7VFM
| Crystal structure of SdgB (UDP and SD peptide-binding form) | 分子名称: | Glycosyl transferase, group 1 family protein, SER-ASP-SER-ASP, ... | 著者 | Kim, D.-G, Baek, I, Lee, Y, Kim, H.S. | 登録日 | 2021-09-13 | 公開日 | 2021-11-24 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.28 Å) | 主引用文献 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins. Acta Crystallogr D Struct Biol, 77, 2021
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7VFL
| Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form) | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, group 1 family protein, ... | 著者 | Kim, D.-G, Baek, I, Lee, Y, Kim, H.S. | 登録日 | 2021-09-13 | 公開日 | 2021-11-24 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | 主引用文献 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins. Acta Crystallogr D Struct Biol, 77, 2021
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7VFO
| Crystal structure of SdgB (Phosphate-binding form) | 分子名称: | Glycosyl transferase, group 1 family protein, PHOSPHATE ION | 著者 | Kim, D.-G, Baek, I, Lee, Y, Kim, H.S. | 登録日 | 2021-09-13 | 公開日 | 2021-11-24 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins. Acta Crystallogr D Struct Biol, 77, 2021
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7VFK
| Crystal structure of SdgB (ligand-free form) | 分子名称: | GLYCEROL, Glycosyl transferase, group 1 family protein, ... | 著者 | Kim, D.-G, Baek, I, Lee, Y, Kim, H.S. | 登録日 | 2021-09-13 | 公開日 | 2021-11-24 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins. Acta Crystallogr D Struct Biol, 77, 2021
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7EC6
| Crystal structure of SdgB (complexed with peptides) | 分子名称: | ASP-SER-ASP, Glycosyl transferase, group 1 family protein | 著者 | Kim, D.-G, Baek, I, Lee, Y, Kim, H.S. | 登録日 | 2021-03-11 | 公開日 | 2022-03-16 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins. Acta Crystallogr D Struct Biol, 77, 2021
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5HOE
| Crystal structrue of Est24, a carbohydrate acetylesterase from Sinorhizobium meliloti | 分子名称: | HEXAETHYLENE GLYCOL, Hydrolase, PHOSPHATE ION | 著者 | Oh, C, Ryu, B.H, An, D.R, Nguyen, D.D, Yoo, W, Kim, T, Ngo, D.T, Kim, H.S, Park, J.S, Kim, K.K, Kim, T.D. | 登録日 | 2016-01-19 | 公開日 | 2016-04-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Structural and Biochemical Characterization of an Octameric Carbohydrate Acetylesterase from Sinorhizobium meliloti. Febs Lett., 590, 2016
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3GIO
| Crystal structure of the TNF-alpha inducing protein (Tip alpha) from Helicobacter pylori | 分子名称: | Putative uncharacterized protein | 著者 | Jang, J.Y, Yoon, H.J, Yoon, J.Y, Kim, H.S, Lee, S.J, Kim, K.H, Kim, D.J, Han, B.G, Lee, B.I, Jang, S, Suh, S.W. | 登録日 | 2009-03-05 | 公開日 | 2009-08-04 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal Structure of the TNF-alpha-Inducing Protein (Tipalpha) from Helicobacter pylori: Insights into Its DNA-Binding Activity. J.Mol.Biol., 2009
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4G4W
| Crystal structure of peptidoglycan-associated lipoprotein from Acinetobacter baumannii | 分子名称: | ALANINE, GLYCEROL, Peptidoglycan-associated lipoprotein, ... | 著者 | Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y. | 登録日 | 2012-07-16 | 公開日 | 2013-07-24 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA to be published
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4G4V
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5Y86
| Crystal structure of kinase | 分子名称: | 1,2-ETHANEDIOL, 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Dual specificity tyrosine-phosphorylation-regulated kinase 3, ... | 著者 | Kim, K.L, Cha, J.S, Cho, Y.S, Kim, H.Y, Chang, N.P, Cho, H.S. | 登録日 | 2017-08-18 | 公開日 | 2018-05-02 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal Structure of Human Dual-Specificity Tyrosine-Regulated Kinase 3 Reveals New Structural Features and Insights into its Auto-phosphorylation J. Mol. Biol., 430, 2018
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6OIB
| Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ... | 著者 | Banerjee, R, Cho, U.S, Kim, H, Moon, S. | 登録日 | 2019-04-09 | 公開日 | 2020-01-15 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation. Cell Chem Biol, 26, 2019
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7VFN
| Crystal structure of SdgB (SD peptide-binding form) | 分子名称: | ASP-SER-ASP, Glycosyl transferase, group 1 family protein | 著者 | Kim, D.-G, Baek, I, Lee, Y, Kim, H.S. | 登録日 | 2021-09-13 | 公開日 | 2021-11-24 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins. Acta Crystallogr D Struct Biol, 77, 2021
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6XAV
| CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex bound with NusG | 分子名称: | DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. | 登録日 | 2020-06-04 | 公開日 | 2020-12-16 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (7.7 Å) | 主引用文献 | Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
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1Q1Y
