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PDB: 3272 件
3A3E
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Crystal structure of penicillin binding protein 4 (dacB) from Haemophilus influenzae, complexed with novel beta-lactam (CMV)
分子名称: (2R,4S)-2-[(1R)-1-({(2R)-2-[(4-ethyl-2,3-dioxopiperazin-1-yl)amino]-2-phenylacetyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Penicillin-binding protein 4
著者Kawai, F, Roper, D.I, Park, S.-Y, Tame, J.R.H.
登録日2009-06-12
公開日2009-12-22
最終更新日2013-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae
J.Mol.Biol., 396, 2010
3AK5
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Hemoglobin protease (Hbp) passenger missing domain-2
分子名称: CALCIUM ION, Hemoglobin-binding protease hbp
著者Nishimura, K, Park, S.-Y, Tame, J.R.H.
登録日2010-07-07
公開日2010-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Role of domains within the autotransporter Hbp/Tsh
Acta Crystallogr.,Sect.D, 66, 2010
3AQD
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BU of 3aqd by Molmil
Unliganded TRAP
分子名称: Transcription attenuation protein mtrB
著者Malay, A.A.D, Watanabe, M, Heddle, J.G, Tame, J.R.H.
登録日2010-10-29
公開日2010-12-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Allostery in TRAP
To be Published
3AEH
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BU of 3aeh by Molmil
Integral membrane domain of autotransporter Hbp
分子名称: Hemoglobin-binding protease hbp autotransporter
著者Tajima, N, Park, S.-Y, Tame, J.R.H.
登録日2010-02-04
公開日2010-07-07
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel intein-like autoproteolytic mechanism in autotransporter proteins.
J.Mol.Biol., 402, 2010
8OJ4
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BU of 8oj4 by Molmil
Structure of the MlaCD complex (1:6 stoichiometry)
分子名称: ABC transporter substrate-binding protein, ABC-type organic solvent transporter
著者Wotherspoon, P, Bui, S, Sridhar, P, Bergeron, J.R.C, Knowles, T.J.
登録日2023-03-23
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (4.35 Å)
主引用文献The structure of the MlaC-MlaD complex reveals novel insights into periplasmic phospholipid transport processes
To Be Published
8OJG
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Structure of the MlaCD complex (2:6 stoichiometry)
分子名称: ABC transporter substrate-binding protein, ABC-type organic solvent transporter
著者Wotherspoon, P, Bui, S, Sridhar, P, Bergeron, J.R.C, Knowles, T.J.
登録日2023-03-24
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (4.38 Å)
主引用文献The structure of the MlaC-MlaD complex reveals novel insights into periplasmic phospholipid transport processes
To Be Published
1WXR
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BU of 1wxr by Molmil
Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
分子名称: haemoglobin protease
著者Otto, B.R, Sijbrandi, R, Luirink, J, Oudega, B, Heddle, J.G, Mizutani, K, Park, S.-Y, Tame, J.R.H.
登録日2005-01-31
公開日2005-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of heme binding protein, an autotransporter hemoglobin protease from pathogenic escherichia coli
J.Biol.Chem., 280, 2005
1A0N
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BU of 1a0n by Molmil
NMR STUDY OF THE SH3 DOMAIN FROM FYN PROTO-ONCOGENE TYROSINE KINASE COMPLEXED WITH THE SYNTHETIC PEPTIDE P2L CORRESPONDING TO RESIDUES 91-104 OF THE P85 SUBUNIT OF PI3-KINASE, FAMILY OF 25 STRUCTURES
分子名称: FYN, PRO-PRO-ARG-PRO-LEU-PRO-VAL-ALA-PRO-GLY-SER-SER-LYS-THR
著者Renzoni, D.A, Pugh, D.J.R, Siligardi, G, Das, P, Morton, C.J, Rossi, C, Waterfield, M.D, Campbell, I.D, Ladbury, J.E.
登録日1997-12-05
公開日1998-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural and thermodynamic characterization of the interaction of the SH3 domain from Fyn with the proline-rich binding site on the p85 subunit of PI3-kinase.
Biochemistry, 35, 1996
1B5J
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BU of 1b5j by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KQK
分子名称: PROTEIN (LYS-GLN-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANIUM ATOM
著者Tame, J.R.H, Wilkinson, A.J.
登録日1999-01-06
公開日1999-01-13
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and calorimetric analysis of peptide binding to OppA protein.
J.Mol.Biol., 291, 1999
1B6H
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BU of 1b6h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORVALYL-LYSINE
分子名称: LYS-NVA-LYS PEPTIDE, Periplasmic oligopeptide-binding protein, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-13
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B7H
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BU of 1b7h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORLEUCYL-LYSINE
分子名称: LYS-NLE-LYS PEPTIDE, Periplasmic oligopeptide-binding protein, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-16
公開日1998-11-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B51
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BU of 1b51 by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KSK
分子名称: PROTEIN (LYS-SER-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANYL (VI) ION
著者Tame, J.R.H, Wilkinson, A.J.
登録日1999-01-11
公開日1999-01-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and calorimetric analysis of peptide binding to OppA protein.
