Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 211 results

2HHC
DownloadVisualize
BU of 2hhc by Molmil
Crystal structure of fucosyltransferase NodZ from Bradyrhizobium
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Nodulation fucosyltransferase NodZ, PHOSPHATE ION
Authors:Brzezinski, K, Stepkowski, T, Panjikar, S, Bujacz, G, Jaskolski, M.
Deposit date:2006-06-28
Release date:2007-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor.
Acta Biochim.Pol., 54, 2007
2HLH
DownloadVisualize
BU of 2hlh by Molmil
Crystal structure of fucosyltransferase NodZ from Bradyrhizobium
Descriptor: Nodulation fucosyltransferase, PHOSPHATE ION
Authors:Brzezinski, K, Stepkowski, T, Panjikar, S, Bujacz, G, Jaskolski, M.
Deposit date:2006-07-07
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor.
Acta Biochim.Pol., 54, 2007
8COL
DownloadVisualize
BU of 8col by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (orthorombic form R4oP-2)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imioloczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
Deposit date:2023-02-28
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023
8CLZ
DownloadVisualize
BU of 8clz by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (monoclinic form R4mC-2)
Descriptor: CHLORIDE ION, Putative L-asparaginase II protein, ZINC ION
Authors:Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imiolczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
Deposit date:2023-02-17
Release date:2023-08-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023
8CLY
DownloadVisualize
BU of 8cly by Molmil
Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (tetragonal form R4tP)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Putative L-asparaginase II protein, ...
Authors:Loch, J.I, Worsztynowicz, P, Sliwiak, J, Imiolczyk, B, Grzechowiak, M, Gilski, M, Jaskolski, M.
Deposit date:2023-02-17
Release date:2023-08-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Rhizobium etli has two L-asparaginases with low sequence identity but similar structure and catalytic center.
Acta Crystallogr D Struct Biol, 79, 2023
2NQD
DownloadVisualize
BU of 2nqd by Molmil
Crystal structure of cysteine protease inhibitor, chagasin, in complex with human cathepsin L
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Cathepsin L, ...
Authors:Redzynia, I, Bujacz, G, Ljunggren, A, Jaskolski, M, Abrahamson, M.
Deposit date:2006-10-31
Release date:2007-07-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the parasite protease inhibitor chagasin in complex with a host target cysteine protease
J.Mol.Biol., 371, 2007
4LVC
DownloadVisualize
BU of 4lvc by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine
Descriptor: ACETATE ION, ADENOSINE, AMMONIUM ION, ...
Authors:Manszewski, T, Singh, K, Imiolczyk, B, Jaskolski, M.
Deposit date:2013-07-26
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:An enzyme captured in two conformational states: crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii.
Acta Crystallogr.,Sect.D, 71, 2015
7OU1
DownloadVisualize
BU of 7ou1 by Molmil
Crystal structure of Rhizobium etli inducible L-asparaginase ReAV (monoclinic form MP2)
Descriptor: 1,2-ETHANEDIOL, L-asparaginase, ZINC ION
Authors:Imiolczyk, B, Loch, J.I, Gilski, M, Jaskolski, M.
Deposit date:2021-06-10
Release date:2021-11-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of the elusive Rhizobium etli L-asparaginase reveal a peculiar active site.
Nat Commun, 12, 2021
3C0V
DownloadVisualize
BU of 3c0v by Molmil
Crystal structure of cytokinin-specific binding protein in complex with cytokinin and Ta6Br12
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cytokinin-specific binding protein, ...
Authors:Pasternak, O, Bujacz, A, Biesiadka, J, Bujacz, G, Sikorski, M, Jaskolski, M.
Deposit date:2008-01-21
Release date:2008-05-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:MAD phasing using the (Ta(6)Br(12))(2+) cluster: a retrospective study
Acta Crystallogr.,Sect.D, 64, 2008
7ATG
DownloadVisualize
BU of 7atg by Molmil
Crystal structure of Z-DNA in complex with putrescinium and potassium cations at ultrahigh-resolution
Descriptor: 4-azaniumylbutylazanium, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), POTASSIUM ION
Authors:Drozdzal, P, Gilski, M, Jaskolski, M.
Deposit date:2020-10-30
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.6 Å)
Cite:Crystal structure of Z-DNA in complex with the polyamine putrescine and potassium cations at ultra-high resolution.
Acta Crystallogr.,Sect.B, 77, 2021
4YEM
DownloadVisualize
BU of 4yem by Molmil
Carboplatin binding to HEWL in NaBr crystallisation conditions studied at an X-ray wavelength of 0.9163A - new refinement
Descriptor: ACETATE ION, BROMIDE ION, CHLORIDE ION, ...
Authors:Shabalin, I.G, Dauter, Z, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2015-02-24
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.
Acta Crystallogr.,Sect.D, 71, 2015
1VSE
DownloadVisualize
BU of 1vse by Molmil
ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, LOW MG CONCENTRATION FORM
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, INTEGRASE
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-11-29
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The catalytic domain of avian sarcoma virus integrase: conformation of the active-site residues in the presence of divalent cations.
Structure, 4, 1996
1VSF
DownloadVisualize
BU of 1vsf by Molmil
ASV INTEGRASE CORE DOMAIN WITH MN(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, INTEGRASE, MANGANESE (II) ION
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-11-29
Release date:1996-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The catalytic domain of avian sarcoma virus integrase: conformation of the active-site residues in the presence of divalent cations.
