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PDB: 5587 件

5O1Z
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Structure of Nrd1 RNA binding domain in complex with RNA (CGUAAA)
分子名称: Protein NRD1, RNA (5'-R(*CP*GP*UP*AP*AP*A)-3')
著者Franco-Echevarria, E, Perez-Canadillas, J.M, Gonzalez, B.
登録日2017-05-19
公開日2017-08-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
5NTC
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Crystal structure of mouse CARM1 in complex with inhibitor SA0678
分子名称: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-METHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
著者Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
登録日2017-04-27
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of mouse CARM1 in complex with inhibitor SA0678
To Be Published
5ODE
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Structure of a novel oxidoreductase from Gloeobacter violaceus
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Gll2934 protein, SULFATE ION
著者Buey, R.M, Galindo-Trigo, S, de Pereda, J.M, Balsera, M.
登録日2017-07-05
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献Unprecedented pathway of reducing equivalents in a diflavin-linked disulfide oxidoreductase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2NWI
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BU of 2nwi by Molmil
Crystal structure of protein AF1396 from Archaeoglobus fulgidus, Pfam DUF98
分子名称: Hypothetical protein
著者Bonanno, J.B, Dickey, M, Bain, K.T, Adams, J, Sridhar, V, Wasserman, S, Smith, D, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2006-11-14
公開日2006-11-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of hypothetical protein O28875 from Archaeoglobus fulgidus
To be Published
2NZE
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Structure of beta-lactamase II from Bacillus cereus. R121H, C221S double mutant. Space group P3121.
分子名称: ACETIC ACID, Beta-lactamase II, GLYCEROL, ...
著者Medrano Martin, F.J, Vila, A.J, Gonzalez, J.M.
登録日2006-11-23
公開日2007-05-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Zn2 position in metallo-beta-lactamases is critical for activity: a study on chimeric metal sites on a conserved protein scaffold.
J.Mol.Biol., 373, 2007
2ODU
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BU of 2odu by Molmil
Crystal structure of a fragment of the plakin domain of plectin
分子名称: Plectin 1
著者de Pereda, J.M.
登録日2006-12-27
公開日2007-03-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structure of a tandem pair of spectrin repeats of plectin reveals a modular organization of the plakin domain.
J.Mol.Biol., 368, 2007
2OGF
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BU of 2ogf by Molmil
Crystal structure of protein MJ0408 from Methanococcus jannaschii, Pfam DUF372
分子名称: 8-OXOGUANINE, GLYCEROL, Hypothetical protein MJ0408, ...
著者Ramagopal, U.A, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-01-05
公開日2007-01-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of hypothetical protein MJ0408 from Methanococcus jannaschii
To be Published
2OKT
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BU of 2okt by Molmil
Crystal structure of O-succinylbenzoic acid synthetase from Staphylococcus aureus, ligand-free form
分子名称: O-succinylbenzoic acid synthetase
著者Patskovsky, Y, Toro, R, Malashkevich, V, Sauder, J.M, Ozyurt, S, Smith, D, Dickey, M, Maletic, M, Powell, A, Gheyi, T, Wasserman, S.R, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-01-17
公開日2007-01-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Loss of quaternary structure is associated with rapid sequence divergence in the OSBS family.
Proc.Natl.Acad.Sci.USA, 111, 2014
2PMB
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Crystal structure of predicted nucleotide-binding protein from Vibrio cholerae
分子名称: GLYCEROL, PHOSPHATE ION, Uncharacterized protein
著者Patskovsky, Y, Zhan, C, Shi, W, Toro, R, Sauder, J.M, Gilmore, J, Iizuka, M, Maletic, M, Gheyi, T, Wasserman, S.R, Smith, D, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-04-20
公開日2007-05-08
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal Structure of Predicted Nucleotide-Binding Protein from Vibrio Cholerae.
To be Published
2PZS
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BU of 2pzs by Molmil
Phi29 DNA polymerase complexed with primer-template DNA (post-translocation binary complex)
分子名称: 5'-d(CTAACACGTAAGCAGTC)-3', 5'-d(GACTGCTTAC)-3', DNA polymerase
著者Berman, A.J, Kamtekar, S, Goodman, J.L, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
登録日2007-05-18
公開日2007-07-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases
Embo J., 26, 2007
2Q6E
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BU of 2q6e by Molmil
Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn
分子名称: BH0493 protein, CHLORIDE ION, SODIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Rauschel, F.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-06-05
公開日2007-06-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn.
To be Published
2PX4
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BU of 2px4 by Molmil
Crystal structure of the Murray Valley Encephalitis Virus NS5 2'-O Methyltransferase domain in complex with SAH (Monoclinic form 2)
分子名称: CHLORIDE ION, GLYCEROL, Genome polyprotein [Contains: Capsid protein C (Core protein); Envelope protein M (Matrix protein); Major envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Flavivirin protease NS3 catalytic subunit; Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5)], ...
著者Assenberg, R, Ren, J, Verma, A, Walter, T.S, Alderton, D, Hurrelbrink, R.J, Fuller, S.D, Owens, R.J, Stuart, D.I, Grimes, J.M, Oxford Protein Production Facility (OPPF)
登録日2007-05-14
公開日2007-05-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the Murray Valley encephalitis virus NS5 methyltransferase domain in complex with cap analogues.
J.Gen.Virol., 88, 2007
2PFN
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BU of 2pfn by Molmil
Na in the active site of DNA Polymerase lambda
