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PDB: 5587 件

4D9S
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Crystal structure of Arabidopsis thaliana UVR8 (UV Resistance locus 8)
分子名称: UVB-resistance protein UVR8
著者Arvai, A.S, Christie, J.M, Pratt, A.J, Hitomi, K, Getzoff, E.D.
登録日2012-01-11
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Plant UVR8 Photoreceptor Senses UV-B by Tryptophan-Mediated Disruption of Cross-Dimer Salt Bridges.
Science, 335, 2012
4D0T
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GalNAc-T2 crystal soaked with UDP-GalNAc, EA2 peptide and manganese
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, MANGANESE (II) ION, ...
著者Lira-Navarrete, E, Iglesias-Fernandez, J, Zandberg, W.F, Companon, I, Kong, Y, Corzana, F, Pinto, B.M, Clausen, H, Peregrina, J.M, Vocadlo, D, Rovira, C, Hurtado-Guerrero, R.
登録日2014-04-30
公開日2014-05-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Substrate-Guided Front-Face Reaction Revealed by Combined Structural Snapshots and Metadynamics for the Polypeptide N-Acetylgalactosaminyltransferase 2.
Angew.Chem.Int.Ed.Engl., 53, 2014
4CR2
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Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
著者Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F.
登録日2014-02-25
公開日2014-04-02
最終更新日2018-10-03
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 111, 2014
6FD2
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Radical SAM 1,2-diol dehydratase AprD4 in complex with its substrate paromamine
分子名称: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
著者Liu, W.Q, Amara, P, Mouesca, J.M, Ji, X, Renoux, O, Martin, L, Zhang, C, Zhang, Q, Nicolet, Y.
登録日2017-12-21
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献1,2-Diol Dehydration by the Radical SAM Enzyme AprD4: A Matter of Proton Circulation and Substrate Flexibility.
J. Am. Chem. Soc., 140, 2018
6F62
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Crystal structure of the SYCP1 N-terminal head-to-head assembly in open conformation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Synaptonemal complex protein 1
著者Dunce, J.M, Davies, O.R.
登録日2017-12-04
公開日2018-06-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.066 Å)
主引用文献Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
1WO7
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BU of 1wo7 by Molmil
Solution structure of Designed Functional Finger 7 (DFF7): Designed mutant based on non-native CHANCE domain
分子名称: CREB Binding Protein, ZINC ION
著者Sharpe, B.K, Liew, C.K, Wilce, J.A, Crossley, M, Matthews, J.M, Mackay, J.P.
登録日2004-08-12
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Assessment of the robustness of a serendipitous zinc binding fold: mutagenesis and protein grafting
Structure, 13, 2005
6EVS
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Characterization of 2-deoxyribosyltransferase from psychrotolerant bacterium Bacillus psychrosaccharolyticus: a suitable biocatalyst for the industrial synthesis of antiviral and antitumoral nucleosides
分子名称: N-deoxyribosyltransferase
著者Fresco-Tabohada, A, Fernandez-Lucas, J, Acebal, C, Arroyo, M, Ramon, F, Mancheno, J.M, de la Mata, I.
登録日2017-11-02
公開日2018-11-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献2'-Deoxyribosyltransferase from Bacillus psychrosaccharolyticus: A Mesophilic-Like Biocatalyst for the Synthesis of Modified Nucleosides from a Psychrotolerant Bacterium
Catalysts, 2019
4C07
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Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with CaCl2 at 1.5 Angstroms
分子名称: CALCIUM ION, PROTEIN ARGININE N-METHYLTRANSFERASE 6
著者Bonnefond, L, Cura, V, Troffer-Charlier, N, Mailliot, J, Wurtz, J.M, Cavarelli, J.
登録日2013-07-31
公開日2014-07-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献Functional Insights from High Resolution Structures of Mouse Protein Arginine Methyltransferase 6.
