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PDB: 3296 results

5CHB
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BU of 5chb by Molmil
Crystal structure of nvPizza2-S16H58 coordinating a CdCl2 nanocrystal
Descriptor: CADMIUM ION, CHLORIDE ION, SULFATE ION, ...
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2015-07-10
Release date:2015-07-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein
Angew.Chem.Int.Ed.Engl., 54, 2015
5AIK
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BU of 5aik by Molmil
Human DYRK1A in complex with LDN-211898
Descriptor: 4-(7-METHOXY-1-(TRIFLUOROMETHYL)-9H-PYRIDO[3,4-B]INDOL-9-yl)butan-1-amine, DYRK1A DUAL-SPECIFICITY TYROSINE-PHOSPHORYLATION REGULATED KINASE 1A, PHOSPHATE ION
Authors:Elkins, J.M, Soundararajan, M, Muniz, J.R.C, Cuny, G, Higgins, J, Edwards, A, Bountra, C, Knapp, S.
Deposit date:2015-02-15
Release date:2015-02-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Dyrk1A with Ldn-211898
To be published
2JKV
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BU of 2jkv by Molmil
Structure of human Phosphogluconate Dehydrogenase in complex with NADPH at 2.53A
Descriptor: 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, CHLORIDE ION, ...
Authors:Pilka, E.S, Kavanagh, K.L, von Delft, F, Muniz, J.R.C, Murray, J, Picaud, S, Guo, K, Edwards, A, Arrowsmith, C.H, Weigelt, J, Bountra, C, Oppermann, U.
Deposit date:2008-09-01
Release date:2009-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.532 Å)
Cite:Structure of Human Phosphogluconate Dehydrogenase in Complex with Nadph at 2.53A
To be Published
1NYF
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BU of 1nyf by Molmil
NMR STUDY OF THE SH3 DOMAIN FROM FYN PROTO-ONCOGENE TYROSINE KINASE, MINIMIZED AVERAGE (PROBMAP) STRUCTURE
Descriptor: FYN
Authors:Morton, C.J, Pugh, D.J.R, Campbell, I.D.
Deposit date:1996-04-22
Release date:1996-11-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and peptide binding of the SH3 domain from human Fyn.
Structure, 4, 1996
1QKA
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BU of 1qka by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KRK
Descriptor: LYS-ARG-LYS, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, URANYL (VI) ION
Authors:Tame, J.R.H, Wilkinson, A.J.
Deposit date:1999-07-14
Release date:1999-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and Calorimetric Analysis of Peptide Binding to Oppa Protein
J.Mol.Biol., 291, 1999
5CUL
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BU of 5cul by Molmil
crystal structure of the PscU C-terminal domain
Descriptor: Translocation protein in type III secretion
Authors:Bergeron, J.R.C, Strynadka, N.C.J.
Deposit date:2015-07-24
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of a Type 3 Secretion System (T3SS) Ruler Protein Suggests a Molecular Mechanism for Needle Length Sensing.
J.Biol.Chem., 291, 2016
1QKB
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BU of 1qkb by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KVK
Descriptor: ACETATE ION, PEPTIDE LYS-VAL-LYS, PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN, ...
Authors:Tame, J.R.H, Sleigh, S.H, Wilkinson, A.J.
Deposit date:1999-07-14
Release date:1999-09-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and Calorimetric Analysis of Peptide Binding to Oppa Protein
J.Mol.Biol., 291, 1999
5CUK
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BU of 5cuk by Molmil
Crystal structure of the PscP SS domain
Descriptor: GLYCEROL, Ruler protein
Authors:Bergeron, J.R.C, Strynadka, N.C.J.
Deposit date:2015-07-24
Release date:2015-12-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of a Type 3 Secretion System (T3SS) Ruler Protein Suggests a Molecular Mechanism for Needle Length Sensing.
J.Biol.Chem., 291, 2016
2L27
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BU of 2l27 by Molmil
NMR Structure of the ECD1 of CRF-R1 in complex with a peptide agonist
Descriptor: Corticotropin-releasing factor receptor 1, peptide agonist
Authors:Grace, C.R.R, Perrin, M.H, Gulyas, J.R.R, Rivier, J.E, Vale, W.W, Riek, R.R.
Deposit date:2010-08-12
Release date:2010-09-01
Last modified:2017-03-01
Method:SOLUTION NMR
Cite:NMR structure of the first extracellular domain of corticotropin-releasing factor receptor 1 (ECD1-CRF-R1) complexed with a high affinity agonist.
J.Biol.Chem., 285, 2010
2LPN
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BU of 2lpn by Molmil
Solution Structure of N-Terminal domain of human Conserved Dopamine Neurotrophic Factor (CDNF)
Descriptor: Cerebral dopamine neurotrophic factor
Authors:Latge, C, Cabral, K.M.S, Foguel, D, Pires, J.R.M, Almeida, M.S.
Deposit date:2012-02-15
Release date:2013-02-20
Last modified:2013-05-22
Method:SOLUTION NMR
Cite:(1)H-, (13)C- and (15)N-NMR assignment of the N-terminal domain of human cerebral dopamine neurotrophic factor (CDNF).
Biomol.Nmr Assign., 7, 2013
2LFV
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BU of 2lfv by Molmil
Solution Structure of the SPOR domain from E. coli DamX
Descriptor: Protein damX
Authors:Williams, K.B, Arends, S.J.R, Popham, D.L, Fowler, C.A, Weiss, D.S.
Deposit date:2011-07-15
Release date:2012-07-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Nuclear Magnetic Resonance Solution Structure of the Peptidoglycan-Binding SPOR Domain from Escherichia coli DamX: Insights into Septal Localization.
Biochemistry, 52, 2013
7P7W
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BU of 7p7w by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and ADP
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-20
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P7I
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BU of 7p7i by Molmil
Native structure of N-acetylglucosamine kinase from Plesiomonas shigelloides
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9L
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BU of 7p9l by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-27
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9P
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BU of 7p9p by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and AMP-PNP inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-27
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7PA1
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BU of 7pa1 by Molmil
Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in the absence of N-acetylglucoseamine substrate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-28
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9Y
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BU of 7p9y by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-28
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
6IC4
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BU of 6ic4 by Molmil
Cryo-EM structure of the A. baumannii MLA complex at 8.7 A resolution
Descriptor: ABC transporter ATP-binding protein, ABC transporter permease, Toluene tolerance efflux transporter (ABC superfamily, ...
Authors:Bergeron, J.R, Kollman, J.M.
Deposit date:2018-12-02
Release date:2019-01-23
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.7 Å)
Cite:The Acinetobacter baumannii Mla system and glycerophospholipid transport to the outer membrane.
Elife, 8, 2019
5TCR
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BU of 5tcr by Molmil
Atomic model of the Salmonella SPI-1 type III secretion injectisome basal body proteins InvG, PrgH, and PrgK
Descriptor: Lipoprotein PrgK, Protein InvG, Protein PrgH
Authors:Worrall, L.J, Hong, C, Vuckovic, M, Bergeron, J.R.C, Huang, R.K, Yu, Z, Strynadka, N.C.J.
Deposit date:2016-09-15
Release date:2016-12-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Near-atomic-resolution cryo-EM analysis of the Salmonella T3S injectisome basal body.
Nature, 540, 2016
4XX2
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BU of 4xx2 by Molmil
Ohr from Xylella fastidiosa in oxidized state
Descriptor: Organic hydroperoxide resistance protein
Authors:Alegria, T.G.P, Discola, K.F, Cussiol, J.R.R, Oliveira, M.A, Netto, L.E.S.
Deposit date:2015-01-29
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ohr from Xylella fastidiosa in oxidized state
To Be Published
7O05
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BU of 7o05 by Molmil
Crystal structure of SARS-CoV-2 N-CTD
Descriptor: Nucleoprotein
Authors:Ciges-Tomas, J.R, Vilar, M.
Deposit date:2021-03-25
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Identification of a guanine-specific pocket in the protein N of SARS-CoV-2.
Commun Biol, 5, 2022
7O36
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BU of 7o36 by Molmil
Crystal Structure of SARS-CoV-2 N-CTD in complex with GTP (II)
Descriptor: GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, Nucleoprotein
Authors:Ciges-Tomas, J.R, Vilar, M.
Deposit date:2021-04-01
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of a guanine-specific pocket in the protein N of SARS-CoV-2.
Commun Biol, 5, 2022
7O35
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BU of 7o35 by Molmil
Crystal Structure of SARS-CoV-2 N-CTD in complex with GTP (I)
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Nucleoprotein
Authors:Ciges-Tomas, J.R, Vilar, M.
Deposit date:2021-04-01
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of a guanine-specific pocket in the protein N of SARS-CoV-2.
Commun Biol, 5, 2022
4YNX
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BU of 4ynx by Molmil
Structure of YdiE from E. coli
Descriptor: SULFATE ION, Uncharacterized protein YdiE
Authors:Tame, J.R.H, Nishimura, K, Zhang, K.Y.J.
Deposit date:2015-03-11
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal and solution structure of YdiE from Escherichia coli
Acta Crystallogr.,Sect.F, 71, 2015
5UGY
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BU of 5ugy by Molmil
Influenza hemagglutinin in complex with a neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CH65 heavy chain, ...
Authors:Whittle, J.R.R, Jenni, S, Harrison, S.C.
Deposit date:2017-01-10
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011

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