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PDB: 91 results

3ZS7
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BU of 3zs7 by Molmil
Crystal structure of pyridoxal kinase from Trypanosoma brucei
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, PYRIDOXAL KINASE
Authors:Alphey, M.S, Jones, D.C, Fairlamb, A.H.
Deposit date:2011-06-23
Release date:2012-06-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemical, Genetic and Structural Assessment of Pyridoxal Kinase as a Drug Target in the African Trypanosome.
Mol.Microbiol., 86, 2012
3HXG
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BU of 3hxg by Molmil
Crystal structure of Schistsome eIF4E complexed with m7GpppA and 4E-BP
Descriptor: Eukaryotic Translation Initiation Factor 4E, Eukaryotic translation initiation factor 4E-binding protein 1, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE
Authors:Liu, W, Zhao, R, Jones, D.N.M, Davis, R.E.
Deposit date:2009-06-20
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap.
J.Biol.Chem., 284, 2009
3HXI
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BU of 3hxi by Molmil
Crystal structure of Schistosome eIF4E complexed with m7GpppG and 4E-BP
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Eukaryotic Translation Initiation 4E, Eukaryotic translation initiation factor 4E-binding protein 1
Authors:Liu, W, Zhao, R, Jones, D.N.M, Davis, R.E.
Deposit date:2009-06-20
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into parasite EIF4E binding specificity for m7G and m2,2,7G mRNA cap.
J.Biol.Chem., 284, 2009
8TSE
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BU of 8tse by Molmil
Crystal structure of a CE15 glucuronoyl esterase from Ruminococcus flavefaciens
Descriptor: GLYCEROL, Multidomain esterase
Authors:Gruninger, R.J, Jones, D.R.
Deposit date:2023-08-11
Release date:2024-08-28
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural, Biochemical, and Phylogenetic Analysis of Bacterial and Fungal Carbohydrate Esterase Family 15 Glucuronoyl Esterases in the Rumen.
Protein J., 43, 2024
5ANS
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BU of 5ans by Molmil
Potent and selective inhibitors of MTH1 probe its role in cancer cell survival
Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Authors:Kettle, J.G, Alwan, H, Bista, M, Breed, J, Kack, H, Eckersley, K, Foote, K.M, Fillery, S, Goodwin, L, Jones, D, Lau, A, Nissink, J.W.M, Read, J, Scott, J, Taylor, B, Walker, G, Wissler, L.
Deposit date:2015-09-08
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
5ANT
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BU of 5ant by Molmil
Potent and selective inhibitors of MTH1 probe its role in cancer cell survival
Descriptor: 2-(2-methoxyethoxy)-6-(methylamino)-9-(phenylmethyl)-7H-purin-8-one, 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
Authors:Kettle, J.G, Alwan, H, Bista, M, Breed, J, Kack, H, Eckersley, K, Foote, K.M, Fillery, S, Goodwin, L, Jones, D, Lau, A, Nissink, J.W.M, Read, J, Scott, J, Taylor, B, Walker, G, Wissler, L.
Deposit date:2015-09-08
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent and Selective Inhibitors of Mth1 Probe its Role in Cancer Cell Survival.
J.Med.Chem., 59, 2016
3V2L
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BU of 3v2l by Molmil
Structure of Anopheles gambiae odorant binding protein 20 bound to polyethylene glycol
Descriptor: AGAP005208-PA, TETRAETHYLENE GLYCOL
Authors:Ziemba, B.P, Jones, D.N.
Deposit date:2011-12-12
Release date:2012-10-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel mechanism of ligand binding and release in the odorant binding protein 20 from the malaria mosquito Anopheles gambiae.
Protein Sci., 22, 2013
8TRU
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BU of 8tru by Molmil
Crystal structure of a CE15 from Fibrobacter succinogenes subsp. succinogenes S85
Descriptor: Glucuronyl esterase, ZINC ION
Authors:Gruninger, R.J, Jones, D.R.
Deposit date:2023-08-10
Release date:2024-08-28
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural, Biochemical, and Phylogenetic Analysis of Bacterial and Fungal Carbohydrate Esterase Family 15 Glucuronoyl Esterases in the Rumen.
Protein J., 43, 2024
8TRX
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BU of 8trx by Molmil
Crystal structure of a CE15 glucuronoyl esterase from Piromyces rhizinflatus
Descriptor: CE15 glucuronoyl esterase
Authors:Gruninger, R.J, Jones, D.R.
Deposit date:2023-08-10
Release date:2024-08-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural, Biochemical, and Phylogenetic Analysis of Bacterial and Fungal Carbohydrate Esterase Family 15 Glucuronoyl Esterases in the Rumen.
Protein J., 43, 2024
3VB1
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BU of 3vb1 by Molmil
Crystal Structure of Anopholes gambiae odorant binding protein 20 in open state
Descriptor: ACETIC ACID, AGAP005208-PA
Authors:Ziemba, B.P, Jones, D.N.
Deposit date:2011-12-30
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A novel mechanism of ligand binding and release in the odorant binding protein 20 from the malaria mosquito Anopheles gambiae.
Protein Sci., 22, 2013
7B4Q
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BU of 7b4q by Molmil
Structure of a cold active HSL family esterase reveals mechanisms of low temperature adaptation and substrate specificity
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Rizkallah, P.J, Jones, D.D, Noby, N, Auhim, H.
Deposit date:2020-12-02
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structure and in silico simulations of a cold-active esterase reveals its prime cold-adaptation mechanism.