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ...
著者Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
登録日2007-04-05
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Role of the catalytic metal during polymerization by DNA polymerase lambda.
DNA Repair, 6, 2007
2OO6
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BU of 2oo6 by Molmil
Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400
分子名称: Putative L-alanine-DL-glutamate epimerase, SULFATE ION
著者Bonanno, J.B, Dickey, M, Bain, K.T, Wu, B, Sridhar, V, Freeman, J, Smyth, L, Atwell, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-01-25
公開日2007-02-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of putative L-alanine-DL-glutamate epimerase from Burkholderia xenovorans strain LB400
To be Published
2OOG
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BU of 2oog by Molmil
Crystal structure of glycerophosphoryl diester phosphodiesterase from Staphylococcus aureus
分子名称: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, SULFATE ION, ...
著者Patskovsky, Y, Fedorov, E, Toro, R, Sauder, J.M, Smith, D, Freeman, J, Maletic, M, Powell, A, Gheyi, T, Wasserman, S.R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-01-25
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Staphylococcus Aureus
To be Published
5O1T
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BU of 5o1t by Molmil
Solution structure of the RNA binding domain of Nrd1
分子名称: Protein NRD1
著者Martinez-Lumbreras, S, Perez-Canadillas, J.M.
登録日2017-05-19
公開日2017-08-02
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
Nucleic Acids Res., 45, 2017
5OQ3
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BU of 5oq3 by Molmil
High resolution structure of the functional region of Cwp19 from Clostridium difficile
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Cwp19, ...
著者Bradshaw, W.J, Kirby, J.M, Roberts, A.K, Shone, C.C, Acharya, K.R.
登録日2017-08-10
公開日2017-11-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The molecular structure of the glycoside hydrolase domain of Cwp19 from Clostridium difficile.
FEBS J., 284, 2017
5OQ2
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Se-SAD structure of the functional region of Cwp19 from Clostridium difficile
分子名称: 1,2-ETHANEDIOL, Cwp19, PHOSPHATE ION
著者Bradshaw, W.J, Kirby, J.M, Roberts, A.K, Shone, C.C, Acharya, K.R.
登録日2017-08-10
公開日2017-11-01
最終更新日2017-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The molecular structure of the glycoside hydrolase domain of Cwp19 from Clostridium difficile.
FEBS J., 284, 2017
2OQI
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Human Dipeptidyl Peptidase IV (DPP4) with Piperidinone-constrained phenethylamine
分子名称: (4R,5R)-5-AMINO-1-[2-(1,3-BENZODIOXOL-5-YL)ETHYL]-4-(2,4,5-TRIFLUOROPHENYL)PIPERIDIN-2-ONE, Dipeptidyl peptidase 4 (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (TP103) (Adenosine deaminase complexing protein 2) (ADABP)
著者Pei, Z, Li, X, von Geldern, T.W, Longenecker, K.L, Pireh, D, Stewart, K.D, Backes, B.J, Lai, C, Lubben, T.H, Ballaron, S.J, Beno, D.W, Kempf-Grote, A.J, Sham, H.L, Trevillyan, J.M.
登録日2007-01-31
公開日2007-04-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery and Structure-Activity Relationships of Piperidinone- and Piperidine-Constrained Phenethylamines as Novel, Potent, and Selective Dipeptidyl Peptidase IV Inhibitors.
J.Med.Chem., 50, 2007
5OUW
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Metal free structure of SynFtn
分子名称: Ferritin
著者Hemmings, A.M, Bradley, J.M.
登録日2017-08-25
公開日2019-01-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Reaction of O2with a diiron protein generates a mixed-valent Fe2+/Fe3+center and peroxide.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
2PFP
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BU of 2pfp by Molmil
DNA Polymerase lambda in complex with DNA and dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ...
著者Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A.
登録日2007-04-05
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of the catalytic metal during polymerization by DNA polymerase lambda.
DNA Repair, 6, 2007
2PJD
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BU of 2pjd by Molmil
Crystal structure of 16S rRNA methyltransferase RsmC
分子名称: Ribosomal RNA small subunit methyltransferase C
著者Sunita, S, Purta, E, Durawa, M, Tkaczuk, K.L, Bujnicki, J.M, Sivaraman, J.
登録日2007-04-16
公開日2007-07-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC
Nucleic Acids Res., 35, 2007
2PTF
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Crystal structure of protein MTH_863 from Methanobacterium thermoautotrophicum bound to FMN
分子名称: FLAVIN MONONUCLEOTIDE, Uncharacterized protein MTH_863
著者Bonanno, J.B, Rutter, M, Bain, K.T, Iizuka, M, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-08
公開日2007-05-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of protein MTH_863 from Methanobacterium thermoautotrophicum bound to FMN.
To be Published
2PMR
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Crystal structure of a protein of unknown function from Methanobacterium thermoautotrophicum
分子名称: Uncharacterized protein
著者Bonanno, J.B, Freeman, J, Bain, K.T, Wu, B, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-04-23
公開日2007-05-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Crystal structure of a protein of unknown function from Methanobacterium thermoautotrophicum.
To be Published
2PQL
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Crystal Structure of Anopheles gambiae D7R4-tryptamine complex
分子名称: 2-(1H-INDOL-3-YL)ETHANAMINE, D7r4 protein
著者Andersen, J.F, Mans, B.J, Calvo, E, Ribeiro, J.M.
登録日2007-05-02
公開日2007-10-09
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Crystal Structure of D7r4, a Salivary Biogenic Amine-binding Protein from the Malaria Mosquito Anopheles gambiae.
J.Biol.Chem., 282, 2007

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件を2024-07-17に公開中

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