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PDB: 24 results

2NCT
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NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of hexafluoroisopropanol
Descriptor: Envelope glycoprotein gp41
Authors:Jimenez, M, Nieva, J.L, Rujas, E, Partida-Hanon, A, Bruix, M.
Deposit date:2016-04-14
Release date:2017-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for broad neutralization of HIV-1 through the molecular recognition of 10E8 helical epitope at the membrane interface.
Sci Rep, 6, 2016
2NCS
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NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of dodecylphosphocholine micelles
Descriptor: Envelope glycoprotein gp41
Authors:Jimenez, M, Nieva, J.L, Rujas, E, Partida-Hanon, A, Bruix, M.
Deposit date:2016-04-14
Release date:2017-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for broad neutralization of HIV-1 through the molecular recognition of 10E8 helical epitope at the membrane interface.
Sci Rep, 6, 2016
2MWT
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NMR structure of crotalicidin in DPC micelles
Descriptor: Cathelicidin-like peptide
Authors:Jimenez, M, Zamora-Carreras, H.
Deposit date:2014-11-24
Release date:2015-11-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Dissection of Crotalicidin, a Rattlesnake Venom Cathelicidin, Retrieves a Fragment with Antimicrobial and Antitumor Activity.
J.Med.Chem., 58, 2015
2KSS
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NMR structure of Myxococcus xanthus antirepressor CarS1
Descriptor: Carotenogenesis protein carS
Authors:Jimenez, M, Gonzalez, C, Padmanabhan, S, Leon, E, Navarro-Aviles, G, Elias-Arnanz, M.
Deposit date:2010-01-13
Release date:2010-05-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A bacterial antirepressor with SH3 domain topology mimics operator DNA in sequestering the repressor DNA recognition helix.
Nucleic Acids Res., 38, 2010
2LWJ
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NMR solution structure Myxoccoccus xanthus CdnL
Descriptor: Transcriptional regulator, CarD family
Authors:Jimenez, M, Padmanabhan, S, Mirassou, Y.
Deposit date:2012-08-01
Release date:2014-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014
2JML
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Solution structure of the N-terminal domain of CarA repressor
Descriptor: DNA BINDING DOMAIN/TRANSCRIPTIONAL REGULATOR
Authors:Jimenez, M, Padmanabhan, S, Gonzalez, C, Perez-Marin, M.C, Elias-Arnanz, M, Murillo, F.J, Rico, M.
Deposit date:2006-11-20
Release date:2007-02-13
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structural basis for operator and antirepressor recognition by Myxococcus xanthus CarA repressor.
Mol.Microbiol., 63, 2007
2JOI
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NMR solution structure of hypothetical protein TA0095 from Thermoplasma acidophilum
Descriptor: Hypothetical protein Ta0095
Authors:Jimenez, M, Leon, E, Santoro, J, Rico, M, Yee, A, Structural Genomics Consortium (SGC)
Deposit date:2007-03-13
Release date:2007-10-02
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Solution structure of the hypothetical protein TA0095 from Thermoplasma acidophilum: A novel superfamily with a two-layer sandwich architecture
Protein Sci., 16, 2007
2LQK
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NMR solution structure of the N-terminal domain of the CdnL protein from Thermus thermophilus
Descriptor: Transcriptional regulator
Authors:Jimenez, M, Padmanabhan, S.
Deposit date:2012-03-09
Release date:2012-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: N-terminal domain of Thermus thermophilus CdnL.
J.Biomol.Nmr, 53, 2012
5LTO
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Ligand binding domain of Pseudomonas aeruginosa PAO1 amino acid chemoreceptors PctB in complex with L-Gln
Descriptor: GLUTAMINE, GLYCEROL, Methyl-accepting chemotaxis protein PctB, ...
Authors:Gavira, J.A, Rico-Jimenez, M, Conejero-Muriel, M, Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.459 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
5LT9
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Ligand binding domain of Pseudomonas aeruginosa PAO1 amino acid chemoreceptors PctB in complex with L-Arg
Descriptor: ARGININE, GLYCEROL, Methyl-accepting chemotaxis protein PctB, ...
Authors:Gavira, J.A, Rico-Jimenez, M, Ortega, A, Conejero-Muriel, M, Zhulin, I, Krell, T.
Deposit date:2016-09-06
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
5T65
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-ILE
Descriptor: ACETATE ION, ISOLEUCINE, Methyl-accepting chemotaxis protein PctA, ...
Authors:Gavira, J.A, Rico-Jimenez, M, Ortega, A, Conejero-Muriel, M, Zhulin, I, Krell, T.
Deposit date:2016-09-01
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
5T7M
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECEPTOR PCTA IN COMPLEX WITH L-TRP
Descriptor: ACETATE ION, Chemotaxis protein, SODIUM ION, ...
Authors:Gavira, J.A, Rico-Jimenez, M, Ortega, A, Conejero-Muriel, M, Zhulin, I, Krell, T.
Deposit date:2016-09-05
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
2C5R
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The structure of phage phi29 replication organizer protein p16.7 in complex with double stranded DNA
Descriptor: 5'-D(*CP*CP*GP*GP*TP*GP*GP*AP)-3', 5'-D(*TP*CP*CP*AP*CP*CP*GP*GP)-3', EARLY PROTEIN P16.7
Authors:Albert, A, Jimenez, M, Munoz-Espin, D, Asensio, J.L, Hermoso, J.A, Salas, M, Meijer, W.J.J.
Deposit date:2005-10-31
Release date:2005-11-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for Membrane Anchorage of Viral Phi 29 DNA During Replication.
J.Biol.Chem., 280, 2005
5LTV
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LIGAND BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA PAO1 AMINO ACID CHEMORECPETOR PCTC IN COMPLEX WITH GABA
Descriptor: ACETATE ION, Chemotactic transducer PctC, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Gavira, J.A, Rico-Jimenez, M, Conejero-Muriel, M, Krell, T.
Deposit date:2016-09-07
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Mbio, 2020
7QEK
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BU of 7qek by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-piruvic acid (IPA).
Descriptor: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, MAGNESIUM ION, regulator AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
7QEJ
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BU of 7qej by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-acetic acid (IAA).
Descriptor: 1H-INDOL-3-YLACETIC ACID, MAGNESIUM ION, TRANSCRIPTIONAL REGULATOR AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
2KB5
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Solution NMR Structure of Eosinophil Cationic Protein/RNase 3
Descriptor: Eosinophil cationic protein
Authors:Rico, M, Bruix, M, Laurents, D.V, Santoro, J, Jimenez, M, Boix, E, Moussaoui, M, Nogues, M.
Deposit date:2008-11-20
Release date:2009-06-23
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:The (1)H, (13)C, (15)N resonance assignment, solution structure, and residue level stability of eosinophil cationic protein/RNase 3 determined by NMR spectroscopy
Biopolymers, 91, 2009
2JW4
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BU of 2jw4 by Molmil
NMR solution structure of the N-terminal SH3 domain of human Nckalpha
Descriptor: Cytoplasmic protein NCK1
Authors:Santiveri, C.M, Borroto, A, Simon, L, Rico, M, Ortiz, A.R, Alarcon, B, Jimenez, M.
Deposit date:2007-10-05
Release date:2008-08-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Interaction between the N-terminal SH3 domain of Nckalpha and CD3epsilon-derived peptides: Non-canonical and canonical recognition motifs
BIOCHEM.BIOPHYS.ACTA PROTEINS & PROTEOMICS, 1794, 2009
2IZ5
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BU of 2iz5 by Molmil
FUNCTION AND STRUCTURE OF THE MOLYBDENUM COFACTOR CARRIER PROTEIN MCP FROM CHLAMYDOMONAS REINHARDTII
Descriptor: MOCO CARRIER PROTEIN
Authors:Fischer, K, Llamas, A, Tejada-Jimenez, M, Schrader, N, Kuper, J, Mendel, R.R, Fernandez, E, Schwarz, G.
Deposit date:2006-07-25
Release date:2006-07-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Function and Structure of the Molybdenum Cofactor Carrier Protein from Chlamydomonas Reinhardtii.
J.Biol.Chem., 281, 2006
2IZ7
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BU of 2iz7 by Molmil
structure of Moco Carrier Protein from Chlamydomonas reinhardtii
Descriptor: MOCO CARRIER PROTEIN
Authors:Fischer, K, Llamas, A, Tejada-Jimenez, M, Schrader, N, Kuper, J, Mendel, R.R, Fernandez, E, Schwarz, G.
Deposit date:2006-07-25
Release date:2006-07-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Function and Structure of the Molybdenum Cofactor Carrier Protein from Chlamydomonas Reinhardtii.
J.Biol.Chem., 281, 2006
2IZ6
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Structure of the Chlamydomonas rheinhardtii Moco Carrier Protein
Descriptor: MOLYBDENUM COFACTOR CARRIER PROTEIN
Authors:Fischer, K, Llamas, A, Tejada-Jimenez, M, Schrader, N, Kuper, J, Mendel, R.R, Fernandez, E, Schwarz, G.
Deposit date:2006-07-25
Release date:2006-07-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Function and Structure of the Molybdenum Cofactor Carrier Protein from Chlamydomonas Reinhardtii.
J.Biol.Chem., 281, 2006
2M8O
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NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in DPC
Descriptor: Transmembrane protein gp41
Authors:Serrano, S, Huarte, N, Nieva, J.L, Jimenez, M.
Deposit date:2013-05-23
Release date:2014-01-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Immunogenicity of a Peptide Vaccine, Including the Complete HIV-1 gp41 2F5 Epitope: IMPLICATIONS FOR ANTIBODY RECOGNITION MECHANISM AND IMMUNOGEN DESIGN.
J.Biol.Chem., 289, 2014
2M8M
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NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of hexafluoroisopropanol
Descriptor: Transmembrane protein gp41
Authors:Serrano, S, Huarte, N, Nieva, J.L, Jimenez, M.
Deposit date:2013-05-23
Release date:2014-01-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Immunogenicity of a Peptide Vaccine, Including the Complete HIV-1 gp41 2F5 Epitope: IMPLICATIONS FOR ANTIBODY RECOGNITION MECHANISM AND IMMUNOGEN DESIGN.
J.Biol.Chem., 289, 2014
2M3H
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Structure of Dido PHD domain
Descriptor: Death-inducer obliterator 1, ZINC ION
Authors:Santiveri, C.M, Perez-Canadillas, J.M, Jimenez, M.
Deposit date:2013-01-19
Release date:2013-08-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: PHD domain from death inducer obliterator protein and its interaction with H3K4me3.
J.Biomol.Nmr, 56, 2013

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