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PDB: 115 件

3DGS
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Changing the determinants of protein stability from covalent to non-covalent interactions by in-vitro evolution: a structural and energetic analysis
分子名称: Coat protein A
著者Jakob, R.P, Kather, I, Dobbek, H, Schmid, F.X.
登録日2008-06-16
公開日2008-07-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Changing the determinants of protein stability from covalent to non-covalent interactions by in vitro evolution: a structural and energetic analysis.
J.Mol.Biol., 381, 2008
4WO7
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BU of 4wo7 by Molmil
Crystal Structure of PrsA from Bacillus subtilis
分子名称: Foldase protein PrsA
著者Jakob, R.P, Maier, T.
登録日2014-10-15
公開日2014-12-24
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Dimeric Structure of the Bacterial Extracellular Foldase PrsA.
J.Biol.Chem., 290, 2015
8CPQ
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BU of 8cpq by Molmil
Crystal structure of human protein disulfide isomerase PDIA6 domain b
分子名称: Protein disulfide-isomerase A6
著者Jakob, R.P, Leder, A.L, Hiller, S, Maier, T.
登録日2023-03-03
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of human protein disulfide isomerase PDIA6 domain b
To Be Published
5HST
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BU of 5hst by Molmil
Crystal structure of the dehydratase domain of MlnB from Bacillus amyloliquefaciens
分子名称: Polyketide synthase type I
著者Jakob, R.P, Dilmi, J, Hauswirth, P, Herbst, D.A, Maier, T.
登録日2016-01-26
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Dehydratase Domains from trans-AT Polyketide Biosynthetic Pathway
To Be Published
5I7P
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BU of 5i7p by Molmil
Crystal structure of Fkbp12-IF(SlyD), a chimeric protein of human Fkbp12 and the insert in flap domain of Ecoli SlyD
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A,FKBP-type peptidyl-prolyl cis-trans isomerase SlyD,Peptidyl-prolyl cis-trans isomerase FKBP1A
著者Jakob, R.P, Knappe, T.A, Dobbek, H, Schmid, F.X.
登録日2016-02-18
公開日2017-03-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Structural and Functional Analysis of Chaperone Domain Insertion in Fkbp12
To Be Published
4BZA
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BU of 4bza by Molmil
Crystal structure of TamA POTRA domains 1-3 from E. coli
分子名称: 1,2-ETHANEDIOL, TRANSLOCATION AND ASSEMBLY MODULE TAMA
著者Jakob, R.P, Gruss, F, Zaehringer, F, Burmann, B.M, Hiller, S, Maier, T.
登録日2013-07-24
公開日2013-09-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.839 Å)
主引用文献The Structural Basis of Autotransporter Translocation by Tama
Nat.Struct.Mol.Biol., 20, 2013
7AQS
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BU of 7aqs by Molmil
Crystal structure of E. coli DPS in space group P1
分子名称: DNA protection during starvation protein, FE (III) ION
著者Jakob, R.P, Pipercevic, J, Righetto, R, Goldie, K, Stahlberg, H, Maier, T, Hiller, S.
登録日2020-10-22
公開日2021-09-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification of a Dps contamination in Mitomycin-C-induced expression of Colicin Ia.
Biochim Biophys Acta Biomembr, 1863, 2021
7AYN
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BU of 7ayn by Molmil
Crystal structure of the lectin domain of the FimH variant Arg98Ala, in complex with Methyl 3-chloro-4-D-mannopyranosyloxy-3-biphenylcarboxylate
分子名称: 1,2-ETHANEDIOL, Type 1 fimbrin D-mannose specific adhesin, methyl 3-[3-chloranyl-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-phenyl]benzoate
著者Jakob, R.P, Tomasic, T, Rabbani, S, Reisner, A, Jakopin, Z, Maier, T, Ernst, B, Anderluh, M.
登録日2020-11-12
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Does targeting Arg98 of FimH lead to high affinity antagonists?
Eur.J.Med.Chem., 211, 2020
7R1V
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BU of 7r1v by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with dynobactin A
分子名称: Dynobactin A, Outer membrane protein assembly factor BamA
著者Jakob, R.P, Hiller, S, Maier, T.
登録日2022-02-03
公開日2022-09-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Computational identification of a systemic antibiotic for gram-negative bacteria.
Nat Microbiol, 7, 2022
7R1W
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BU of 7r1w by Molmil
E. coli BAM complex (BamABCDE) bound to dynobactin A
分子名称: Dynobactin A, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Jakob, R.P, Hiller, S, Maier, T.
登録日2022-02-03
公開日2022-09-28
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Computational identification of a systemic antibiotic for gram-negative bacteria.
Nat Microbiol, 7, 2022
5CGB
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BU of 5cgb by Molmil
Crystal structure of FimH in complex with heptyl alpha-D-septanoside
分子名称: (6R)-1,6-anhydro-2-O-heptyl-6-(hydroxymethyl)-D-galactitol, Protein FimH, SULFATE ION
著者Jakob, R.P, Preston, R.P, Zihlmann, P, Fiege, B, Sager, C.P, Vannam, R, Rabbani, S, Zalewski, A, Maier, T, Ernst, B, Peczuh, M.
登録日2015-07-09
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The price of flexibility - a case study on septanoses as pyranose mimetics.
Chem Sci, 9, 2018
7NL6
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BU of 7nl6 by Molmil
Crystal Structure of DC-SIGN in complex with a triazole-based glycomimetic ligand
分子名称: CALCIUM ION, DC-SIGN, CRD domain, ...
著者Jakob, R.P, Cramer, J, Lakkaichi, A, Aliu, B, Cattaneo, I, Klein, S, Jiang, X, Rabbani, S, Schwardt, O, Ernst, B, Maier, T.
登録日2021-02-22
公開日2021-10-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Sweet Drugs for Bad Bugs: A Glycomimetic Strategy against the DC-SIGN-Mediated Dissemination of SARS-CoV-2.
J.Am.Chem.Soc., 143, 2021
7NL7
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BU of 7nl7 by Molmil
Crystal Structure of DC-SIGN in complex with a triazole-based glycomimetic ligand
分子名称: 3-Aminopropyl 2-deoxy-2-(4-phenyl-1,2,3-triazol-1-yl)-alpha-D-mannopyranoside, CALCIUM ION, DC-SIGN, ...
著者Jakob, R.P, Cramer, J, Lakkaichi, A, Aliu, B, Cattaneo, I, Klein, S, Jiang, X, Rabbani, S, Schwardt, O, Ernst, B, Maier, T.
登録日2021-02-22
公開日2021-10-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sweet Drugs for Bad Bugs: A Glycomimetic Strategy against the DC-SIGN-Mediated Dissemination of SARS-CoV-2.
J.Am.Chem.Soc., 143, 2021
7P1C
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BU of 7p1c by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with darobactin B
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein assembly factor BamA, TRP-ASN-UX8-THR-LYS-ARG-PHE
著者Jakob, R.P, Modaresi, S.M, Hiller, S, Maier, T.
登録日2021-07-01
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mutasynthetic Production and Antimicrobial Characterization of Darobactin Analogs.
Microbiol Spectr, 9, 2021
7NRF
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BU of 7nrf by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with darobactin (crystal form 2)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Darobactin, MAGNESIUM ION, ...
著者Jakob, R.P, Kaur, H, Marzinek, J.K, Green, R, Imai, Y, Bolla, J, Robinson, C, Bond, P.J, Lewis, K, Maier, T, Hiller, S.
登録日2021-03-03
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The antibiotic darobactin mimics a beta-strand to inhibit outer membrane insertase.
Nature, 593, 2021
7NRE
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BU of 7nre by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with darobactin (crystal form 1)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Darobactin, MAGNESIUM ION, ...
著者Jakob, R.P, Kaur, H, Marzinek, J.K, Green, R, Imai, Y, Bolla, J, Robinson, C, Bond, P.J, Lewis, K, Maier, T, Hiller, S.
登録日2021-03-03
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The antibiotic darobactin mimics a beta-strand to inhibit outer membrane insertase.
Nature, 593, 2021
7NRI
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BU of 7nri by Molmil
Structure of the darobactin-bound E. coli BAM complex (BamABCDE)
分子名称: 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Jakob, R.P, Kaur, H, Marzinek, J.K, Green, R, Imai, Y, Bolla, J, Robinson, C, Bond, P.J, Lewis, K, Maier, T, Hiller, S.
登録日2021-03-03
公開日2021-04-21
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献The antibiotic darobactin mimics a beta-strand to inhibit outer membrane insertase.
Nature, 593, 2021
8AS4
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BU of 8as4 by Molmil
Crystal structure of human beta-arrestin-1
分子名称: Beta-arrestin-1
著者Jakob, R.P, Panwalkar, V, Grzesiek, S.
登録日2022-08-18
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A key GPCR phosphorylation motif discovered in arrestin2⋅CCR5 phosphopeptide complexes.
Mol.Cell, 83, 2023
6HP1
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BU of 6hp1 by Molmil
Crystal Structure of the O-Methyltransferase from the trans-AT PKS multienzyme C0ZGQ3 of Brevibacillus brevis
分子名称: ETHYL MERCURY ION, Putative polyketide synthase
著者Jakob, R.P, Felber, P, Demyanenko, Y, Delbart, F, Maier, T.
登録日2018-09-19
公開日2019-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Functional Analysis of an O-Methyltransferase from the trans-AT PKS biosynthesis pathway
To Be Published
5EX2
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BU of 5ex2 by Molmil
Crystal structure of cyclophilin AquaCyp293 from Hirschia baltica
分子名称: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Jakob, R.P, Maier, T.
登録日2015-11-23
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.294 Å)
主引用文献Structural and Functional Characterization of a Novel Family of Cyclophilins, the AquaCyps.
Plos One, 11, 2016
5EX1
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BU of 5ex1 by Molmil
Crystal structure of cyclophilin AquaCyp300 from Hirschia baltica
分子名称: MAGNESIUM ION, Peptidyl-prolyl cis-trans isomerase cyclophilin type
著者Jakob, R.P, Maier, T.
登録日2015-11-23
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.053 Å)
主引用文献Structural and Functional Characterization of a Novel Family of Cyclophilins, the AquaCyps.
Plos One, 11, 2016
5HU7
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BU of 5hu7 by Molmil
Crystal structure of the trans-AT PKS dehydratase domain of C0ZGQ4 from Brevibacillus brevis
分子名称: Putative polyketide synthase
著者Jakob, R.P, Hauswirth, P, Dilmi, J, Herbst, D.A, Maier, T.
登録日2016-01-27
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Dehydratase Domains from trans-AT Polyketide Biosynthetic Pathway
To Be Published
3KNQ
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BU of 3knq by Molmil
Beta Turn Optimization of the Gene-3-Protein of Filamentous Phage Fd
分子名称: Attachment protein G3P
著者Jakob, R.P, Dobbek, H.
登録日2009-11-12
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Elimination of a cis-proline-containing loop and turn optimization stabilizes a protein and accelerates its folding.
J.Mol.Biol., 399, 2010
5HQW
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BU of 5hqw by Molmil
Crystal structure of a trans-AT PKS dehydratase domain of C0ZGQ6 from Brevibacillus brevis
分子名称: MAGNESIUM ION, Putative polyketide synthase
著者Jakob, R.P, Hauswirth, P, Dilmi, J, Herbst, D.A, Maier, T.
登録日2016-01-22
公開日2017-01-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal Structures of Dehydratase Domains from trans AT Polyketide Biosynthetic Pathway.
To Be Published
5L4U
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BU of 5l4u by Molmil
Crystal structure of FimH lectin domain in complex with 2-Fluoro-Heptylmannoside
分子名称: Protein FimH, heptyl 2-fluoro-alpha-D-mannopyranoside
著者Jakob, R.P, Zihlmann, P, Rabbani, S, Maier, T, Ernst, B.
登録日2016-05-26
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献High-Affinity Carbohydrate-Lectin Interactions: How Nature Makes it Possible
To Be Published

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件を2024-07-17に公開中

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