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PDB: 534 results

1MXJ
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BU of 1mxj by Molmil
NMR solution structure of benz[a]anthracene-dG in ras codon 12,2; GGCAGXTGGTG
Descriptor: 1S,2R,3S,4R-TETRAHYDRO-BENZO[A]ANTHRACENE-2,3,4-TRIOL, 5'-D(*CP*AP*CP*CP*AP*CP*CP*TP*GP*CP*C)-3', 5'-D(*GP*GP*CP*AP*GP*GP*TP*GP*GP*TP*G)-3'
Authors:Kim, H.-Y.H, Wilkinson, A.S, Harris, C.M, Harris, T.M, Stone, M.P.
Deposit date:2002-10-02
Release date:2003-03-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Minor Groove Orientation for the (1S,2R,3S,4R)-N2-[1-(1,2,3,4-tetrahydro-2,3,4-trihydroxy-benz[a]anthracenyl)]-2'-deoxyguanosyl Adduct in the N-ras Codon 12 sequence
Biochemistry, 42, 2003
6CPA
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BU of 6cpa by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF CARBOXYPEPTIDASE A WITH A STRONGLY BOUND PHOSPHONATE IN A NEW CRYSTALLINE FORM: COMPARISON WITH STRUCTURES OF OTHER COMPLEXES
Descriptor: CARBOXYPEPTIDASE A, O-(((1R)-((N-PHENYLMETHOXYCARBONYL-L-ALANYL)AMINO)ETHYL)HYDROXYPHOSPHONO)-L-BENZYLACETIC ACID, ZINC ION
Authors:Kim, H, Lipscomb, W.N.
Deposit date:1990-02-15
Release date:1991-10-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of carboxypeptidase A with a strongly bound phosphonate in a new crystalline form: comparison with structures of other complexes.
Biochemistry, 29, 1990
6NBA
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BU of 6nba by Molmil
Crystal structure of Human Cystathionine gamma lyase with S-3-Carboxpropyl-L-Cysteine
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Cystathionine gamma-lyase
Authors:Kim, H, Yadav, P.K, Banerjee, R, Cho, U.-S.
Deposit date:2018-12-06
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:S-3-Carboxypropyl-l-cysteine specifically inhibits cystathionine gamma-lyase-dependent hydrogen sulfide synthesis.
J.Biol.Chem., 294, 2019
8J1O
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BU of 8j1o by Molmil
Crystal structure of HaloTag complexed with BTTA
Descriptor: CHLORIDE ION, Haloalkane dehalogenase, N-[[1-[2-[2-(2-hexoxyethoxy)ethoxy]ethyl]-1,2,3-triazol-4-yl]methyl]-1-(1H-1,2,3-triazol-4-yl)-N-(2H-1,2,3-triazol-4-ylmethyl)methanamine, ...
Authors:Kim, H, Rhee, H, Lee, C.
Deposit date:2023-04-13
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal structure of HaloTag complexed with BTTA
To Be Published
1A5C
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BU of 1a5c by Molmil
FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE FROM PLASMODIUM FALCIPARUM
Descriptor: FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE
Authors:Kim, H, Certa, U, Dobeli, H, Jakob, P, Hol, W.G.J.
Deposit date:1998-02-13
Release date:1998-06-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of fructose-1,6-bisphosphate aldolase from the human malaria parasite Plasmodium falciparum.
Biochemistry, 37, 1998
2MSY
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BU of 2msy by Molmil
Solution structure of Hox homeodomain
Descriptor: Homeobox protein Hox-C9
Authors:Kim, H, Park, S, Han, J, Lee, B.
Deposit date:2014-08-11
Release date:2015-09-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insight into the interaction between the Hox and HMGB1 and understanding of the HMGB1-enhancing effect of Hox-DNA binding.
Biochim.Biophys.Acta, 1854, 2015
5B4P
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BU of 5b4p by Molmil
Complex structure of human C5a and its binding repebody
Descriptor: C5a anaphylatoxin, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Kim, H.-S, Choi, J.M, Hwang, D.E.
Deposit date:2016-04-12
Release date:2017-04-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complex structure of human C5a and its binding repebody
To Be Published
4Y1E
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BU of 4y1e by Molmil
SAV1875-C105D
Descriptor: Uncharacterized protein SAV1875
Authors:Kim, H.J, Kwon, A.R, Lee, B.J.
Deposit date:2015-02-07
Release date:2016-01-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
8GHN
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BU of 8ghn by Molmil
Composite model of the yeast Hir Complex with Asf1/H3/H4
Descriptor: Histone H3, Histone H4, Histone chaperone, ...
Authors:Kim, H.J, Murakami, K.
Deposit date:2023-03-10
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structure of the Hir histone chaperone complex.
Mol.Cell, 84, 2024
8GHM
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BU of 8ghm by Molmil
Hir1 WD40 domains and Asf1/H3/H4
Descriptor: Histone H3, Histone H4, Histone chaperone, ...
Authors:Kim, H.J, Murakami, K.
Deposit date:2023-03-10
Release date:2024-07-10
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structure of the Hir histone chaperone complex.
Mol.Cell, 84, 2024
8GHL
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BU of 8ghl by Molmil
the Hir complex core
Descriptor: Histone transcription regulator 3, Protein HIR1, Protein HIR2
Authors:Kim, H.J, Murakami, K.
Deposit date:2023-03-10
Release date:2024-07-17
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structure of the Hir histone chaperone complex.
Mol.Cell, 84, 2024
4Y1F
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BU of 4y1f by Molmil
SAV1875-E17D
Descriptor: Uncharacterized protein SAV1875
Authors:Kim, H.J, Kwon, A.R, Lee, B.J.
Deposit date:2015-02-07
Release date:2016-01-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y1R
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BU of 4y1r by Molmil
SAV1875-cysteinesulfonic acid
Descriptor: Uncharacterized protein SAV1875
Authors:Kim, H.J, Kwon, A.R, Lee, B.J.
Deposit date:2015-02-08
Release date:2016-01-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y0N
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BU of 4y0n by Molmil
SAV1875
Descriptor: Uncharacterized protein SAV1875
Authors:Kim, H.J, Kwon, A.R, Lee, B.J.
Deposit date:2015-02-06
Release date:2016-01-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4Y1G
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BU of 4y1g by Molmil
SAV1875-E17N
Descriptor: Uncharacterized protein SAV1875
Authors:Kim, H.J, Kwon, A.R, Lee, B.J.
Deposit date:2015-02-07
Release date:2016-01-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016
4DXM
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BU of 4dxm by Molmil
Crystal Structure of an ancestral GFP-like protein
Descriptor: GREEN FLUORESCENT PROTEIN, SULFATE ION
Authors:Kim, H, Fromme, R, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015
4DIT
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BU of 4dit by Molmil
Crystal Structure of GSK3beta in complex with a Imidazopyridine inhibitor
Descriptor: Glycogen synthase kinase-3 beta, N-(pyridin-3-yl)-2-(thiophen-3-yl)-3H-imidazo[4,5-b]pyridine-7-carboxamide
Authors:Kim, H.T, Lee, S.C, Chang, H.J.
Deposit date:2012-01-31
Release date:2012-02-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of GSK3beta in complex with a Imidazolopyridine inhibitor
To be Published
4DM1
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BU of 4dm1 by Molmil
Contribution of disulfide bond toward thermostability in hyperthermostable endocellulase
Descriptor: 458aa long hypothetical endo-1,4-beta-glucanase, PHOSPHATE ION
Authors:Kim, H.-W, Ishikawa, K.
Deposit date:2012-02-06
Release date:2013-02-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Contribution of disulfide bond toward thermostability in hyperthermostable endocellulase
To be Published
4DXI
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BU of 4dxi by Molmil
Crystal Structure of an Ancestor of All Faviina Proteins
Descriptor: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:Kim, H, Wachter, R.M.
Deposit date:2012-02-27
Release date:2013-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins.
Structure, 23, 2015
4GOB
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BU of 4gob by Molmil
Low pH Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA)
Descriptor: Kaede-type Fluorescent Protein
Authors:Kim, H, Grunkemeyer, T.J, Chen, L, Fromme, R, Wachter, R.M.
Deposit date:2012-08-19
Release date:2013-07-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Acid-base catalysis and crystal structures of a least evolved ancestral GFP-like protein undergoing green-to-red photoconversion.
Biochemistry, 52, 2013
8GHA
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BU of 8gha by Molmil
Hir3 Arm/Tail, Hir2 WD40, C-terminal Hpc2
Descriptor: Histone promoter control protein 2, Histone transcription regulator 3, Protein HIR2
Authors:Kim, H.J, Murakami, K.
Deposit date:2023-03-09
Release date:2024-07-10
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Structure of the Hir histone chaperone complex.
Mol.Cell, 84, 2024
1AD6
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BU of 1ad6 by Molmil
DOMAIN A OF HUMAN RETINOBLASTOMA TUMOR SUPPRESSOR
Descriptor: RETINOBLASTOMA TUMOR SUPPRESSOR
Authors:Kim, H.Y, Cho, Y.
Deposit date:1997-02-21
Release date:1998-08-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural similarity between the pocket region of retinoblastoma tumour suppressor and the cyclin-box.
Nat.Struct.Biol., 4, 1997
1BPN
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BU of 1bpn by Molmil
DIFFERENTIATION AND IDENTIFICATION OF THE TWO CATALYTIC METAL BINDING SITES IN BOVINE LENS LEUCINE AMINOPEPTIDASE BY X-RAY CRYSTALLOGRAPHY
Descriptor: LEUCINE AMINOPEPTIDASE, ZINC ION
Authors:Kim, H, Lipscomb, W.N.
Deposit date:1993-03-02
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Differentiation and identification of the two catalytic metal binding sites in bovine lens leucine aminopeptidase by x-ray crystallography.
Proc.Natl.Acad.Sci.USA, 90, 1993
1BLL
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BU of 1bll by Molmil
X-RAY CRYSTALLOGRAPHIC DETERMINATION OF THE STRUCTURE OF BOVINE LENS LEUCINE AMINOPEPTIDASE COMPLEXED WITH AMASTATIN: FORMULATION OF A CATALYTIC MECHANISM FEATURING A GEM-DIOLATE TRANSITION STATE
Descriptor: AMASTATIN, LEUCINE AMINOPEPTIDASE, ZINC ION
Authors:Kim, H, Lipscomb, W.N.
Deposit date:1993-03-02
Release date:1994-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystallographic determination of the structure of bovine lens leucine aminopeptidase complexed with amastatin: formulation of a catalytic mechanism featuring a gem-diolate transition state.
Biochemistry, 32, 1993
1BPM
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BU of 1bpm by Molmil
DIFFERENTIATION AND IDENTIFICATION OF THE TWO CATALYTIC METAL BINDING SITES IN BOVINE LENS LEUCINE AMINOPEPTIDASE BY X-RAY CRYSTALLOGRAPHY
Descriptor: LEUCINE AMINOPEPTIDASE, MAGNESIUM ION, ZINC ION
Authors:Kim, H, Lipscomb, W.N.
Deposit date:1993-03-02
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Differentiation and identification of the two catalytic metal binding sites in bovine lens leucine aminopeptidase by x-ray crystallography.
Proc.Natl.Acad.Sci.USA, 90, 1993

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