J.Mol.Biol., 291, 1999
1B9J
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OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KLK
分子名称: PROTEIN (LYS-LEU-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANYL (VI) ION
著者Tame, J.R.H, Wilkinson, A.J.
登録日1999-02-11
公開日1999-02-22
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and calorimetric analysis of peptide binding to OppA protein.
J.Mol.Biol., 291, 1999
2RKM
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BU of 2rkm by Molmil
STRUCTURE OF OPPA COMPLEXED WITH LYS-LYS
分子名称: LYSINE, OLIGO-PEPTIDE BINDING PROTEIN, URANYL (VI) ION
著者Sleigh, S.H, Tame, J.R.H, Wilkinson, A.J.
登録日1997-03-25
公開日1997-07-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Peptide binding in OppA, the crystal structures of the periplasmic oligopeptide binding protein in the unliganded form and in complex with lysyllysine.
Biochemistry, 36, 1997
1AZG
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BU of 1azg by Molmil
NMR STUDY OF THE SH3 DOMAIN FROM FYN PROTO-ONCOGENE TYROSINE KINASE KINASE COMPLEXED WITH THE SYNTHETIC PEPTIDE P2L CORRESPONDING TO RESIDUES 91-104 OF THE P85 SUBUNIT OF PI3-KINASE, MINIMIZED AVERAGE (PROBMAP) STRUCTURE
分子名称: FYN, PRO-PRO-ARG-PRO-LEU-PRO-VAL-ALA-PRO-GLY-SER-SER-LYS-THR
著者Renzoni, D.A, Pugh, D.J.R, Siligardi, G, Das, P, Morton, C.J, Rossi, C, Waterfield, M.D, Campbell, I.D, Ladbury, J.E.
登録日1997-11-18
公開日1998-02-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural and thermodynamic characterization of the interaction of the SH3 domain from Fyn with the proline-rich binding site on the p85 subunit of PI3-kinase.
Biochemistry, 35, 1996
1WUB
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BU of 1wub by Molmil
Crystal structure of the polyisoprenoid-binding protein, TT1927b, from Thermus thermophilus HB8
分子名称: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, conserved hypothetical protein TT1927b
著者Handa, N, Idaka, M, Terada, T, Hamana, H, Ishizuka, Y, Park, S.-Y, Tame, J.R.H, Doi-Katayama, Y, Hirota, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-03
公開日2004-12-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8
Protein Sci., 14, 2005
2W7R
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Structure of the PDZ domain of Human Microtubule associated serine- threonine kinase 4
分子名称: MICROTUBULE-ASSOCIATED SERINE/THREONINE-PROTEIN KINASE 4, PHOSPHATE ION
著者Muniz, J.R.C, Elkins, J, Wang, J, Savitzky, P, Roos, A, Salah, E, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S.
登録日2008-12-24
公開日2009-05-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unusual Binding Interactions in Pdz Domain Crystal Structures Help Explain Binding Mechanisms.
Protein Sci., 19, 2010
1B3H
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BU of 1b3h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-CYCLOHEXYLALANYL-LYSINE
分子名称: LYS-ALC-LYS PEPTIDE, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-16
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1B5H
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BU of 1b5h by Molmil
OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOPROPANOIC ACID-LYSINE
分子名称: LYS-DPP-LYS PEPTIDE, OLIGO-PEPTIDE BINDING PROTEIN, URANIUM ATOM
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-13
公開日1998-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
1ZEW
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BU of 1zew by Molmil
B-DNA
分子名称: 5'-D(*CP*CP*TP*CP*TP*AP*GP*AP*GP*G)-3', SODIUM ION
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-19
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZF5
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GCT duplex B-DNA
分子名称: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-19
公開日2005-05-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZFG
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CTC Duplex B-DNA
分子名称: 5'-D(*CP*CP*GP*AP*GP*CP*TP*CP*GP*G)-3'
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-20
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZFE
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BU of 1zfe by Molmil
GCA Duplex B-DNA
分子名称: 5'-D(*CP*CP*TP*GP*CP*GP*CP*AP*GP*G)-3'
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-20
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1B2H
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Oligo-Peptide Binding Protein Complexed with Lysyl-Ornithyl-Lysine
分子名称: ACETATE ION, LYS-ORN-LYS, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, ...
著者Davies, T.G, Tame, J.R.H.
登録日1998-11-16
公開日1998-11-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Relating structure to thermodynamics: the crystal structures and binding affinity of eight OppA-peptide complexes.
Protein Sci., 8, 1999
2W4F
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BU of 2w4f by Molmil
CRYSTAL STRUCTURE OF THE FIRST PDZ DOMAIN OF HUMAN SCRIB1
分子名称: 1,2-ETHANEDIOL, PROTEIN LAP4
著者Hozjan, V, Pilka, E.S, Roos, A.K, W Yue, W, Phillips, C, Bray, J, Cooper, C, Salah, E, Elkins, J.M, Muniz, J.R.C, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, von Delft, F, Bountra, C, Doyle, D.A, Oppermann, U.
登録日2008-11-25
公開日2008-12-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of the First Pdz Domain of Human Scrib1
To be Published

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