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PDB: 51 results

2UV8
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BU of 2uv8 by Molmil
Crystal structure of yeast fatty acid synthase with stalled acyl carrier protein at 3.1 angstrom resolution
Descriptor: FATTY ACID SYNTHASE SUBUNIT ALPHA (FAS2), FATTY ACID SYNTHASE SUBUNIT BETA (FAS1), FLAVIN MONONUCLEOTIDE
Authors:Leibundgut, M, Jenni, S, Frick, C, Ban, N.
Deposit date:2007-03-09
Release date:2007-04-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Substrate Delivery by Acyl Carrier Protein in the Yeast Fatty Acid Synthase
Science, 316, 2007
6WXF
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BU of 6wxf by Molmil
Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Intermediate conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Herrmann, T, Harrison, S.C, Jenni, S.
Deposit date:2020-05-10
Release date:2021-01-20
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Functional refolding of the penetration protein on a non-enveloped virus.
Nature, 590, 2021
6WXG
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BU of 6wxg by Molmil
Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Reversed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Herrmann, T, Harrison, S.C, Jenni, S.
Deposit date:2020-05-10
Release date:2021-01-20
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Functional refolding of the penetration protein on a non-enveloped virus.
Nature, 590, 2021
6WXE
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BU of 6wxe by Molmil
Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Upright conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Herrmann, T, Harrison, S.C, Jenni, S.
Deposit date:2020-05-10
Release date:2021-01-20
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Functional refolding of the penetration protein on a non-enveloped virus.
Nature, 590, 2021
5A22
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BU of 5a22 by Molmil
Structure of the L protein of vesicular stomatitis virus from electron cryomicroscopy
Descriptor: VESICULAR STOMATITIS VIRUS L POLYMERASE, ZINC ION
Authors:Liang, B, Li, Z, Jenni, S, Rameh, A.A, Morin, B.M, Grant, T, Grigorieff, N, Harrison, S.C, Whelan, S.P.J.
Deposit date:2015-05-06
Release date:2015-08-19
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the L Protein of Vesicular Stomatitis Virus from Electron Cryomicroscopy.
Cell(Cambridge,Mass.), 162, 2015
4TQC
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BU of 4tqc by Molmil
The co-complex structure of the translation initiation factor eIF4E with the inhibitor 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G
Descriptor: (2S)-3-(4-amino-3-nitrophenyl)-2-{2-[4-(3,4-dichlorophenyl)-1,3-thiazol-2-yl]hydrazinyl}propanoic acid, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Eukaryotic translation initiation factor 4E
Authors:Papadopoulos, E, Jenni, S, Wagner, G.
Deposit date:2014-06-10
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the eukaryotic translation initiation factor eIF4E in complex with 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TPW
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BU of 4tpw by Molmil
The co-complex structure of the translation initiation factor eIF4E with the inhibitor 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G
Descriptor: (2E)-2-{2-[4-(3,4-dichlorophenyl)-1,3-thiazol-2-yl]hydrazinylidene}-3-(2-nitrophenyl)propanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Papadopoulos, E, Jenni, S, Wagner, G.
Deposit date:2014-06-09
Release date:2014-08-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the eukaryotic translation initiation factor eIF4E in complex with 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TQB
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BU of 4tqb by Molmil
The co-complex structure of the translation initiation factor eIF4E with the inhibitor 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G
Descriptor: (2E)-2-{2-[4-(4-bromophenyl)-1,3-thiazol-2-yl]hydrazinylidene}-3-(2-nitrophenyl)propanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Papadopoulos, E, Jenni, S, Wagner, G.
Deposit date:2014-06-10
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structure of the eukaryotic translation initiation factor eIF4E in complex with 4EGI-1 reveals an allosteric mechanism for dissociating eIF4G.
Proc.Natl.Acad.Sci.USA, 111, 2014
8G0P
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BU of 8g0p by Molmil
Crystal structure of the human Ndc80:Nuf2 loop region
Descriptor: Kinetochore protein NDC80 homolog, Kinetochore protein Nuf2
Authors:Zahm, J.A, Jenni, S, Harrison, S.C.