Open Biology, 11, 2021
7T69
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BU of 7t69 by Molmil
Crystal structure of Avr3 (SIX1) from Fusarium oxysporum f. sp. lycopersici
Descriptor: Avr3 (SIX1), Secreted in xylem 1, SULFATE ION
Authors:Yu, D.S, Outram, M.A, Ericsson, D.J, Jones, D.A, Williams, S.J.
Deposit date:2021-12-13
Release date:2023-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The structural repertoire of Fusarium oxysporum f. sp. lycopersici effectors revealed by experimental and computational studies
Elife, 2023
7T6A
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BU of 7t6a by Molmil
Crystal structure of Avr1 (SIX4) from Fusarium oxysporum f. sp. lycopersici
Descriptor: Avr1 (FolSIX4), Avirulence protein 1, Avr1 (SIX4), ...
Authors:Yu, D.S, Outram, M.A, Ericsson, D.J, Jones, D.A, Williams, S.J.
Deposit date:2021-12-13
Release date:2023-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structural repertoire of Fusarium oxysporum f. sp. lycopersici effectors revealed by experimental and computational studies
Elife, 2023
3U8P
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BU of 3u8p by Molmil
Cytochrome b562 integral fusion with EGFP
Descriptor: Cytochrome b562 integral fusion with enhanced green fluorescent protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Arpino, J, Czapinska, H, Piasecka, A, Edwards, W.R, Barker, P, Gajda, M, Bochtler, M, Jones, D.D.
Deposit date:2011-10-17
Release date:2012-08-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for efficient chromophore communication and energy transfer in a constructed didomain protein scaffold.
J.Am.Chem.Soc., 134, 2012
6O9Y
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BU of 6o9y by Molmil
Structure of human PARG complexed with JA2-8
Descriptor: 7-[(2S)-2-hydroxy-3-(morpholin-4-yl)propyl]-1,3-dimethyl-3,7-dihydro-1H-purine-2,6-dione, Poly(ADP-ribose) glycohydrolase
Authors:Stegeman, R.A, Jones, D.E, Ellenberger, T, Kim, I.K, Tainer, J.A.
Deposit date:2019-03-15
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019
6OA3
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BU of 6oa3 by Molmil
Structure of human PARG complexed with JA2131
Descriptor: (8S)-1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]sulfanyl}-6-sulfanylidene-1,3,6,7,8,9-hexahydro-2H-purin-2-one, Poly(ADP-ribose) glycohydrolase
Authors:Stegeman, R.A, Jones, D.E, Ellenberger, T, Kim, I.K, Tainer, J.A.
Deposit date:2019-03-15
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019
6OA0
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BU of 6oa0 by Molmil
Structure of human PARG complexed with JA2-9
Descriptor: 4-(1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)butanoic acid, Poly(ADP-ribose) glycohydrolase
Authors:Stegeman, R.A, Jones, D.E, Ellenberger, T, Kim, I.K, Tainer, J.A.
Deposit date:2019-03-15
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019
6SM0
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BU of 6sm0 by Molmil
Venus 66 p-Azido-L-Phenylalanin (azF) variant, dark grown
Descriptor: Green fluorescent protein, OXYGEN MOLECULE, SULFATE ION, ...
Authors:Rizkallah, P.J, Al Maslookhi, H.S, Jones, D.D.
Deposit date:2019-08-21
Release date:2021-02-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Stalling chromophore synthesis of the fluorescent protein Venus reveals the molecular basis of the final oxidation step.
Chem Sci, 12, 2021
8BXP
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BU of 8bxp by Molmil
SfGFP C148 F206 mutant
Descriptor: Green fluorescent protein
Authors:Ahmed, R.D, Rizkallah, P.J, Jones, D.D.
Deposit date:2022-12-09
Release date:2023-12-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:SfGFP C148 F206 mutant
To Be Published
8C1X
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BU of 8c1x by Molmil
sfGFP C148 F206 mutant
Descriptor: Green fluorescent protein
Authors:Ahmed, R.D, Rizkallah, P.J, Jones, D.D.
Deposit date:2022-12-21
Release date:2024-01-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:sfGFP C148 F206 mutant
To Be Published
4J89
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BU of 4j89 by Molmil
Different photochemical events of a genetically encoded aryl azide define and modulate GFP fluorescence
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-06-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
4J88
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BU of 4j88 by Molmil
Dark-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 66
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-06-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
4J8A
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BU of 4j8a by Molmil
Irradiated-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 145
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-05-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
6O9X
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BU of 6o9x by Molmil
Structure of human PARG complexed with JA2-4
Descriptor: 1,3-dimethyl-8-{[2-(pyrrolidin-1-yl)ethyl]sulfanyl}-6-sulfanylidene-1,3,6,9-tetrahydro-2H-purin-2-one, Poly(ADP-ribose) glycohydrolase
Authors:Stegeman, R.A, Jones, D.E, Ellenberger, T, Kim, I.K, Tainer, J.A.
Deposit date:2019-03-15
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019
6OA1
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BU of 6oa1 by Molmil
Structure of human PARG complexed with JA2120
Descriptor: 1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]sulfanyl}-3,7-dihydro-1H-purine-2,6-dione, Poly(ADP-ribose) glycohydrolase
Authors:Stegeman, R.A, Jones, D.E, Ellenberger, T, Kim, I.K, Tainer, J.A.
Deposit date:2019-03-15
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Selective small molecule PARG inhibitor causes replication fork stalling and cancer cell death.
Nat Commun, 10, 2019

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