J.Struct.Biol., 191, 2015
3F5V
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C2 Crystal form of mite allergen DER P 1
分子名称: CALCIUM ION, Der p 1 allergen, HEXAETHYLENE GLYCOL
著者Stura, E.A, Minor, W, Chruszcz, M, Saint Remy, J.M.
登録日2008-11-04
公開日2009-02-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structures of mite allergens Der f 1 and Der p 1 reveal differences in surface-exposed residues that may influence antibody binding.
J.Mol.Biol., 386, 2009
2ZXX
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Crystal structure of Cdt1/geminin complex
分子名称: DNA replication factor Cdt1, Geminin
著者Cho, Y, Lee, C, Hong, B.S, Choi, J.M.
登録日2009-01-08
公開日2009-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for inhibition of the replication licensing factor Cdt1 by geminin
Nature, 430, 2004
6F5O
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A mechanism for the activation of the influenza virus transcriptase
分子名称: 3' promoter vRNA, 5' promoter vRNA, Polymerase acidic protein, ...
著者Serna Martin, I, Grimes, J.M.
登録日2017-12-02
公開日2018-06-27
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献A Mechanism for the Activation of the Influenza Virus Transcriptase.
Mol. Cell, 70, 2018
4BLT
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BU of 4blt by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 S292A MUTANT IN COMPLEX WITH AMPcPP
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, NTPASE P4
著者El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
登録日2013-05-04
公開日2013-08-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
6EYO
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Structure of extended IgE-Fc in complex with two anti-IgE Fabs
分子名称: 8D6 Fab heavy chain, 8D6 Fab light chain, Immunoglobulin heavy constant epsilon, ...
著者Chen, J.B, Ramadani, F, Pang, M.O.Y, Beavil, R.L, Holdom, M.D, Mitropoulou, A.N, Beavil, A.J, Gould, H.J, Chang, T.W, Sutton, B.J, McDonnell, J.M, Davies, A.M.
登録日2017-11-13
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural basis for selective inhibition of immunoglobulin E-receptor interactions by an anti-IgE antibody.
Sci Rep, 8, 2018
4EPL
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BU of 4epl by Molmil
Crystal Structure of Arabidopsis thaliana GH3.11 (JAR1) in Complex with JA-Ile
分子名称: Jasmonic acid-amido synthetase JAR1, N-({(1R,2R)-3-oxo-2-[(2Z)-pent-2-en-1-yl]cyclopentyl}acetyl)-L-isoleucine
著者Westfall, C.S, Zubieta, C, Herrmann, J, Kapp, U, Nanao, M.H, Jez, J.M.
登録日2012-04-17
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science, 336, 2012
4ERS
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BU of 4ers by Molmil
A Molecular Basis for Negative Regulation of the Glucagon Receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab heavy chain, Fab light chain, ...
著者Murray, J.M, Koth, C.M, Mukund, S.
登録日2012-04-20
公開日2012-08-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.637 Å)
主引用文献Molecular basis for negative regulation of the glucagon receptor.
Proc.Natl.Acad.Sci.USA, 109, 2012
6F64
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Crystal structure of the SYCP1 C-terminal back-to-back assembly
分子名称: ACETATE ION, Synaptonemal complex protein 1
著者Dunce, J.M, Millan, C, Uson, I, Davies, O.R.
登録日2017-12-04
公開日2018-06-06
最終更新日2020-04-22
実験手法X-RAY DIFFRACTION (2.493 Å)
主引用文献Structural basis of meiotic chromosome synapsis through SYCP1 self-assembly.
Nat. Struct. Mol. Biol., 25, 2018
1X5V
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NMR Structure of PcFK1
分子名称: PcFK1
著者Pimentel, C, Choi, S.J, Chagot, B, Guette, C, Camadro, J.M, Darbon, H.
登録日2005-05-17
公開日2006-04-04
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of PcFK1, a spider peptide active against Plasmodium falciparum
Protein Sci., 15, 2006
4EES
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BU of 4ees by Molmil
Crystal structure of iLOV
分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2
著者Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D.
登録日2012-03-28
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability.
J.Biol.Chem., 287, 2012
6F5P
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A mechanism for the activation of the influenza virus transcriptase
分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, DNA-directed RNA polymerase subunit, MAGNESIUM ION, ...
著者Serna Martin, I, Grimes, J.M.
登録日2017-12-02
公開日2018-09-19
実験手法X-RAY DIFFRACTION (4.14 Å)
主引用文献A Mechanism for the Activation of the Influenza Virus Transcriptase.
Mol. Cell, 70, 2018
4DPQ
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The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana in complex with (S)-lysine
分子名称: Dihydrodipicolinate synthase 2, chloroplastic, LYSINE, ...
著者Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
登録日2012-02-14
公開日2012-07-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
6EYN
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BU of 6eyn by Molmil
Structure of the 8D6 (anti-IgE) Fab
分子名称: 1,2-ETHANEDIOL, 8D6 Fab heavy chain, 8D6 Fab light chain, ...
著者Chen, J.B, Ramadani, F, Pang, M.O.Y, Beavil, R.L, Holdom, M.D, Mitropoulou, A.N, Beavil, A.J, Gould, H.J, Chang, T.W, Sutton, B.J, McDonnell, J.M, Davies, A.M.
登録日2017-11-13
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for selective inhibition of immunoglobulin E-receptor interactions by an anti-IgE antibody.
Sci Rep, 8, 2018
1WBQ
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BU of 1wbq by Molmil
ZnMg substituted aminopeptidase P from E. coli
分子名称: CHLORIDE ION, MAGNESIUM ION, XAA-PRO AMINOPEPTIDASE, ...
著者Graham, S.C, Bond, C.S, Freeman, H.C, Guss, J.M.
登録日2004-11-05
公開日2005-09-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
Biochemistry, 44, 2005
1X8B
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Structure of human Wee1A kinase: kinase domain complexed with inhibitor PD0407824
分子名称: 9-HYDROXY-4-PHENYLPYRROLO[3,4-C]CARBAZOLE-1,3(2H,6H)-DIONE, MAGNESIUM ION, Wee1-like protein kinase
著者Squire, C.J, Dickson, J.M, Ivanovic, I, Baker, E.N.
登録日2004-08-17
公開日2005-06-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure and inhibition of the human cell cycle checkpoint kinase, Wee1A kinase: an atypical tyrosine kinase with a key role in CDK1 regulation
Structure, 13, 2005
2IGZ
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NMR structure of the sterol-dependent antifungal antibiotic bacillomycin Lc
分子名称: BACILLOMYCIN L-3
著者Volpon, L, Tsan, P, Besson, F, Lancelin, J.M.
登録日2006-09-25
公開日2006-10-03
最終更新日2012-12-12
実験手法SOLUTION NMR
主引用文献NMR Structure Determination of a Synthetic Analogue of Bacillomycin Lc Reveals the Strategic Role of L-Asn1 in the Natural Iturinic Antibiotics.
Spectrochim Acta a Mol.Biomol.Spectrosc., 67, 2007
4D0N
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AKAP13 (AKAP-Lbc) RhoGEF domain in complex with RhoA
分子名称: 1,2-ETHANEDIOL, A-KINASE ANCHOR PROTEIN 13, GUANOSINE-5'-DIPHOSPHATE, ...
著者Abdul Azeez, K.R, Shrestha, L, Krojer, T, Allerston, C, von Delft, F, Bountra, C, Arrowsmith, C, Edwards, A.M, Knapp, S, Klussmann, E, Elkins, J.M.
登録日2014-04-29
公開日2014-05-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of the Rhoa : Akap-Lbc Dh-Ph Domain Complex.
Biochem.J., 464, 2014

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