Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 100 results

8V2T
DownloadVisualize
BU of 8v2t by Molmil
Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148591
Descriptor: 1,5,6-trideoxy-6,6-difluoro-1-(N-hydroxyformamido)-6-phosphono-D-ribo-hexitol, CHLORIDE ION, Phosphoheptose isomerase, ...
Authors:Junop, M.S, Brown, C, Szabla, R.
Deposit date:2023-11-23
Release date:2023-12-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:Potentiating Activity of GmhA Inhibitors on Gram-Negative Bacteria.
J.Med.Chem., 67, 2024
8V4J
DownloadVisualize
BU of 8v4j by Molmil
Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148233
Descriptor: 1-deoxy-1-[formyl(hydroxy)amino]-5-O-phosphono-D-ribitol, CHLORIDE ION, Phosphoheptose isomerase, ...
Authors:Junop, M.S, Brown, C, Szabla, R.
Deposit date:2023-11-29
Release date:2023-12-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Potentiating Activity of GmhA Inhibitors on Gram-Negative Bacteria.
J.Med.Chem., 67, 2024
1FU1
DownloadVisualize
BU of 1fu1 by Molmil
CRYSTAL STRUCTURE OF HUMAN XRCC4
Descriptor: ACETIC ACID, DNA REPAIR PROTEIN XRCC4
Authors:Junop, M, Modesti, M, Guarne, A, Gellert, M, Yang, W.
Deposit date:2000-09-13
Release date:2000-12-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Xrcc4 DNA repair protein and implications for end joining.
EMBO J., 19, 2000
1FW6
DownloadVisualize
BU of 1fw6 by Molmil
CRYSTAL STRUCTURE OF A TAQ MUTS-DNA-ADP TERNARY COMPLEX
Descriptor: 5'-D(*GP*CP*GP*AP*CP*GP*CP*TP*AP*GP*CP*GP*TP*GP*CP*GP*GP*CP*TP*CP*GP*TP*C)-3', 5'-D(*GP*GP*AP*CP*GP*AP*GP*CP*CP*GP*CP*CP*GP*CP*TP*AP*GP*CP*GP*TP*CP*G)-3', ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Junop, M.S, Obmolova, G, Rausch, K, Hsieh, P, Yang, W.
Deposit date:2000-09-21
Release date:2001-02-19
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Composite active site of an ABC ATPase: MutS uses ATP to verify mismatch recognition and authorize DNA repair.
Mol.Cell, 7, 2001
2FQ6
DownloadVisualize
BU of 2fq6 by Molmil
Cystathionine beta-lyase (cbl) from escherichia coli in complex with n-hydrazinocarbonylmethyl-2-trifluoromethyl-benzamide
Descriptor: Cystathionine beta-lyase, PHOSPHORIC ACID MONO-(5-HYDROXY-6-METHYL-4-{[2-(2-TRIFLUOROMETHYL-BENZOYLAMINO)-ACETYL]-HYDRAZONOMETHYL}-PYRIDIN-3-YLMETHYL)ESTER
Authors:Junop, M.S.
Deposit date:2006-01-17
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Inhibitors of bacterial cystathionine beta-lyase: leads for new antimicrobial agents and probes of enzyme structure and function.
J.Med.Chem., 50, 2007
2ANO
DownloadVisualize
BU of 2ano by Molmil
Crystal structure of E.coli dihydrofolate reductase in complex with NADPH and the inhibitor MS-SH08-17
Descriptor: 1-{[N-(1-IMINO-GUANIDINO-METHYL)]SULFANYLMETHYL}-3-TRIFLUOROMETHYL-BENZENE, Dihydrofolate reductase, MANGANESE (II) ION, ...
Authors:Summerfield, R.L, Daigle, D.M, Mayer, S, Jackson, S.G, Organ, M, Hughes, D.W, Brown, E.D, Junop, M.S.
Deposit date:2005-08-11
Release date:2006-07-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:A 2.13 A Structure of E. coli Dihydrofolate Reductase Bound to a Novel Competitive Inhibitor Reveals a New Binding Surface Involving the M20 Loop Region
J.Med.Chem., 49, 2006
4MAL
DownloadVisualize
BU of 4mal by Molmil
TPR3 of FimV from P. aeruginosa (PAO1)
Descriptor: Motility protein FimV
Authors:Nguyen, Y, Zhang, K, Daniel-Ivad, M, Sugiman-Marangos, S.N, Junop, M.S, Burrows, L.L, Howell, P.L.
Deposit date:2013-08-16
Release date:2014-08-20
Last modified:2016-02-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of TPR2 from FimV
To be Published
3L1V
DownloadVisualize
BU of 3l1v by Molmil
Crystal structure of GmhB from E. coli in complex with calcium and phosphate.
Descriptor: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, PHOSPHATE ION, ...
Authors:Sugiman-Marangos, S.N, Junop, M.S.
Deposit date:2009-12-14
Release date:2010-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural and kinetic characterization of the LPS biosynthetic enzyme D-alpha,beta-D-heptose-1,7-bisphosphate phosphatase (GmhB) from Escherichia coli.
Biochemistry, 49, 2010
6ED7
DownloadVisualize
BU of 6ed7 by Molmil
Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772
Descriptor: 2-[(2-nitrophenyl)sulfanyl]acetohydrazide, 7,8-diamino-pelargonic acid aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Brown, C.M, Zlitni, S, Chan, J, Brown, E.D, Junop, M.S.
Deposit date:2018-08-08
Release date:2019-08-21
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor MAC13772
To Be Published
7UDI
DownloadVisualize
BU of 7udi by Molmil
Full-length dimer of DNA-Damage Response Protein C from Deinococcus radiodurans
Descriptor: DNA damage response protein DdrC, SULFATE ION
Authors:Szabla, R, Li, M.C, Junop, M.S.
Deposit date:2022-03-19
Release date:2023-02-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:DdrC, a unique DNA repair factor from D. radiodurans, senses and stabilizes DNA breaks through a novel lesion-recognition mechanism.
Nucleic Acids Res., 2024
6BCN
DownloadVisualize
BU of 6bcn by Molmil
I-LtrI E184D bound to cognate substrate (pre-cleavage complex)
Descriptor: CALCIUM ION, DNA (26-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
Authors:Brown, C, Zhang, K, McMurrough, T.A, Gloor, G.B, Edgell, D.R, Junop, M.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Nucleic Acids Res., 46, 2018
8U0G
DownloadVisualize
BU of 8u0g by Molmil
Full-length dimer of DNA-Damage Response Protein C from Deinococcus radiodurans - Crystal form xMJ7124
Descriptor: DNA damage response protein C
Authors:Szabla, R, Li, M.C, Junop, M.S.
Deposit date:2023-08-29
Release date:2023-09-06
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (4.28 Å)
Cite:DdrC, a unique DNA repair factor from D. radiodurans, senses and stabilizes DNA breaks through a novel lesion-recognition mechanism.
Nucleic Acids Res., 52, 2024
8U1J
DownloadVisualize
BU of 8u1j by Molmil
N-Terminal domain of DNA-Damage Response Protein C (DdrC) from Deinococcus radiodurans - Crystal form xMJ7102
Descriptor: DNA damage response protein C
Authors:Szabla, R, Song, Y, Junop, M.S.
Deposit date:2023-09-01
Release date:2023-09-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:DdrC, a unique DNA repair factor from D. radiodurans, senses and stabilizes DNA breaks through a novel lesion-recognition mechanism.
Nucleic Acids Res., 52, 2024
3L1U
DownloadVisualize
BU of 3l1u by Molmil
Crystal structure of Calcium-bound GmhB from E. coli.
Descriptor: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, ZINC ION
Authors:Sugiman-Marangos, S.N, Junop, M.S.
Deposit date:2009-12-14
Release date:2010-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and kinetic characterization of the LPS biosynthetic enzyme D-alpha,beta-D-heptose-1,7-bisphosphate phosphatase (GmhB) from Escherichia coli.
Biochemistry, 49, 2010
5UVR
DownloadVisualize
BU of 5uvr by Molmil
The core region of PilO from the type IV pilus system of Pseudomonas aeruginosa
Descriptor: PilO protein
Authors:Howell, P.L, Junop, M.S.
Deposit date:2017-02-20
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conserved, unstructured regions in Pseudomonas aeruginosa PilO are important for type IVa pilus function.
Sci Rep, 8, 2018
2ANQ
DownloadVisualize
BU of 2anq by Molmil
Crystal Structure of E.coli DHFR in complex with NADPH and the inhibitor compound 10a.
Descriptor: (2,5-dimethylbenzene-1,4-diyl)dimethanediyl bis(N-carbamimidoylcarbamimidothioate), Dihydrofolate reductase, MANGANESE (II) ION, ...
Authors:Summerfield, R.L, Daigle, D.M, Mayer, S, Jackson, S.G, Organ, M, Hughes, D.W, Brown, E.D, Junop, M.S.
Deposit date:2005-08-11
Release date:2006-07-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:A 2.13 A Structure of E. coli Dihydrofolate Reductase Bound to a Novel Competitive Inhibitor Reveals a New Binding Surface Involving the M20 Loop Region
J.Med.Chem., 49, 2006
2R9A
DownloadVisualize
BU of 2r9a by Molmil
Crystal structure of human XLF
Descriptor: Non-homologous end-joining factor 1
Authors:Andres, S.N, Junop, M.S.
Deposit date:2007-09-12
Release date:2008-01-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Human XLF: A Twist in Nonhomologous DNA End-Joining
Mol.Cell, 28
2OPT
DownloadVisualize
BU of 2opt by Molmil
Crystal Structure of Apo ActR from Streptomyces coelicolor.
Descriptor: ActII protein
Authors:Willems, A.R, Junop, M.S.
Deposit date:2007-01-30
Release date:2008-02-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of the Streptomyces coelicolor TetR-like protein ActR alone and in complex with actinorhodin or the actinorhodin biosynthetic precursor (S)-DNPA.
J.Mol.Biol., 376, 2008
7RUE
DownloadVisualize
BU of 7rue by Molmil
DAHP synthase complexed with trifluoropyruvate semicarbazone
Descriptor: (2E)-2-(2-carbamoylhydrazinylidene)-3,3,3-trifluoropropanoic acid, MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, ...
Authors:Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
Deposit date:2021-08-16
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
7RUD
DownloadVisualize
BU of 7rud by Molmil
DAHP synthase complex with trifluoropyruvate oxime
Descriptor: (2Z)-3,3,3-trifluoro-2-(hydroxyimino)propanoic acid, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive
Authors:Heimhalt, M, Mukherjee, P, Grainger, R, Szabla, R, Brown, C, Turner, R, Junop, M.S, Berti, P.J.
Deposit date:2021-08-16
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An Inhibitor-in-Pieces Approach to DAHP Synthase Inhibition: Potent Enzyme and Bacterial Growth Inhibition.
Acs Infect Dis., 7, 2021
1ZM0
DownloadVisualize
BU of 1zm0 by Molmil
Crystal Structure of the Carboxyl Terminal PH Domain of Pleckstrin To 2.1 Angstroms
Descriptor: Pleckstrin
Authors:Jackson, S.G, Zhang, Y, Zhang, K, Summerfield, R, Haslam, R.J, Junop, M.S.
Deposit date:2005-05-09
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the carboxy-terminal PH domain of pleckstrin at 2.1 Angstroms.
Acta Crystallogr.,Sect.D, 62, 2006
6MC8
DownloadVisualize
BU of 6mc8 by Molmil
Crystal structure of PprA dimer from Deinococcus deserti
Descriptor: DNA repair protein PprA
Authors:Szabla, R, Junop, M.S, Rok, M.
Deposit date:2018-08-30
Release date:2018-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of PprA from Deinococcus radiodurans
To Be Published
8E0Y
DownloadVisualize
BU of 8e0y by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with DAHP oxime, Pr(III), and Pi in unbound:(bound)2:other Conformations
Descriptor: ACETATE ION, CITRATE ANION, DAHP Oxime, ...
Authors:Berti, P.J, Junop, M.S, Grainger, R.
Deposit date:2022-08-09
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Role of Half-of-Sites Reactivity and Inter-Subunit Communications in DAHP Synthase Catalysis and Regulation.
Biochemistry, 61, 2022
6NEO
DownloadVisualize
BU of 6neo by Molmil
Crystal structure of PprA filament from Deinococcus radiodurans
Descriptor: DNA repair protein PprA
Authors:Szabla, R, Junop, M.S, Rok, M.
Deposit date:2018-12-18
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (5.94 Å)
Cite:Crystal structure of PprA filament from Deinococcus radiodurans
To Be Published
3RWR
DownloadVisualize
BU of 3rwr by Molmil
Crystal structure of the human XRCC4-XLF complex
Descriptor: DNA repair protein XRCC4, HEXATANTALUM DODECABROMIDE, Non-homologous end-joining factor 1
Authors:Andres, S.N, Junop, M.S.
Deposit date:2011-05-09
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.943 Å)
Cite:Structure of human XLF-XRCC4: assembly of a functional DNA repair complex
To be Published

 

1234>

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon