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PDB: 55 件

3E8K
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Crystal structure of HK97 Prohead II
分子名称: Major capsid protein
著者Gertsman, I, Speir, J, Johnson, J.E.
登録日2008-08-20
公開日2009-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献An unexpected twist in viral capsid maturation.
Nature, 458, 2009
1NOV
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NODAMURA VIRUS
分子名称: NODAMURA VIRUS COAT PROTEINS
著者Natarajan, P, Johnson, J.E.
登録日1997-09-16
公開日1998-01-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Resolution of space-group ambiguity and structure determination of nodamura virus to 3.3 A resolution from pseudo-R32 (monoclinic) crystals.
Acta Crystallogr.,Sect.D, 53, 1997
1F8V
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THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA
分子名称: CALCIUM ION, MATURE CAPSID PROTEIN BETA, MATURE CAPSID PROTEIN GAMMA, ...
著者Tang, L, Johnson, K.N, Ball, L.A, Lin, T, Yeager, M, Johnson, J.E.
登録日2000-07-05
公開日2000-12-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA.
Nat.Struct.Biol., 8, 2001
2BBV
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THE REFINED THREE-DIMENSIONAL STRUCTURE OF AN INSECT VIRUS AT 2.8 ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, PROTEIN (BLACK BEETLE VIRUS CAPSID PROTEIN), RNA (5'-R(*UP*CP*UP*UP*AP*UP*AP*UP*CP*U)-3')
著者Wery, J.-P, Reddy, V.S, Hosur, M.V, Johnson, J.E.
登録日1994-06-06
公開日1994-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The refined three-dimensional structure of an insect virus at 2.8 A resolution.
J.Mol.Biol., 235, 1994
1OHG
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STRUCTURE OF THE DSDNA BACTERIOPHAGE HK97 MATURE EMPTY CAPSID
分子名称: CHLORIDE ION, MAJOR CAPSID PROTEIN, SULFATE ION
著者Helgstrand, C, Wikoff, W.R, Duda, R.L, Hendrix, R.W, Johnson, J.E, Liljas, L.
登録日2003-05-26
公開日2003-12-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献The Refined Structure of a Protein Catenane: The Hk97 Bacteriophage Capsid at 3.44A Resolution
J.Mol.Biol., 334, 2003
1ZA7
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The crystal structure of salt stable cowpea cholorotic mottle virus at 2.7 angstroms resolution.
分子名称: Coat protein
著者Bothner, B, Speir, J.A, Qu, C, Willits, D.A, Young, M.J, Johnson, J.E.
登録日2005-04-05
公開日2006-03-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Enhanced local symmetry interactions globally stabilize a mutant virus capsid that maintains infectivity and capsid dynamics.
J.Virol., 80, 2006
1M1C
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Structure of the L-A virus
分子名称: Major coat protein
著者Naitow, H, Tang, J, Canady, M, Wickner, R.B, Johnson, J.E.
登録日2002-06-18
公開日2002-10-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.
Nat.Struct.Biol., 9, 2002
1OHF
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The refined structure of Nudaurelia capensis omega virus
分子名称: MAGNESIUM ION, p70
著者Helgstrand, C, Munshi, S, Johnson, J.E, Liljas, L.
登録日2003-05-26
公開日2004-02-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Refined Structure of Nudaurelia Capensis Omega Virus Reveals Control Elements for a T = 4 Capsid Maturation
Virology, 318, 2004
3IYI
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P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
分子名称: P22 coat protein in procapsid shells
著者Parent, K.N, Khayat, R, Tu, L.H, Suhanovsky, M.M, Cortines, J.R, Teschke, C.M, Johnson, J.E, Baker, T.S.
登録日2009-12-14
公開日2010-03-31
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
3J31
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Life in the extremes: atomic structure of Sulfolobus Turreted Icosahedral Virus
分子名称: A223 penton base, A55 membrane protein, C381 turret protein, ...
著者Veesler, D, Ng, T.S, Sendamarai, A.K, Eilers, B.J, Lawrence, C.M, Lok, S.M, Young, M.J, Johnson, J.E, Fu, C.-Y.
登録日2013-02-18
公開日2013-05-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 110, 2013
1B35
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CRICKET PARALYSIS VIRUS (CRPV)
分子名称: PROTEIN (CRICKET PARALYSIS VIRUS, VP1), VP2), ...
著者Tate, J.G, Liljas, L, Scotti, P.D, Christian, P.D, Lin, T.W, Johnson, J.E.
登録日1998-12-17
公開日1999-08-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of cricket paralysis virus: the first view of a new virus family.
Nat.Struct.Biol., 6, 1999
3IYH
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P22 procapsid coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
分子名称: Coat protein
著者Parent, K.N, Khayat, R, Tu, L.H, Suhanovsky, M.M, Cortines, J.R, Teschke, C.M, Johnson, J.E, Baker, T.S.
登録日2009-12-14
公開日2010-03-31
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
1BMV
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PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION
分子名称: PROTEIN (ICOSAHEDRAL VIRUS - A DOMAIN), PROTEIN (ICOSAHEDRAL VIRUS - B AND C DOMAIN), RNA (5'-R(*GP*GP*UP*CP*AP*AP*AP*AP*UP*GP*C)-3')
著者Chen, Z, Stauffacher, C, Li, Y, Schmidt, T, Bomu, W, Kamer, G, Shanks, M, Lomonossoff, G, Johnson, J.E.
登録日1989-10-09
公開日1989-10-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Protein-RNA interactions in an icosahedral virus at 3.0 A resolution.
Science, 245, 1989
1IF0
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PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
分子名称: PROTEIN (MAJOR CAPSID PROTEIN GP5)
著者Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
登録日2001-04-11
公開日2001-05-02
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
1PEH
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NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
分子名称: PEPNH1
著者Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
登録日1996-06-10
公開日1996-12-07
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1PGL
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BEAN POD MOTTLE VIRUS (BPMV), MIDDLE COMPONENT
分子名称: 5'-R(*AP*GP*UP*CP*UP*C)-3', BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
著者Lin, T, Cavarelli, J, Johnson, J.E.
登録日2003-05-28
公開日2003-11-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PGW
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BEAN POD MOTTLE VIRUS (BPMV), TOP COMPONENT
分子名称: BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
著者Lin, T, Cavarelli, J, Johnson, J.E.
登録日2003-05-28
公開日2003-11-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PEI
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NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
分子名称: PEPC22
著者Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
登録日1996-06-10
公開日1996-12-07
最終更新日2018-03-14
実験手法SOLUTION NMR
主引用文献Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1NY7
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COWPEA MOSAIC VIRUS (CPMV)
分子名称: COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT, SMALL (S) SUBUNIT
著者Lin, T, Chen, Z, Usha, R, Stauffacher, C.V, Dai, J.-B, Schmidt, T, Johnson, J.E.
登録日2003-02-11
公開日2003-03-18
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Refined Crystal Structure of Cowpea Mosaic Virus at 2.8A Resolution
Virology, 265, 1999
2QQP
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Crystal Structure of Authentic Providence Virus
分子名称: CALCIUM ION, RNA (5'-R(*UP*UP*UP*U)-3'), p81
著者Speir, J.A, Taylor, D.J, Johnson, J.E.
登録日2007-07-26
公開日2009-01-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Evolution in action: N and C termini of subunits in related T = 4 viruses exchange roles as molecular switches.
Structure, 18, 2010
1F2N
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RICE YELLOW MOTTLE VIRUS
分子名称: CALCIUM ION, CAPSID PROTEIN
著者Qu, C, Liljas, L, Opalka, N, Brugidou, C, Yeager, M, Beachy, R.N, Fauquet, C.M, Johnson, J.E, Lin, T.
登録日2000-05-26
公開日2000-11-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献3D domain swapping modulates the stability of members of an icosahedral virus group.
Structure Fold.Des., 8, 2000
2BFU
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X-ray structure of CPMV top component
分子名称: COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT, SMALL (S) SUBUNIT
著者Ochoa, W.F, Chatterji, A, Lin, T, Johnson, J.E.
登録日2004-12-13
公開日2005-01-12
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Generation and Structural Analysis of Reactive Empty Particles Derived from an Icosahedral Virus.
Chem.Biol., 13, 2006
2XNX
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BC1 fragment of streptococcal M1 protein in complex with human fibrinogen
分子名称: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ...
著者Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P.
登録日2010-08-06
公開日2011-04-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
2XNY
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A fragment of streptococcal M1 protein in complex with human fibrinogen
分子名称: FIBRINOGEN ALPHA CHAIN, FIBRINOGEN BETA CHAIN, FIBRINOGEN GAMMA CHAIN, ...
著者Macheboeuf, P, Y Fu, C, Zinkernagel, A.S, Johnson, J.E, Nizet, V, Ghosh, P.
登録日2010-08-06
公開日2011-04-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (7.5 Å)
主引用文献Streptococcal M1 Protein Constructs a Pathological Host Fibrinogen Network
Nature, 472, 2011
2FTE
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Bacteriophage HK97 Expansion Intermediate IV
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-24
公開日2006-02-07
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006

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