Deposit date:2023-02-01
Release date:2023-03-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Ndc80 complex and its interactions at the yeast kinetochore-microtubule interface.
Open Biology, 13, 2023
8G0Q
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BU of 8g0q by Molmil
Crystal structure of the yeast Ndc80:Nuf2 head region with a bound Dam1 segment
Descriptor: DASH complex subunit DAM1,Kinetochore protein NUF2, Kinetochore protein NDC80
Authors:Zahm, J.A, Jenni, S, Harrison, S.C.
Deposit date:2023-02-01
Release date:2023-03-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Structure of the Ndc80 complex and its interactions at the yeast kinetochore-microtubule interface.
Open Biology, 13, 2023
8UK3
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BU of 8uk3 by Molmil
The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2+ (class 6 reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Outer capsid glycoprotein VP7, ...
Authors:De Sautu, M, Herrmann, T, Jenni, S, Harrison, S.C.
Deposit date:2023-10-12
Release date:2024-03-27
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (8 Å)
Cite:The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2.
Plos Pathog., 20, 2024
8UK2
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BU of 8uk2 by Molmil
The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2+ (class 5 reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Outer capsid glycoprotein VP7, ...
Authors:De Sautu, M, Herrmann, T, Jenni, S, Harrison, S.C.
Deposit date:2023-10-12
Release date:2024-03-27
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (8 Å)
Cite:The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2.
Plos Pathog., 20, 2024
2AKH
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BU of 2akh by Molmil
Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K.M, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
2AKI
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BU of 2aki by Molmil
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
2CF2
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BU of 2cf2 by Molmil
Architecture of mammalian fatty acid synthase
Descriptor: FATTY ACID SYNTHASE, DH DOMAIN, ER DOMAIN, ...
Authors:Maier, T, Jenni, S, Ban, N.
Deposit date:2006-02-14
Release date:2006-03-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Architecture of Mammalian Fatty Acid Synthase at 4.5 A Resolution.
Science, 311, 2006
5T6J
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BU of 5t6j by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: Kinetochore protein SPC24, Kinetochore protein SPC25, Kinetochore-associated protein DSN1
Authors:Valverde, R, Jenni, S, Dimitrova, Y, Khin, Y, Harrison, S.C.
Deposit date:2016-09-01
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5T51
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BU of 5t51 by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: KLLA0E05809p, KLLA0F02343p, SULFATE ION
Authors:Dimitrova, Y, Jenni, S, Valverde, R, Khin, Y, Harrison, S.C.
Deposit date:2016-08-30
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2007 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5T59
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BU of 5t59 by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, KLLA0B13629p, KLLA0E05809p, ...
Authors:Dimitrova, Y, Jenni, S, Valverde, R, Khin, Y, Harrison, S.C.
Deposit date:2016-08-30
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
7N64
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BU of 7n64 by Molmil
SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, G32R7 Fab heavy chain, ...
Authors:Windsor, I.W, Jenni, S, Tong, P, Gautam, A.K, Wesemann, D.R, Harrison, S.C.
Deposit date:2021-06-07
Release date:2021-08-04
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.
Biorxiv, 2021
7N62
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BU of 7n62 by Molmil
SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C12C9 Fab heavy chain, C12C9 Fab light chain, ...
Authors:Windsor, I.W, Jenni, S, Bajic, G, Tong, P, Gautam, A.K, Wesemann, D.R, Harrison, S.C.
Deposit date:2021-06-07
Release date:2021-08-04
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.
Biorxiv, 2021
5T58
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BU of 5t58 by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: KLLA0C15939p, KLLA0D15741p, KLLA0E05809p, ...
Authors:Dimitrova, Y, Jenni, S, Valverde, R, Khin, Y, Harrison, S.C.
Deposit date:2016-08-30
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.2131 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5UK2
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BU of 5uk2 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UJZ
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BU of 5ujz by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UK0
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BU of 5uk0 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UGY
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BU of 5ugy by Molmil
Influenza hemagglutinin in complex with a neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CH65 heavy chain, ...
Authors:Whittle, J.R.R, Jenni, S, Harrison, S.C.
Deposit date:2017-01-10
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011

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