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PDB: 55 results

8AAY
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BU of 8aay by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): small class from symmetry expansion
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-07-04
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Decoding virus maturation with cryo-EM structures of intermediates
To be published
8ACH
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BU of 8ach by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): large class from symmetry expansion
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-07-05
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Decoding virus maturation with cryo-EM structures of intermediates
To be published
8A6J
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BU of 8a6j by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs)
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-06-17
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Decoding virus maturation with cryo-EM structures of intermediates
To be published
8AC6
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BU of 8ac6 by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): medium class from symmetry expansion
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-07-05
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Decoding virus maturation with cryo-EM structures of intermediates
To be published
1F8V
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BU of 1f8v by Molmil
THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA
Descriptor: CALCIUM ION, MATURE CAPSID PROTEIN BETA, MATURE CAPSID PROTEIN GAMMA, ...
Authors:Tang, L, Johnson, K.N, Ball, L.A, Lin, T, Yeager, M, Johnson, J.E.
Deposit date:2000-07-05
Release date:2000-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA.
Nat.Struct.Biol., 8, 2001
1B35
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BU of 1b35 by Molmil
CRICKET PARALYSIS VIRUS (CRPV)
Descriptor: PROTEIN (CRICKET PARALYSIS VIRUS, VP1), VP2), ...
Authors:Tate, J.G, Liljas, L, Scotti, P.D, Christian, P.D, Lin, T.W, Johnson, J.E.
Deposit date:1998-12-17
Release date:1999-08-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of cricket paralysis virus: the first view of a new virus family.
Nat.Struct.Biol., 6, 1999
1BMV
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BU of 1bmv by Molmil
PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION
Descriptor: PROTEIN (ICOSAHEDRAL VIRUS - A DOMAIN), PROTEIN (ICOSAHEDRAL VIRUS - B AND C DOMAIN), RNA (5'-R(*GP*GP*UP*CP*AP*AP*AP*AP*UP*GP*C)-3')
Authors:Chen, Z, Stauffacher, C, Li, Y, Schmidt, T, Bomu, W, Kamer, G, Shanks, M, Lomonossoff, G, Johnson, J.E.
Deposit date:1989-10-09
Release date:1989-10-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Protein-RNA interactions in an icosahedral virus at 3.0 A resolution.
Science, 245, 1989
1PEH
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BU of 1peh by Molmil
NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
Descriptor: PEPNH1
Authors:Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
Deposit date:1996-06-10
Release date:1996-12-07
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1PGL
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BU of 1pgl by Molmil
BEAN POD MOTTLE VIRUS (BPMV), MIDDLE COMPONENT
Descriptor: 5'-R(*AP*GP*UP*CP*UP*C)-3', BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
Authors:Lin, T, Cavarelli, J, Johnson, J.E.
Deposit date:2003-05-28
Release date:2003-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PGW
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BU of 1pgw by Molmil
BEAN POD MOTTLE VIRUS (BPMV), TOP COMPONENT
Descriptor: BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
Authors:Lin, T, Cavarelli, J, Johnson, J.E.
Deposit date:2003-05-28
Release date:2003-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PEI
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BU of 1pei by Molmil
NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
Descriptor: PEPC22
Authors:Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
Deposit date:1996-06-10
Release date:1996-12-07
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1NY7
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BU of 1ny7 by Molmil
COWPEA MOSAIC VIRUS (CPMV)
Descriptor: COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT, SMALL (S) SUBUNIT
Authors:Lin, T, Chen, Z, Usha, R, Stauffacher, C.V, Dai, J.-B, Schmidt, T, Johnson, J.E.
Deposit date:2003-02-11
Release date:2003-03-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Refined Crystal Structure of Cowpea Mosaic Virus at 2.8A Resolution
Virology, 265, 1999
1IF0
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BU of 1if0 by Molmil
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
Descriptor: PROTEIN (MAJOR CAPSID PROTEIN GP5)
Authors:Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
Deposit date:2001-04-11
Release date:2001-05-02
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
1M1C
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BU of 1m1c by Molmil
Structure of the L-A virus
Descriptor: Major coat protein
Authors:Naitow, H, Tang, J, Canady, M, Wickner, R.B, Johnson, J.E.
Deposit date:2002-06-18
Release date:2002-10-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.
Nat.Struct.Biol., 9, 2002
3IYI
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BU of 3iyi by Molmil
P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
Descriptor: P22 coat protein in procapsid shells
Authors:Parent, K.N, Khayat, R, Tu, L.H, Suhanovsky, M.M, Cortines, J.R, Teschke, C.M, Johnson, J.E, Baker, T.S.
Deposit date:2009-12-14
Release date:2010-03-31
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
3IYH
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BU of 3iyh by Molmil
P22 procapsid coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
Descriptor: Coat protein
Authors:Parent, K.N, Khayat, R, Tu, L.H, Suhanovsky, M.M, Cortines, J.R, Teschke, C.M, Johnson, J.E, Baker, T.S.
Deposit date:2009-12-14
Release date:2010-03-31
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
3J31
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BU of 3j31 by Molmil
Life in the extremes: atomic structure of Sulfolobus Turreted Icosahedral Virus
Descriptor: A223 penton base, A55 membrane protein, C381 turret protein, ...
Authors:Veesler, D, Ng, T.S, Sendamarai, A.K, Eilers, B.J, Lawrence, C.M, Lok, S.M, Young, M.J, Johnson, J.E, Fu, C.-Y.
Deposit date:2013-02-18
Release date:2013-05-01
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 110, 2013
1ZA7
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BU of 1za7 by Molmil
The crystal structure of salt stable cowpea cholorotic mottle virus at 2.7 angstroms resolution.
Descriptor: Coat protein
Authors:Bothner, B, Speir, J.A, Qu, C, Willits, D.A, Young, M.J, Johnson, J.E.
Deposit date:2005-04-05
Release date:2006-03-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enhanced local symmetry interactions globally stabilize a mutant virus capsid that maintains infectivity and capsid dynamics.
J.Virol., 80, 2006
1F2N
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BU of 1f2n by Molmil
RICE YELLOW MOTTLE VIRUS
Descriptor: CALCIUM ION, CAPSID PROTEIN
Authors:Qu, C, Liljas, L, Opalka, N, Brugidou, C, Yeager, M, Beachy, R.N, Fauquet, C.M, Johnson, J.E, Lin, T.
Deposit date:2000-05-26
Release date:2000-11-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:3D domain swapping modulates the stability of members of an icosahedral virus group.
Structure Fold.Des., 8, 2000
2XNY
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BU of 2xny by Molmil
A fragment of streptococcal M1 protein in complex with human fibrinogen
Descriptor: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ...
Authors:Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P.
Deposit date:2010-08-06
Release date:2011-04-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
2XNX
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BU of 2xnx by Molmil
BC1 fragment of streptococcal M1 protein in complex with human fibrinogen
Descriptor: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ...
Authors:Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P.
Deposit date:2010-08-06
Release date:2011-04-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
2FTE
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BU of 2fte by Molmil
Bacteriophage HK97 Expansion Intermediate IV
Descriptor: major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-24
Release date:2006-02-07
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2BBV
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BU of 2bbv by Molmil
THE REFINED THREE-DIMENSIONAL STRUCTURE OF AN INSECT VIRUS AT 2.8 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, PROTEIN (BLACK BEETLE VIRUS CAPSID PROTEIN), RNA (5'-R(*UP*CP*UP*UP*AP*UP*AP*UP*CP*U)-3')
Authors:Wery, J.-P, Reddy, V.S, Hosur, M.V, Johnson, J.E.
Deposit date:1994-06-06
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The refined three-dimensional structure of an insect virus at 2.8 A resolution.
J.Mol.Biol., 235, 1994
2FT1
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BU of 2ft1 by Molmil
Bacteriophage HK97 Head II
Descriptor: major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-23
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FS3
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BU of 2fs3 by Molmil
Bacteriophage HK97 K169Y Head I
Descriptor: Major capsid protein
Authors:Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
Deposit date:2006-01-20
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006

227561

数据于2024-11-20公开中

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