Structure, 4, 1996
7QB6
DownloadVisualize
BU of 7qb6 by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with 3-carboxybenzophenone
Descriptor: 3-benzoylbenzoic acid, MALONATE ION, Nodulin-13
Authors:Grzechowiak, M, Ignasiak, M, Nowicka-Bauer, K, Marciniak, B, Jaskolski, M.
Deposit date:2021-11-18
Release date:2022-10-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Does the presence of ground state complex between a PR-10 protein and a sensitizer affect the mechanism of sensitized photo-oxidation?
Free Radic Biol Med, 198, 2023
1VSD
DownloadVisualize
BU of 1vsd by Molmil
ASV INTEGRASE CORE DOMAIN WITH MG(II) COFACTOR AND HEPES LIGAND, HIGH MG CONCENTRATION FORM
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, INTEGRASE, MAGNESIUM ION
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-11-29
Release date:1996-04-03
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The catalytic domain of avian sarcoma virus integrase: conformation of the active-site residues in the presence of divalent cations.
Structure, 4, 1996
3SIX
DownloadVisualize
BU of 3six by Molmil
Crystal structure of NodZ alpha-1,6-fucosyltransferase soaked with GDP-fucose
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, Nodulation fucosyltransferase NodZ, ...
Authors:Brzezinski, K, Dauter, Z, Jaskolski, M.
Deposit date:2011-06-20
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose
Acta Crystallogr.,Sect.D, 68, 2012
3SIW
DownloadVisualize
BU of 3siw by Molmil
Crystal structure of NodZ alpha-1,6-fucosyltransferase co-crystallized with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Nodulation fucosyltransferase NodZ, PHOSPHATE ION
Authors:Brzezinski, K, Dauter, Z, Jaskolski, M.
Deposit date:2011-06-20
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structures of NodZ alpha-1,6-fucosyltransferase in complex with GDP and GDP-fucose
Acta Crystallogr.,Sect.D, 68, 2012
4YEN
DownloadVisualize
BU of 4yen by Molmil
Room temperature X-ray diffraction studies of cisplatin binding to HEWL in DMSO media after 14 months of crystal storage - new refinement
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Shabalin, I.G, Dauter, Z, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2015-02-24
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.
Acta Crystallogr.,Sect.D, 71, 2015
4YEO
DownloadVisualize
BU of 4yeo by Molmil
Triclinic HEWL co-crystallised with cisplatin, studied at a data collection temperature of 150K - new refinement
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cisplatin, ...
Authors:Shabalin, I.G, Dauter, Z, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2015-02-24
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.
Acta Crystallogr.,Sect.D, 71, 2015
1ASW
DownloadVisualize
BU of 1asw by Molmil
AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 20% PEG 4000, 10% ISOPROPANOL, HEPES PH 7.5 USING SELENOMETHIONINE SUBSTITUTED PROTEIN; DATA COLLECTED AT-165 DEGREES C
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AVIAN SARCOMA VIRUS INTEGRASE, ISOPROPYL ALCOHOL
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-08-25
Release date:1995-11-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution structure of the catalytic domain of avian sarcoma virus integrase.
J.Mol.Biol., 253, 1995
1ASV
DownloadVisualize
BU of 1asv by Molmil
Avian sarcoma virus integrase catalytic core domain
Descriptor: AVIAN SARCOMA VIRUS INTEGRASE
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-08-25
Release date:1995-11-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-resolution structure of the catalytic domain of avian sarcoma virus integrase.
J.Mol.Biol., 253, 1995
1SP5
DownloadVisualize
BU of 1sp5 by Molmil
Crystal structure of HIV-1 protease complexed with a product of autoproteolysis
Descriptor: 5-mer peptide from Protease, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Vondrackova, E, Hasek, J, Jaskolski, M, Rezacova, P, Dohnalek, J, Skalova, T, Petrokova, H, Duskova, J, Brynda, J, Sedlacek, J.
Deposit date:2004-03-16
Release date:2005-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Product of enzymatic self-cleavage bound in the active site of HIV protease
To be Published
3US6
DownloadVisualize
BU of 3us6 by Molmil
Crystal Structure of Histidine-containing Phosphotransfer Protein MtHPt1 from Medicago truncatula
Descriptor: Histidine-containing Phosphotransfer Protein type 1, MtHPt1
Authors:Ruszkowski, M, Brzezinski, K, Jedrzejczak, R, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2011-11-23
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.446 Å)
Cite:Medicago truncatula histidine-containing phosphotransfer protein: Structural and biochemical insights into the cytokinin transduction pathway in plants.
Febs J., 280, 2013
1ASU
DownloadVisualize
BU of 1asu by Molmil
AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN CRYSTALLIZED FROM 2% PEG 400, 2M AMMONIUM SULFATE, HEPES PH 7.5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AVIAN SARCOMA VIRUS INTEGRASE
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-08-25
Release date:1995-11-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-resolution structure of the catalytic domain of avian sarcoma virus integrase.
J.Mol.Biol., 253, 1995
5C9Y
DownloadVisualize
BU of 5c9y by Molmil
Crystal structure of yellow lupine LlPR-10.1A protein partially saturated with trans-zeatin
Descriptor: Protein LlR18A
Authors:Sliwiak, J, Sikorski, M.M, Jaskolski, M.
Deposit date:2015-06-29
Release date:2015-12-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallographic and CD probing of ligand-induced conformational changes in a plant PR-10 protein.
J.Struct.Biol., 193, 2016

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon