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PDB: 3272 results

1I53
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RE(I)-TRICARBONYL DIIMINE (Q107H)) AZURIN
Descriptor: 4,7-DIMETHYL-[1,10]PHENANTHROLINE, AZURIN, COPPER (II) ION, ...
Authors:Di Bilio, A.J, Crane, B.R, Wehbi, W.A, Kiser, C.N, Abu-Omar, M.M, Carlos, R.M, Richards, J.H, Winkler, J.R, Gray, H.B.
Deposit date:2001-02-24
Release date:2001-10-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Properties of photogenerated tryptophan and tyrosyl radicals in structurally characterized proteins containing rhenium(I) tricarbonyl diimines.
J.Am.Chem.Soc., 123, 2001
4K8I
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Crystal Structure of Staphylococcal Nuclease mutant I92V/V99L
Descriptor: Thermonuclease
Authors:Sanders, J.M, Latimer, E.C, Roeser, J.R, Janowska, K, Sakon, J, Stites, W.E.
Deposit date:2013-04-18
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Hydrophobic core mutants of Staphylococcal nuclease
To be Published
4K9J
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Structure of Re(CO)3(4,7-dimethyl-phen)(Thr126His)(Lys122Trp)(His83Glu)(Trp48Phe)(Tyr72Phe)(Tyr108Phe)AzCu(II), a Rhenium modified Azurin mutant
Descriptor: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
Authors:Takematsu, K, Williamson, H.R, Blanco-Rodriguez, A.M, Sokolova, L, Nikolovski, P, Kaiser, J.T, Towrie, M, Clark, I.P, Vlcek Jr, A, Winkler, J.R, Gray, H.B.
Deposit date:2013-04-20
Release date:2013-10-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tryptophan-accelerated electron flow across a protein-protein interface.
J.Am.Chem.Soc., 135, 2013
4K7B
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Crystal structure of Extrinsic protein in photosystem II
Descriptor: Extrinsic protein in photosystem II, GLYCEROL, SULFATE ION
Authors:Nagao, R, Suga, M, Niikura, A, Okumura, A, Koua, F.H.M, Suzuki, T, Tomo, T, Enami, I, Shen, J.R.
Deposit date:2013-04-16
Release date:2013-09-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Psb31, a Novel Extrinsic Protein of Photosystem II from a Marine Centric Diatom and Implications for Its Binding and Function
Biochemistry, 52, 2013
2C6C
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membrane-bound glutamate carboxypeptidase II (GCPII) in complex with GPI-18431 (S)-2-(4-iodobenzylphosphonomethyl)-pentanedioic acid
Descriptor: (2S)-2-{[HYDROXY(4-IODOBENZYL)PHOSPHORYL]METHYL}PENTANEDIOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mesters, J.R, Barinka, C, Li, W, Tsukamoto, T, Majer, P, Slusher, B.S, Konvalinka, J, Hilgenfeld, R.
Deposit date:2005-11-09
Release date:2006-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Glutamate Carboxypeptidase II, a Drug Target in Neuronal Damage and Prostate Cancer.
Embo J., 25, 2006
4K8J
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Crystal Structure of Staphylococcal nuclease mutant V23L/V66I
Descriptor: Thermonuclease
Authors:Sanders, J.M, Gill, E, Roeser, J.R, Janowska, K, Sakon, J, Stites, W.E.
Deposit date:2013-04-18
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Hydrophobic core mutants of Staphylococcal nuclease
To be Published
2C6G
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Membrane-bound glutamate carboxypeptidase II (GCPII) with bound glutamate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Mesters, J.R, Barinka, C, Li, W, Tsukamoto, T, Majer, P, Slusher, B.S, Konvalinka, J, Hilgenfeld, R.
Deposit date:2005-11-09
Release date:2006-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of glutamate carboxypeptidase II, a drug target in neuronal damage and prostate cancer.
EMBO J., 25, 2006
2BQZ
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Crystal structure of a ternary complex of the human histone methyltransferase Pr-SET7 (also known as SET8)
Descriptor: HISTONE H4, S-ADENOSYL-L-HOMOCYSTEINE, SET8 PROTEIN
Authors:Xiao, B, Jing, C, Kelly, G, Walker, P.A, Muskett, F.W, Frenkiel, T.A, Martin, S.R, Sarma, K, Reinberg, D, Gamblin, S.J, Wilson, J.R.
Deposit date:2005-04-28
Release date:2005-06-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Specificity and Mechanism of the Histone Methyltransferase Pr-Set7
Genes Dev., 19, 2005
1IMS
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BU of 1ims by Molmil
MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)
Descriptor: 4'-DEOXY-4'-IODODOXORUBICIN, DNA (5'-D(*CP*GP*AP*TP*CP*G)-3')
Authors:Berger, I, Su, L, Spitzner, J.R, Kang, C, Burke, T.G, Rich, A.
Deposit date:1995-10-23
Release date:1996-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular structure of the halogenated anti-cancer drug iododoxorubicin complexed with d(TGTACA) and d(CGATCG).
Nucleic Acids Res., 23, 1995
4L6I
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Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with adenine
Descriptor: ADENINE, S-methyl-5'-thioadenosine phosphorylase, SULFATE ION
Authors:Torini, J.R, DeMarco, R, Brandao-Neto, J, Pereira, H.M.
Deposit date:2013-06-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway.
Plos Negl Trop Dis, 10, 2016
2BPM
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BU of 2bpm by Molmil
STRUCTURE OF CDK2-CYCLIN A WITH PHA-630529
Descriptor: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE, CELL DIVISION PROTEIN KINASE 2, CYCLIN A2, ...
Authors:Cameron, A, Fogliatto, G, Pevarello, P, Brasca, M.G, Orsini, P, Traquandi, G, Longo, A, Nesi, M, Orzi, F, Piutti, C, Sansonna, P, Varasi, M, Vulpetti, A, Roletto, F, Alzani, R, Ciomei, M, Albanese, C, Pastori, W, Marsiglio, A, Pesenti, E, Fiorentini, F, Bischoff, J.R, Mercurio, C.
Deposit date:2005-04-21
Release date:2005-12-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:3-Aminopyrazole Inhibitors of Cdk2-Cyclin a as Antitumor Agents. 2. Lead Optimization
J.Med.Chem., 48, 2005
1IT3
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BU of 1it3 by Molmil
Hagfish CO ligand hemoglobin
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin
Authors:Mito, M, Chong, K.T, Park, S.-Y, Tame, J.R.
Deposit date:2002-01-05
Release date:2002-01-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of deoxy- and carbonmonoxyhemoglobin F1 from the hagfish Eptatretus burgeri
J.Biol.Chem., 277, 2002
1IMR
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BU of 1imr by Molmil
MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)
Descriptor: 4'-DEOXY-4'-IODODOXORUBICIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Berger, I, Su, L, Spitzner, J.R, Kang, C, Burke, T.G, Rich, A.
Deposit date:1995-10-23
Release date:1996-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular structure of the halogenated anti-cancer drug iododoxorubicin complexed with d(TGTACA) and d(CGATCG).
Nucleic Acids Res., 23, 1995
1IE3
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BU of 1ie3 by Molmil
CRYSTAL STRUCTURE OF R153C E. COLI MALATE DEHYDROGENASE
Descriptor: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRUVIC ACID
Authors:Bell, J.K, Yennawar, H.P, Wright, S.K, Thompson, J.R, Viola, R.E, Banaszak, L.J.
Deposit date:2001-04-05
Release date:2001-09-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Analyses of a Malate Dehydrogenase with a Variable Active Site
J.Biol.Chem., 276, 2001
2DN1
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1.25A resolution crystal structure of human hemoglobin in the oxy form
Descriptor: Hemoglobin alpha subunit, Hemoglobin beta subunit, OXYGEN MOLECULE, ...
Authors:Park, S.-Y, Yokoyama, T, Shibayama, N, Shiro, Y, Tame, J.R.
Deposit date:2006-04-25
Release date:2006-05-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:1.25 a resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.
J.Mol.Biol., 360, 2006
4LT2
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BU of 4lt2 by Molmil
HEWL co-crystallized with Carboplatin in non-NaCl conditions: crystal 2 processed using the EVAL software package
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Tanley, S.W.M, Diederichs, K, Kroon-Batenburg, L.M.J, Schreurs, A.M.M, Helliwell, J.R.
Deposit date:2013-07-23
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Carboplatin binding to a model protein in non-NaCl conditions to eliminate partial conversion to cisplatin, and the use of different criteria to choose the resolution limit
To be Published
1IZI
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BU of 1izi by Molmil
Inhibitor of HIV protease with unusual binding mode potently inhibiting multi-resistant protease mutants
Descriptor: CHLORIDE ION, proteinase, {(1S)-1-BENZYL-4-[3-CARBAMOYL-1-(1-CARBAMOYL-2-PHENYL-ETHYLCARBAMOYL)-(S)-PROPYLCARBAMOYL]-2-OXO-5-PHENYL-PENTYL}-CARBAMIC ACID TERT-BUTYL ESTER
Authors:Weber, J, Mesters, J.R, Lepsik, M, Prejdova, J, Svec, M, Sponarova, J, Mlcochova, P, Skalicka, K, Strisovsky, K, Uhlikova, T, Soucek, M, Machala, L, Stankova, M, Vondrasek, J, Klimkait, T, Kraeusslich, H.-G, Hilgenfeld, R, Konvalinka, J.
Deposit date:2002-10-02
Release date:2002-12-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Unusual Binding Mode of an HIV-1 Protease Inhibitor Explains its Potency against Multi-drug-resistant Virus Strains
J.MOL.BIOL., 324, 2002
4MGS
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BiXyn10A CBM1 APO
Descriptor: Putative glycosyl hydrolase family 10
Authors:Chekan, J.R, Nair, S.K.
Deposit date:2013-08-28
Release date:2014-08-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LT3
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HEWL co-crystallized with Carboplatin in non-NaCl conditions: crystal 2 processed using the XDS software package
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Tanley, S.W.M, Diederichs, K, Kroon-Batenburg, L.M.J, Schreurs, A.M.M, Helliwell, J.R.
Deposit date:2013-07-23
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Carboplatin binding to histidine.
Acta Crystallogr.,Sect.F, 70, 2014
7KD1
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BU of 7kd1 by Molmil
Apo structure of the THF riboswitch aptamer domain
Descriptor: MAGNESIUM ION, SULFATE ION, tetrahydrofolate riboswitch aptamer domain
Authors:Wilt, H.M, Stagno, J.R, Wang, Y.-X.
Deposit date:2020-10-07
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tying the knot in the tetrahydrofolate (THF) riboswitch: A molecular basis for gene regulation.
J.Struct.Biol., 213, 2021
1PAA
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BU of 1paa by Molmil
STRUCTURE OF A HISTIDINE-X4-HISTIDINE ZINC FINGER DOMAIN: INSIGHTS INTO ADR1-UAS1 PROTEIN-DNA RECOGNITION
Descriptor: YEAST TRANSCRIPTION FACTOR ADR1, ZINC ION
Authors:Bernstein, B.E, Hoffman, R.C, Horvath, S.J, Herriott, J.R, Klevit, R.E.
Deposit date:1994-07-15
Release date:1994-10-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a histidine-X4-histidine zinc finger domain: insights into ADR1-UAS1 protein-DNA recognition.
Biochemistry, 33, 1994
2BHG
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BU of 2bhg by Molmil
3C protease from type A10(61) foot-and-mouth disease virus
Descriptor: FOOT-AND-MOUTH DISEASE VIRUS 3C PROTEASE
Authors:Birtley, J.R, Brick, P, Curry, S.
Deposit date:2005-01-10
Release date:2005-02-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Foot-and-Mouth Disease Virus 3C Protease: New Insights Into Catalytic Mechanism and Cleavage Specificity
J.Biol.Chem., 280, 2005
4M1X
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BU of 4m1x by Molmil
Tetrameric ring structure of 201phi2-1p060 from Pseudomonas phage 201phi2-1
Descriptor: DI(HYDROXYETHYL)ETHER, uncharacterized protein 201phi2-1p060
Authors:Partridge, J.R, Zehr, E.A, Agard, D.A.
Deposit date:2013-08-04
Release date:2014-08-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Tetrameric ring structure of 201phi2-1p060 from Pseudomonas phage 201phi2-1
To be Published
1JA8
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Kinetic Analysis of Product Inhibition in Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, Manganese Superoxide Dismutase, SULFATE ION
Authors:Hearn, A.S, Stroupe, M.E, Cabelli, D.E, Lepock, J.R, Tainer, J.A, Nick, H.S, Silverman, D.S.
Deposit date:2001-05-29
Release date:2001-06-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Kinetic analysis of product inhibition in human manganese superoxide dismutase.
Biochemistry, 40, 2001
2C6P
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Membrane-bound glutamate carboxypeptidase II (GCPII) in complex with phosphate anion
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Mesters, J.R, Barinka, C, Li, W, Tsukamoto, T, Majer, P, Slusher, B.S, Konvalinka, J, Hilgenfeld, R.
Deposit date:2005-11-11
Release date:2006-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of Glutamate Carboxypeptidase II, a Drug Target in Neuronal Damage and Prostate Cancer.
Embo J., 25, 2006

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