Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 50 results

8UK3
DownloadVisualize
BU of 8uk3 by Molmil
The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2+ (class 6 reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Outer capsid glycoprotein VP7, ...
Authors:De Sautu, M, Herrmann, T, Jenni, S, Harrison, S.C.
Deposit date:2023-10-12
Release date:2024-03-27
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (8 Å)
Cite:The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2.
Plos Pathog., 20, 2024
2UV8
DownloadVisualize
BU of 2uv8 by Molmil
Crystal structure of yeast fatty acid synthase with stalled acyl carrier protein at 3.1 angstrom resolution
Descriptor: FATTY ACID SYNTHASE SUBUNIT ALPHA (FAS2), FATTY ACID SYNTHASE SUBUNIT BETA (FAS1), FLAVIN MONONUCLEOTIDE
Authors:Leibundgut, M, Jenni, S, Frick, C, Ban, N.
Deposit date:2007-03-09
Release date:2007-04-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Substrate Delivery by Acyl Carrier Protein in the Yeast Fatty Acid Synthase
Science, 316, 2007
6POD
DownloadVisualize
BU of 6pod by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PO3
DownloadVisualize
BU of 6po3 by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PO1
DownloadVisualize
BU of 6po1 by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6POS
DownloadVisualize
BU of 6pos by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
7N64
DownloadVisualize
BU of 7n64 by Molmil
SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, G32R7 Fab heavy chain, ...
Authors:Windsor, I.W, Jenni, S, Tong, P, Gautam, A.K, Wesemann, D.R, Harrison, S.C.
Deposit date:2021-06-07
Release date:2021-08-04
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.
Biorxiv, 2021
7N62
DownloadVisualize
BU of 7n62 by Molmil
SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C12C9 Fab heavy chain, C12C9 Fab light chain, ...
Authors:Windsor, I.W, Jenni, S, Bajic, G, Tong, P, Gautam, A.K, Wesemann, D.R, Harrison, S.C.
Deposit date:2021-06-07
Release date:2021-08-04
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.
Biorxiv, 2021
2AKI
DownloadVisualize
BU of 2aki by Molmil
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
2AKH
DownloadVisualize
BU of 2akh by Molmil
Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
Descriptor: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
Authors:Mitra, K.M, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
Deposit date:2005-08-03
Release date:2005-11-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14.9 Å)
Cite:Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
6PP7
DownloadVisualize
BU of 6pp7 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP5
DownloadVisualize
BU of 6pp5 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP8
DownloadVisualize
BU of 6pp8 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP6
DownloadVisualize
BU of 6pp6 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
2CF2
DownloadVisualize
BU of 2cf2 by Molmil
Architecture of mammalian fatty acid synthase
Descriptor: FATTY ACID SYNTHASE, DH DOMAIN, ER DOMAIN, ...
Authors:Maier, T, Jenni, S, Ban, N.
Deposit date:2006-02-14
Release date:2006-03-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Architecture of Mammalian Fatty Acid Synthase at 4.5 A Resolution.
Science, 311, 2006
6PPE
DownloadVisualize
BU of 6ppe by Molmil
ClpP and ClpX IGF loop in ClpX-ClpP complex with D7 symmetry
Descriptor: ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-06
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
5T6J
DownloadVisualize
BU of 5t6j by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: Kinetochore protein SPC24, Kinetochore protein SPC25, Kinetochore-associated protein DSN1
Authors:Valverde, R, Jenni, S, Dimitrova, Y, Khin, Y, Harrison, S.C.
Deposit date:2016-09-01
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5UK2
DownloadVisualize
BU of 5uk2 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UJZ
DownloadVisualize
BU of 5ujz by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UK0
DownloadVisualize
BU of 5uk0 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5UK1
DownloadVisualize
BU of 5uk1 by Molmil
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:Liu, Y, Pan, J, Caradonna, T, Jenni, S, Raymond, D.D, Schmidt, A.G, Harrison, S.C, Grigorieff, N.
Deposit date:2017-01-19
Release date:2017-05-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017
5T51
DownloadVisualize
BU of 5t51 by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: KLLA0E05809p, KLLA0F02343p, SULFATE ION
Authors:Dimitrova, Y, Jenni, S, Valverde, R, Khin, Y, Harrison, S.C.
Deposit date:2016-08-30
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2007 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5T59
DownloadVisualize
BU of 5t59 by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, KLLA0B13629p, KLLA0E05809p, ...
Authors:Dimitrova, Y, Jenni, S, Valverde, R, Khin, Y, Harrison, S.C.
Deposit date:2016-08-30
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5T58
DownloadVisualize
BU of 5t58 by Molmil
Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly
Descriptor: KLLA0C15939p, KLLA0D15741p, KLLA0E05809p, ...
Authors:Dimitrova, Y, Jenni, S, Valverde, R, Khin, Y, Harrison, S.C.
Deposit date:2016-08-30
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.2131 Å)
Cite:Structure of the MIND Complex Defines a Regulatory Focus for Yeast Kinetochore Assembly.
Cell, 167, 2016
5UGY
DownloadVisualize
BU of 5ugy by Molmil
Influenza hemagglutinin in complex with a neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CH65 heavy chain, ...
Authors:Whittle, J.R.R, Jenni, S, Harrison, S.C.
Deposit date:2017-01-10
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011
<12

 

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon