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PDB: 492 results

2O6Q
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Structural diversity of the hagfish Variable Lymphocyte Receptors A29
Descriptor: Variable lymphocyte receptor A
Authors:Lee, J.O, Kim, H.M, Oh, S.C.
Deposit date:2006-12-08
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural diversity of the hagfish variable lymphocyte receptors
J.Biol.Chem., 282, 2007
1OYN
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BU of 1oyn by Molmil
Crystal structure of PDE4D2 in complex with (R,S)-rolipram
Descriptor: ROLIPRAM, ZINC ION, cAMP-specific phosphodiesterase PDE4D2
Authors:Huai, Q, Wang, H, Sun, Y, Kim, H.Y, Liu, Y, Ke, H.
Deposit date:2003-04-05
Release date:2003-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structures of PDE4D in complex with roliprams and implication on inhibitor selectivity
Structure, 11, 2003
2O6R
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Structural diversity of the hagfish Variable Lymphocyte Receptors B61
Descriptor: Variable lymphocyte receptor B
Authors:Lee, J.O, Kim, H.M, Oh, S.C.
Deposit date:2006-12-08
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural diversity of the hagfish variable lymphocyte receptors
J.Biol.Chem., 282, 2007
2XJ3
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BU of 2xj3 by Molmil
High resolution structure of the T55C mutant of CylR2.
Descriptor: CYLR2 SYNONYM CYTOLYSIN REPRESSOR 2, GLYCEROL
Authors:Gruene, T, Cho, M.K, Karyagina, I, Kim, H.Y, Grosse, C, Giller, K, Zweckstetter, M, Becker, S.
Deposit date:2010-07-02
Release date:2011-02-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Integrated Analysis of the Conformation of a Protein-Linked Spin Label by Crystallography, Epr and NMR Spectroscopy.
J.Biomol.NMR, 49, 2011
1Q9M
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Three dimensional structures of PDE4D in complex with roliprams and implication on inhibitor selectivity
Descriptor: ROLIPRAM, ZINC ION, cAMP-specific phosphodiesterase PDE4D2
Authors:Huai, Q, Wang, H, Sun, Y, Kim, H.Y, Liu, Y, Ke, H.
Deposit date:2003-08-25
Release date:2003-09-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three dimensional structures of PDE4D in complex with roliprams and implication on inhibitor selectivity
Structure, 11, 2003
1QCR
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BU of 1qcr by Molmil
CRYSTAL STRUCTURE OF BOVINE MITOCHONDRIAL CYTOCHROME BC1 COMPLEX, ALPHA CARBON ATOMS ONLY
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, UBIQUINOL CYTOCHROME C OXIDOREDUCTASE
Authors:Xia, D, Yu, C.A, Kim, H, Xia, J.Z, Kachurin, A, Zhang, L, Yu, L, Deisenhofer, J.
Deposit date:1997-05-17
Release date:1998-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the cytochrome bc1 complex from bovine heart mitochondria.
Science, 277, 1997
2K21
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BU of 2k21 by Molmil
NMR structure of human KCNE1 in LMPG micelles at pH 6.0 and 40 degree C
Descriptor: Potassium voltage-gated channel subfamily E member
Authors:Kang, C, Tian, C, Sonnichsen, F.D, Smith, J.A, Meiler, J, George, A.L, Vanoye, C.G, Sanders, C.R, Kim, H.
Deposit date:2008-03-19
Release date:2008-12-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of KCNE1 and implications for how it modulates the KCNQ1 potassium channel.
Biochemistry, 47, 2008
7WBK
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BU of 7wbk by Molmil
Crystal structure of Legionella pneumophila effector protein Lpg0081
Descriptor: Lpg0081, SULFATE ION
Authors:Lee, J, Kim, H, Oh, B.H.
Deposit date:2021-12-16
Release date:2022-06-15
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WBM
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BU of 7wbm by Molmil
Crystal structure of Legionella pneumophila effector protein Lpg0081
Descriptor: Lpg0081, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Lee, J, Kim, H, Oh, B.H.
Deposit date:2021-12-17
Release date:2022-06-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Reversible modification of mitochondrial ADP/ATP translocases by paired Legionella effector proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
1RF6
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Structural Studies of Streptococcus pneumoniae EPSP Synthase in S3P-GLP Bound State
Descriptor: 5-enolpyruvylshikimate-3-phosphate synthase, GLYPHOSATE, SHIKIMATE-3-PHOSPHATE
Authors:Park, H, Hilsenbeck, J.L, Kim, H.J, Shuttleworth, W.A, Park, Y.H, Evans, J.N, Kang, C.
Deposit date:2003-11-07
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state.
Mol.Microbiol., 51, 2004
7FDE
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BU of 7fde by Molmil
CryoEM Structures of Reconstituted V-ATPase, Oxr1 bound V1
Descriptor: Oxidation resistance protein 1, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Khan, M.M, Lee, S, Oot, R.A, Couoh-Cardel, S, KIm, H, Wilkens, S, Roh, S.H.
Deposit date:2021-07-16
Release date:2021-12-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:CryoEM Structures of Reconstituted V-ATPase and Oxr1-bound V1 Reveal a Novel Mechanism of Regulation.
Embo J., 2021
1RF4
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BU of 1rf4 by Molmil
Structural Studies of Streptococcus pneumoniae EPSP Synthase, Tetrahedral intermediate Bound State
Descriptor: (3R,4S,5R)-5-{[(1R)-1-CARBOXY-2-FLUORO-1-(PHOSPHONOOXY)ETHYL]OXY}-4-HYDROXY-3-(PHOSPHONOOXY)CYCLOHEX-1-ENE-1-CARBOXYLIC ACID, 5-enolpyruvylshikimate-3-phosphate synthase
Authors:Park, H, Hilsenbeck, J.L, Kim, H.J, Shuttleworth, W.A, Park, Y.H, Evans, J.N, Kang, C.
Deposit date:2003-11-07
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state.
Mol.Microbiol., 51, 2004
2KDC
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BU of 2kdc by Molmil
NMR Solution Structure of E. coli diacylglycerol kinase (DAGK) in DPC micelles
Descriptor: Diacylglycerol kinase
Authors:Van Horn, W.D, Kim, H, Ellis, C.D, Hadziselimovic, A, Sulistijo, E.S, Karra, M.D, Tian, C, Sonnichsen, F.D, Sanders, C.R.
Deposit date:2009-01-06
Release date:2009-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution nuclear magnetic resonance structure of membrane-integral diacylglycerol kinase
Science, 324, 2009
1RF5
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BU of 1rf5 by Molmil
Structural Studies of Streptococcus pneumoniae EPSP Synthase in Unliganded State
Descriptor: 5-enolpyruvylshikimate-3-phosphate synthase
Authors:Park, H, Hilsenbeck, J.L, Kim, H.J, Shuttleworth, W.A, Park, Y.H, Evans, J.N, Kang, C.
Deposit date:2003-11-07
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state.
Mol.Microbiol., 51, 2004
1Y0Q
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BU of 1y0q by Molmil
Crystal structure of an active group I ribozyme-product complex
Descriptor: 5'-R(*GP*CP*UP*U)-3', Group I ribozyme, MAGNESIUM ION, ...
Authors:Golden, B.L, Kim, H, Chase, E.
Deposit date:2004-11-16
Release date:2004-12-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of a phage Twort group I ribozyme-product complex
Nat.Struct.Mol.Biol., 12, 2005
2KEF
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BU of 2kef by Molmil
Solution NMR structures of human hepcidin at 325K
Descriptor: Hepcidin
Authors:Jordan, J.B, Poppe, L, Hainu, M, Arvedson, T, Syed, R, Li, V, Kohno, H, Kim, H, Miranda, L.P, Cheetham, J, Sasu, B.J.
Deposit date:2009-01-29
Release date:2009-06-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Hepcidin revisited, disulfide connectivity, dynamics, and structure.
J.Biol.Chem., 284, 2009
3SJF
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BU of 3sjf by Molmil
X-ray structure of human glutamate carboxypeptidase II in complex with a urea-based inhibitor (A25)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Plechanovova, A, Byun, Y, Alquicer, G, Skultetyova, L, Mlcochova, P, Nemcova, A, Kim, H, Navratil, M, Mease, R, Lubkowski, J, Pomper, M, Konvalinka, J, Rulisek, L, Barinka, C.
Deposit date:2011-06-21
Release date:2011-10-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity.
J.Med.Chem., 54, 2011
2LYP
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BU of 2lyp by Molmil
NOE-based 3D structure of the monomer of CylR2 in equilibrium with predissociated homodimer at 266K (-7 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2LYQ
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NOE-based 3D structure of the monomeric intermediate of CylR2 at 262K (-11 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
3SJX
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X-ray structure of human glutamate carboxypeptidase II (the E424A inactive mutant) in complex with N-acetyl-aspartyl-methionine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Plechanovova, A, Byun, Y, Alquicer, G, Skultetyova, L, Mlcochova, P, Nemcova, A, Kim, H, Navratil, M, Mease, R, Lubkowski, J, Pomper, M, Konvalinka, J, Rulisek, L, Barinka, C.
Deposit date:2011-06-22
Release date:2011-10-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity.
J.Med.Chem., 54, 2011
2LYR
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BU of 2lyr by Molmil
NOE-based 3D structure of the monomeric partially-folded intermediate of CylR2 at 259K (-14 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2LYK
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NOE-based 3D structure of the CylR2 homodimer at 270K (-3 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
3SJG
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BU of 3sjg by Molmil
Human glutamate carboxypeptidase II (E424A inactive mutant ) in complex with N-acetyl-aspartyl-aminooctanoic acid
Descriptor: (2S)-2-[(N-acetyl-L-alpha-aspartyl)amino]nonanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Plechanovova, A, Byun, Y, Alquicer, G, Skultetyova, L, Mlcochova, P, Nemcova, A, Kim, H, Navratil, M, Mease, R, Lubkowski, J, Pomper, M, Konvalinka, J, Rulisek, L, Barinka, C.
Deposit date:2011-06-21
Release date:2011-10-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity.
J.Med.Chem., 54, 2011
3SJE
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BU of 3sje by Molmil
X-ray structure of human glutamate carboxypeptidase II (the E424A inactive mutant) in complex with N-acetyl-aspartyl-aminononanoic acid
Descriptor: (2S)-2-[(N-acetyl-L-alpha-aspartyl)amino]nonanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Plechanovova, A, Byun, Y, Alquicer, G, Skultetyova, L, Mlcochova, P, Nemcova, A, Kim, H, Navratil, M, Mease, R, Lubkowski, J, Pomper, M, Konvalinka, J, Rulisek, L, Barinka, C.
Deposit date:2011-06-21
Release date:2011-10-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel Substrate-Based Inhibitors of Human Glutamate Carboxypeptidase II with Enhanced Lipophilicity.
J.Med.Chem., 54, 2011
2LYL
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BU of 2lyl by Molmil
NOE-based 3D structure of the predissociated homodimer of CylR2 in equilibrium with monomer at 266K (-7 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013

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