| Crystal Structures of Peptide Deformylase from Staphylococcus aureus Complexed with Actinonin | 分子名称: | ACTINONIN, Peptide deformylase, ZINC ION | 著者 | Yoon, H.J, Lee, S.K, Kim, H.L, Kim, H.W, Kim, H.W, Lee, J.Y, Mikami, B, Suh, S.W. | 登録日 | 2003-07-23 | 公開日 | 2004-07-23 | 最終更新日 | 2017-02-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent Proteins, 57, 2004
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7DH0
| Activity optimized complex I (open form) | 分子名称: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... | 著者 | Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. | 登録日 | 2020-11-12 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (4.2 Å) | 主引用文献 | A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
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7DGZ
| Activity optimized complex I (closed form) | 分子名称: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... | 著者 | Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. | 登録日 | 2020-11-12 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
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7DGS
| Activity optimized supercomplex state3 | 分子名称: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... | 著者 | Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. | 登録日 | 2020-11-12 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (7.8 Å) | 主引用文献 | A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
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6XAS
| CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex | 分子名称: | DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. | 登録日 | 2020-06-04 | 公開日 | 2020-12-16 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
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7DGR
| Activity optimized supercomplex state2 | 分子名称: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... | 著者 | Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. | 登録日 | 2020-11-12 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (4.6 Å) | 主引用文献 | A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
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7DGQ
| Activity optimized supercomplex state1 | 分子名称: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... | 著者 | Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. | 登録日 | 2020-11-12 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (5 Å) | 主引用文献 | A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
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7DKF
| Activity optimized supercomplex state4 | 分子名称: | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... | 著者 | Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E. | 登録日 | 2020-11-24 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (8.3 Å) | 主引用文献 | A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex. Antioxid.Redox Signal., 2022
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5C7W
| 5'-monophosphate Z:P Guanine Riboswitch bound to hypoxanthine. | 分子名称: | 5'-monophosphate Z:P guanine riboswitch, COBALT HEXAMMINE(III), HYPOXANTHINE | 著者 | Hernandez, A.R, Shao, Y, Hoshika, S, Yang, Z, Shelke, S.A, Herrou, J, Kim, H.-J, Kim, M.-J, Piccirilli, J.A, Benner, S.A. | 登録日 | 2015-06-25 | 公開日 | 2015-08-12 | 最終更新日 | 2024-05-01 | 実験手法 | X-RAY DIFFRACTION (3.22 Å) | 主引用文献 | A Crystal Structure of a Functional RNA Molecule Containing an Artificial Nucleobase Pair. Angew.Chem.Int.Ed.Engl., 54, 2015
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5C7U
| 5'-monophosphate wt Guanine Riboswitch bound to hypoxanthine. | 分子名称: | 5'-monophosphate wt guanine riboswitch, COBALT HEXAMMINE(III), HYPOXANTHINE | 著者 | Hernandez, A.R, Shao, Y, Hoshika, S, Yang, Z, Shelke, S.A, Herrou, J, Kim, H.-J, Kim, M.-J, Piccirilli, J.A, Benner, S.A. | 登録日 | 2015-06-24 | 公開日 | 2015-08-12 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (3.05 Å) | 主引用文献 | A Crystal Structure of a Functional RNA Molecule Containing an Artificial Nucleobase Pair. Angew.Chem.Int.Ed.Engl., 54, 2015
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3GDE
| The closed conformation of ATP-dependent DNA ligase from Archaeoglobus fulgidus | 分子名称: | DNA ligase, PHOSPHATE ION | 著者 | Kim, D.J, Kim, H.-W, Kim, O, Kim, H.S, Lee, S.J, Suh, S.W. | 登録日 | 2009-02-24 | 公開日 | 2009-12-15 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | ATP-dependent DNA ligase from Archaeoglobus fulgidus displays a tightly closed conformation Acta Crystallogr.,Sect.F, 65, 2009
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6OIC
| Crystal structure of human Sulfide Quinone Oxidoreductase in complex with coenzyme Q (sulfite soaked) | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, HYDROSULFURIC ACID, Sulfide:quinone oxidoreductase, ... | 著者 | Banerjee, R, Cho, U.S, Kim, H, Moon, S. | 登録日 | 2019-04-09 | 公開日 | 2020-01-15 | 実験手法 | X-RAY DIFFRACTION (2.21 Å) | 主引用文献 | A Catalytic Trisulfide in Human Sulfide Quinone Oxidoreductase Catalyzes Coenzyme A Persulfide Synthesis and Inhibits Butyrate Oxidation. Cell Chem Biol, 26, 2019
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