-nicotine oxidase with serotonin
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 6-hydroxy-L-nicotine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-18
公開日2011-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010
3NN6
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Crystal structure of inhibitor-bound in active centre 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans
分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, (2R,3S,4S)-5-({[(acetylcarbamoyl)amino]methyl}[(3S,4R)-6-amino-3,4-dimethylhexyl]amino)-2,3,4-trihydroxypentyl [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name), 5-[(2R)-1-methylpyrrolidin-2-yl]pyridin-2-ol, ...
著者Kachalova, G.S, Bartunik, H.D.
登録日2010-06-23
公開日2011-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Crystal structure analysis of free and substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans.
J.Mol.Biol., 396, 2010

 

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